| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343732
Identifier: 146343732
GI number: 146343732
Start: 7272021
End: 7272944
Strand: Direct
Name: 146343732
Synonym: BRADO6979
Alternate gene names: NA
Gene position: 7272021-7272944 (Clockwise)
Preceding gene: 146343727
Following gene: 146343734
Centisome position: 97.52
GC content: 67.64
Gene sequence:
>924_bases GTGTCGCCGCCGGTGTCGCTCCGGTTCGATCGCAGCGTGGTTGACCTTGCTCCGCGCCGGTGGCTCGATGCCGCCGGGGC CGATCAACGGCACCTCAGCGAACGGGACGACATCATGGGGAACGCCGCCGAGATCTACGCGCTGCGCTATGCGACGATGG GGTCGCGCAGCCTGCACATGAACTTCCTGCAGCCCGATCCGCACGACACGACGGCGCAGGACCTCGATTACTTCGTCTGG CTGATTCGCATCGACGGCCGCGACATCCTGGTCGATACCGGCTTCAATGCCACGGAGGCGCAGGCCCGCAACCGCAAGCT GACCCGAAATCCAGTCGATGCGCTCGAGGCGTTCGGCGTGCGCGCCGCCGACATCCGCGACATCATCGTCACGCATCTGC ACTACGACCATGCCGGCAATCTCGACCGCTTCCCGAACGCGCGCTTCCACCTGCAGGAGCGCGAGATGGCCTATGCGACG GGCCGCTGCATGTGCAACGGCCTGTTGCGCCACCCGTTCTCGGTCGAACACGTCACCACCATGGTGCGGCACGTCTATGG CGAGCGCGTCGCGTTTCACGCCGGCGACGGCGAGATCGCGCCGGGAATCACCGTGCACCGGGTCGGCGGCCATTCCGACG GGCTGCAGGTGGTGCGGGTCGAGACCGCGCGCGGGCCGGTCGTGCTGGCCTCCGACGCCGCGCACTACTACGCCAACCTG CAGCGCCGCAGCCCGTTTCCGATCGTCTACAATGTCGGCGACATGGCCCAGGGCTGGGAGACCATCGAGCGCCTCGCAGG CCATCCGGACCGGTTCATCCCCGGCCACGATCCGCTGGTGACCGAGCTGTACCCGCGGGTGAATGACGCGGCCGATGCGT ATGCGCTGCACGTGGTGCCCAAGCGGTCGTTTGCGACGTCGTAA
Upstream 100 bases:
>100_bases AGCGGCCATCGCCGGCGAAAGCATCTCGCGATCCCCGCTTCGACGACATGACCGACCATGCAGCGATACCGGCGTCTCGT AATGTGAGGAGCCTCACGCT
Downstream 100 bases:
>100_bases TTTTTGCCAGGCCGACGCCTCGATGAAGGCGCGGCCGCCCGTCACATCAACGATCCCGTAGGGTGGGCAAGGGCGCGTTG CGCAGTTCACTCTGCGCCCA
Product: putative Zn-dependent hydrolase
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase-Like; Metallo-Beta-Lactamase Family Protein; Hydrolase; Metallo-Beta-Lactamase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like Protein YtnP; Zn-Dependent Hydrolases Including Glyoxylases; Beta-Lactamase Class B
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHMNFLQPDPHDTTAQDLDYFVW LIRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGVRAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYAT GRCMCNGLLRHPFSVEHVTTMVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANL QRRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVPKRSFATS
Sequences:
>Translated_307_residues MSPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHMNFLQPDPHDTTAQDLDYFVW LIRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGVRAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYAT GRCMCNGLLRHPFSVEHVTTMVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANL QRRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVPKRSFATS >Mature_306_residues SPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHMNFLQPDPHDTTAQDLDYFVWL IRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGVRAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYATG RCMCNGLLRHPFSVEHVTTMVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANLQ RRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVPKRSFATS
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34437; Mature: 34306
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHM CCCCCCEEECCHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCHHHEEEEEEHHCCCCEEEE NFLQPDPHDTTAQDLDYFVWLIRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGV EECCCCCCCCCHHHHEEEEEEEEECCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHCC RAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYATGRCMCNGLLRHPFSVEHVTT CHHHHHHHHHHHEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHH MVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANL HHHHHHCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCCHHHHHHH QRRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVP HCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEE KRSFATS CCCCCCC >Mature Secondary Structure SPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHM CCCCCEEECCHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCHHHEEEEEEHHCCCCEEEE NFLQPDPHDTTAQDLDYFVWLIRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGV EECCCCCCCCCHHHHEEEEEEEEECCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHCC RAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYATGRCMCNGLLRHPFSVEHVTT CHHHHHHHHHHHEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHH MVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANL HHHHHHCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCCHHHHHHH QRRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVP HCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEE KRSFATS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA