| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343778
Identifier: 146343778
GI number: 146343778
Start: 7327510
End: 7329858
Strand: Reverse
Name: 146343778
Synonym: BRADO7025
Alternate gene names: NA
Gene position: 7329858-7327510 (Counterclockwise)
Preceding gene: 146343779
Following gene: 146343775
Centisome position: 98.3
GC content: 61.86
Gene sequence:
>2349_bases ATGTCGGGAATGGAAGCCGAGCCATTGCGCAGCGCCTACGAGGTTGGAGATCAGCTGCAGACGGCCTTGTTCCGCCGCGG ACGCACGTTCTCCGGCTTCGCCTGCGACCCCTCCGATCCAACCCGCAAATTCGTCATCGAACTCGTCGTCGACGGTTACG TGGTCGCCGTTGGCGTTGCTGATGGCATGGTCGCCCGGCTGCGCGAGGACGGACTCGGAGACGGCCGCTTCGGCTTCACT TTCAGCGTCGCCGACGAGGCCTTGGCGAATGCGACCTGCGTCGAAGCGCGCCTCGCCAATCTGGGTGTTGCCGTTGGCGC GCCGATCTATTGCGACAGCCTGCTGACGGACGAAGCGGAATACGTTCTGGGCGAACTCGAATGGGTGGGTGGTCTTCGCT TTGTCGGCTGGCTTGATCCGGAGCTGGAAGACGACGTTGAGATCGTGGTTGCCGAGCAGCTGGTGATGCTCGTCAAGCCG TCCGGCTGGACGCATGTCGCCCAAGGGGACGGTTTCGAAGCCGCAAAAAGATTAGATTTTCATCTACCGGAGCACTACGC CGACGGACGCGTCCGACAGCTGTCAGCCCGCCTTTCCGATGGCCGCAGCCTCCTTGCACAGGCCTTGCCGTTTGTTGCTT TCGAGCGCGGCCTGGAGCAGACCCTGCAAGTCCTTGGGCGATGGGAGAGTGAGCGTCTTCGCGGCCGCCTGTTCGACCAG CTGGTGCCCGCATCGCTTCCGTTTCATCTCTATGAGAGTTGGAAAGAACGTTTCCCGCCGCCTGGTCCGGTCAGCGGGTC CTTCGAAGCTGCCGTCATCCTGATTGGCGAGTCGGGAGTCGACGAGACCGTCGAGAGCCTCGAAGCACAACGGAACTGTA CCTGGAGTGCGATAAGCCTGCCGACAGCTCGCAGCTTCGCCCGGTTTGATGCCAAGCCGGCCTGGGAGTTCATCGGTGGG GATGCGGCCGGCTGCGAATTCGTCGTGTTCTGCCTCAGCGGCACTTTCGTCACGCCGGACGCCCTGCGGCGTCTTGGCGA GGTATTCGAGGTCGACCGACGCTGTGACGGTGTCTACAGCGATATCGAGATCCAGTCCGACGGCAAACTCTGGCCTTTGA TGTTGCCGGCATTCGATCGGGAGCGCGCCCTCGAGCAGGCCTACGGCGCGTATTTCTTTGCCGTCCGACGAGCGTGTGCT CTGGAGACGCTTCGTTCGGCCATGTCGCTTTACGAGCTGTTTCACGCCTGCGTCGGCAATGAGCTTGCAACCCGCCGTGT CCGTCATCTGCCCGGCGCTCTTGCGATATTGCCGGTCATCGATACGGCGTCCGCAGTCAAGGAGTTGGCGGAGGCCAGCC GGAGCTTCCTGGCCAGGAGCGGAATCCGGGCTGCGGTGTCTCCGCGTGAAAACGGCTCGGTGCCGTCAGTCAGGATCCAG CGCGAGGTGGCCGCGAACGACAGCACCACGATTGTGATCCCGACCCGCAATCGCGGCAAGCTTCTGCAGCGTTGCCTTGA CACGATCGAGCCCGCCGTCCGCAAACTGCAGGCGAAGGTTCTGGTCGTCGACAATGAGTCAACCGAGCCCGAAACCATGG AATATTTGGCTCGGATCGCGGCGCTCGGTGTTGGTGTTCTCCCGGTACCGGGGCATTTCAACTTCGCCCGTATCAACAAT ATTGCCATCCGCCAGGTGGATACGGAGAACGTCTGTCTTCTGAACAACGATATCGAGGCTTTGGACGACGATTGGCTCAG CGAAATGCTATCTCGGCTCAGCGAGCCCAATGTGGGTGCAGTCGGCGCGAAGCTGCTGTGGCCTAACGGGGTTGTTCAGC ATGGCGGCGTCGTGCTCGGTACGAACTTCGCGGCGACCCACGCGTTCAATGATCGGATGGACGGCGATCTTGGCTACGGT GGTCTGCTACAAGTGGCCCACGAATGTTCGGCCGTTACGGCTGCCTGCCTCTTGATCCGCAAGCGCGACTACGACGCCGT GCAGGGCATGGACGAGGTTCGTTTCCCCGTGAATTTCAACGACGTCGATCTCTGCCTTAAGCTGCGGCAGCTCGGCAAAC GTATCGTGATAACACCCGATGCACGATTGACCCATCTCGAGTCAGTCAGCCGCGGCCGCGACACGTCTCCGGATCGCAAG GCCCGCTTCGAGCGAGAGCTCCTGAACTTGCGTATCAAGTGGGGGGATGCCTTGATGGACGATCCCTATTATCATCCGCT TCTCGGGCTCGATCATCCACCGTTCTCGGCGCTCGCCTGGCCACCGCGTTCCTGGGCGTCGCGCGTCAACAGGCGGCCTC ATCCTGAAGCGGCTCCGCCGGGATTTTGA
Upstream 100 bases:
>100_bases CGCTGACGGGCCGTTCGCCCAAGCCTGTTGTCTTTTCCCAGGGGATCGGCAAAGACCACGGCTGCCACCCGTCGACGCGA GCGGGTGGCATGGGGACGAC
Downstream 100 bases:
>100_bases GCTCGGCAGATGCCGGCTGCAGCCAGCGGATGATTTGTGCAACGGCCTTCGAAGCCGGCAGGCCGGGCGCGATGACAAGG TTGTGTTCGCTGGCGTCCGC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 782; Mature: 781
Protein sequence:
>782_residues MSGMEAEPLRSAYEVGDQLQTALFRRGRTFSGFACDPSDPTRKFVIELVVDGYVVAVGVADGMVARLREDGLGDGRFGFT FSVADEALANATCVEARLANLGVAVGAPIYCDSLLTDEAEYVLGELEWVGGLRFVGWLDPELEDDVEIVVAEQLVMLVKP SGWTHVAQGDGFEAAKRLDFHLPEHYADGRVRQLSARLSDGRSLLAQALPFVAFERGLEQTLQVLGRWESERLRGRLFDQ LVPASLPFHLYESWKERFPPPGPVSGSFEAAVILIGESGVDETVESLEAQRNCTWSAISLPTARSFARFDAKPAWEFIGG DAAGCEFVVFCLSGTFVTPDALRRLGEVFEVDRRCDGVYSDIEIQSDGKLWPLMLPAFDRERALEQAYGAYFFAVRRACA LETLRSAMSLYELFHACVGNELATRRVRHLPGALAILPVIDTASAVKELAEASRSFLARSGIRAAVSPRENGSVPSVRIQ REVAANDSTTIVIPTRNRGKLLQRCLDTIEPAVRKLQAKVLVVDNESTEPETMEYLARIAALGVGVLPVPGHFNFARINN IAIRQVDTENVCLLNNDIEALDDDWLSEMLSRLSEPNVGAVGAKLLWPNGVVQHGGVVLGTNFAATHAFNDRMDGDLGYG GLLQVAHECSAVTAACLLIRKRDYDAVQGMDEVRFPVNFNDVDLCLKLRQLGKRIVITPDARLTHLESVSRGRDTSPDRK ARFERELLNLRIKWGDALMDDPYYHPLLGLDHPPFSALAWPPRSWASRVNRRPHPEAAPPGF
Sequences:
>Translated_782_residues MSGMEAEPLRSAYEVGDQLQTALFRRGRTFSGFACDPSDPTRKFVIELVVDGYVVAVGVADGMVARLREDGLGDGRFGFT FSVADEALANATCVEARLANLGVAVGAPIYCDSLLTDEAEYVLGELEWVGGLRFVGWLDPELEDDVEIVVAEQLVMLVKP SGWTHVAQGDGFEAAKRLDFHLPEHYADGRVRQLSARLSDGRSLLAQALPFVAFERGLEQTLQVLGRWESERLRGRLFDQ LVPASLPFHLYESWKERFPPPGPVSGSFEAAVILIGESGVDETVESLEAQRNCTWSAISLPTARSFARFDAKPAWEFIGG DAAGCEFVVFCLSGTFVTPDALRRLGEVFEVDRRCDGVYSDIEIQSDGKLWPLMLPAFDRERALEQAYGAYFFAVRRACA LETLRSAMSLYELFHACVGNELATRRVRHLPGALAILPVIDTASAVKELAEASRSFLARSGIRAAVSPRENGSVPSVRIQ REVAANDSTTIVIPTRNRGKLLQRCLDTIEPAVRKLQAKVLVVDNESTEPETMEYLARIAALGVGVLPVPGHFNFARINN IAIRQVDTENVCLLNNDIEALDDDWLSEMLSRLSEPNVGAVGAKLLWPNGVVQHGGVVLGTNFAATHAFNDRMDGDLGYG GLLQVAHECSAVTAACLLIRKRDYDAVQGMDEVRFPVNFNDVDLCLKLRQLGKRIVITPDARLTHLESVSRGRDTSPDRK ARFERELLNLRIKWGDALMDDPYYHPLLGLDHPPFSALAWPPRSWASRVNRRPHPEAAPPGF >Mature_781_residues SGMEAEPLRSAYEVGDQLQTALFRRGRTFSGFACDPSDPTRKFVIELVVDGYVVAVGVADGMVARLREDGLGDGRFGFTF SVADEALANATCVEARLANLGVAVGAPIYCDSLLTDEAEYVLGELEWVGGLRFVGWLDPELEDDVEIVVAEQLVMLVKPS GWTHVAQGDGFEAAKRLDFHLPEHYADGRVRQLSARLSDGRSLLAQALPFVAFERGLEQTLQVLGRWESERLRGRLFDQL VPASLPFHLYESWKERFPPPGPVSGSFEAAVILIGESGVDETVESLEAQRNCTWSAISLPTARSFARFDAKPAWEFIGGD AAGCEFVVFCLSGTFVTPDALRRLGEVFEVDRRCDGVYSDIEIQSDGKLWPLMLPAFDRERALEQAYGAYFFAVRRACAL ETLRSAMSLYELFHACVGNELATRRVRHLPGALAILPVIDTASAVKELAEASRSFLARSGIRAAVSPRENGSVPSVRIQR EVAANDSTTIVIPTRNRGKLLQRCLDTIEPAVRKLQAKVLVVDNESTEPETMEYLARIAALGVGVLPVPGHFNFARINNI AIRQVDTENVCLLNNDIEALDDDWLSEMLSRLSEPNVGAVGAKLLWPNGVVQHGGVVLGTNFAATHAFNDRMDGDLGYGG LLQVAHECSAVTAACLLIRKRDYDAVQGMDEVRFPVNFNDVDLCLKLRQLGKRIVITPDARLTHLESVSRGRDTSPDRKA RFERELLNLRIKWGDALMDDPYYHPLLGLDHPPFSALAWPPRSWASRVNRRPHPEAAPPGF
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 86187; Mature: 86056
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGMEAEPLRSAYEVGDQLQTALFRRGRTFSGFACDPSDPTRKFVIELVVDGYVVAVGVA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECH DGMVARLREDGLGDGRFGFTFSVADEALANATCVEARLANLGVAVGAPIYCDSLLTDEAE HHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCHH YVLGELEWVGGLRFVGWLDPELEDDVEIVVAEQLVMLVKPSGWTHVAQGDGFEAAKRLDF HHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHEECCCCCEECCCCCCHHHHHHHCC HLPEHYADGRVRQLSARLSDGRSLLAQALPFVAFERGLEQTLQVLGRWESERLRGRLFDQ CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LVPASLPFHLYESWKERFPPPGPVSGSFEAAVILIGESGVDETVESLEAQRNCTWSAISL HCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEC PTARSFARFDAKPAWEFIGGDAAGCEFVVFCLSGTFVTPDALRRLGEVFEVDRRCDGVYS CCHHHHHHCCCCCCHHHCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC DIEIQSDGKLWPLMLPAFDRERALEQAYGAYFFAVRRACALETLRSAMSLYELFHACVGN CEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ELATRRVRHLPGALAILPVIDTASAVKELAEASRSFLARSGIRAAVSPRENGSVPSVRIQ HHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEE REVAANDSTTIVIPTRNRGKLLQRCLDTIEPAVRKLQAKVLVVDNESTEPETMEYLARIA EHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHH ALGVGVLPVPGHFNFARINNIAIRQVDTENVCLLNNDIEALDDDWLSEMLSRLSEPNVGA HHCCCEEECCCCCCCEEECCEEEEEECCCCEEEECCCHHHCCHHHHHHHHHHHCCCCCCC VGAKLLWPNGVVQHGGVVLGTNFAATHAFNDRMDGDLGYGGLLQVAHECSAVTAACLLIR CCCEEECCCCCHHCCCEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KRDYDAVQGMDEVRFPVNFNDVDLCLKLRQLGKRIVITPDARLTHLESVSRGRDTSPDRK CCCCHHHCCHHHEECCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCCCHHH ARFERELLNLRIKWGDALMDDPYYHPLLGLDHPPFSALAWPPRSWASRVNRRPHPEAAPP HHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC GF CC >Mature Secondary Structure SGMEAEPLRSAYEVGDQLQTALFRRGRTFSGFACDPSDPTRKFVIELVVDGYVVAVGVA CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECH DGMVARLREDGLGDGRFGFTFSVADEALANATCVEARLANLGVAVGAPIYCDSLLTDEAE HHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHCCCHH YVLGELEWVGGLRFVGWLDPELEDDVEIVVAEQLVMLVKPSGWTHVAQGDGFEAAKRLDF HHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHEECCCCCEECCCCCCHHHHHHHCC HLPEHYADGRVRQLSARLSDGRSLLAQALPFVAFERGLEQTLQVLGRWESERLRGRLFDQ CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LVPASLPFHLYESWKERFPPPGPVSGSFEAAVILIGESGVDETVESLEAQRNCTWSAISL HCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEC PTARSFARFDAKPAWEFIGGDAAGCEFVVFCLSGTFVTPDALRRLGEVFEVDRRCDGVYS CCHHHHHHCCCCCCHHHCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC DIEIQSDGKLWPLMLPAFDRERALEQAYGAYFFAVRRACALETLRSAMSLYELFHACVGN CEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ELATRRVRHLPGALAILPVIDTASAVKELAEASRSFLARSGIRAAVSPRENGSVPSVRIQ HHHHHHHHHCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEE REVAANDSTTIVIPTRNRGKLLQRCLDTIEPAVRKLQAKVLVVDNESTEPETMEYLARIA EHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHH ALGVGVLPVPGHFNFARINNIAIRQVDTENVCLLNNDIEALDDDWLSEMLSRLSEPNVGA HHCCCEEECCCCCCCEEECCEEEEEECCCCEEEECCCHHHCCHHHHHHHHHHHCCCCCCC VGAKLLWPNGVVQHGGVVLGTNFAATHAFNDRMDGDLGYGGLLQVAHECSAVTAACLLIR CCCEEECCCCCHHCCCEEEECCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KRDYDAVQGMDEVRFPVNFNDVDLCLKLRQLGKRIVITPDARLTHLESVSRGRDTSPDRK CCCCHHHCCHHHEECCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCCCHHH ARFERELLNLRIKWGDALMDDPYYHPLLGLDHPPFSALAWPPRSWASRVNRRPHPEAAPP HHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC GF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]