Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146343734

Identifier: 146343734

GI number: 146343734

Start: 7274611

End: 7275468

Strand: Direct

Name: 146343734

Synonym: BRADO6981

Alternate gene names: NA

Gene position: 7274611-7275468 (Clockwise)

Preceding gene: 146343732

Following gene: 146343736

Centisome position: 97.56

GC content: 70.4

Gene sequence:

>858_bases
TTGTCACGTCCGCTGGCGCTGGCCGCCGCAAGCCTGATGGCGCTGACCCAGGCAGCCCCCGCCGCCGACACTGCCGAGGC
GCCGAAGGGCGCCGCGGTCAGCGTGCTCAAGGCAACCAAGGCCTGTTTCGACAACACCGTCGAAGTGTCGGGCATGGTGC
TCGCCCGCGATGAGACCGCGATCCGGCCGGACCGGCCCGGACTGAAGGTCGCCGAGGTGATGGTCGATGCCGGCGACACC
GTCACGGCCGGGCAGAACCTGGCGCGGCTGACGCCGCCCGAGGGCGGCACGATCATGGTGCAGGCGCCGGTCGCCGGCAC
CATTCTGGCGTCCACCGCCACCATCGGCGCGCTGGCCTCGGGACGCGGTGAGGCGCTGTTCTCGATCATCGCCCGCAACG
AATATGATCTCGTCGGGCTGGTGCCGTCAGCCCAGATCGGCAAGCTCGCGGTCAATCAGCCGGCGCGGATCCGCATCGTC
GGTGCCGGCGAGGTCGACGGCAAGATCCGCCGCGTCGCGCCGACGGTCGAGCCGAACAGCCAGCTCGGCCAGGCCTTCAT
CGCCATCACCGGCACGACCCGGCTGCTGGTGAATTCGTTCGGCCGCGCGGTGATCAAGATCGGGCAGAGCTGCGGGGTCG
CGGTGCCGCTGACGGCCATTCTCTATGATGCCGACGGCACCGTCGTGCAGGTGGTGCGCGCCCAGCGGATCGAGACCAAG
CGCGTCGAGATCGGCCTGATGGCCGGCGGCCAGGTCGAGATCAAGGACGGGCTCGCCGAGGGCGAGATCATCGTCACCCG
CGCCGGCGCCCTGCTGCGCGAAGGCGACCCGGTTCGCCCGGTGATGGCGAGCAATTGA

Upstream 100 bases:

>100_bases
TCGCGCGTCTGCTATCCCGGCGATGACCGCGTCACGAATTGCGTTCGCGAAGGATCGGTGTCGCATGGGACAGTCCGGAA
TTGCCGTCTTGCTTGGCGCG

Downstream 100 bases:

>100_bases
GGGGCGGCACGGCCGGCGGCAGACGCCGTCCACCCCGCCCCGGAGGCCCGAGCCATCGCATTTGACGATCGCAGTTTTGC
ACGCGATCTTGCCTCGTCGT

Product: putative signal peptide

Products: NA

Alternate protein names: Secretion Protein HlyD; Efflux Transporter RND Family MFP Subunit; HlyD Family Secretion Protein; RND Efflux Membrane Fusion Protein; Multidrug RND Transporter Membrane Fusion Protein; Protein Secretion Protein; Component Of Multidrug Efflux System; Signal Peptide; Membrane Fusion Protein; Efflux Protein; Transcriptional Regulator Fis Family; Secretion Protein; Secretion HlyD Protein; Efflux Transporter Rnd Family Mfp Subunit; RND Family Efflux Transporter; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSRPLALAAASLMALTQAAPAADTAEAPKGAAVSVLKATKACFDNTVEVSGMVLARDETAIRPDRPGLKVAEVMVDAGDT
VTAGQNLARLTPPEGGTIMVQAPVAGTILASTATIGALASGRGEALFSIIARNEYDLVGLVPSAQIGKLAVNQPARIRIV
GAGEVDGKIRRVAPTVEPNSQLGQAFIAITGTTRLLVNSFGRAVIKIGQSCGVAVPLTAILYDADGTVVQVVRAQRIETK
RVEIGLMAGGQVEIKDGLAEGEIIVTRAGALLREGDPVRPVMASN

Sequences:

>Translated_285_residues
MSRPLALAAASLMALTQAAPAADTAEAPKGAAVSVLKATKACFDNTVEVSGMVLARDETAIRPDRPGLKVAEVMVDAGDT
VTAGQNLARLTPPEGGTIMVQAPVAGTILASTATIGALASGRGEALFSIIARNEYDLVGLVPSAQIGKLAVNQPARIRIV
GAGEVDGKIRRVAPTVEPNSQLGQAFIAITGTTRLLVNSFGRAVIKIGQSCGVAVPLTAILYDADGTVVQVVRAQRIETK
RVEIGLMAGGQVEIKDGLAEGEIIVTRAGALLREGDPVRPVMASN
>Mature_284_residues
SRPLALAAASLMALTQAAPAADTAEAPKGAAVSVLKATKACFDNTVEVSGMVLARDETAIRPDRPGLKVAEVMVDAGDTV
TAGQNLARLTPPEGGTIMVQAPVAGTILASTATIGALASGRGEALFSIIARNEYDLVGLVPSAQIGKLAVNQPARIRIVG
AGEVDGKIRRVAPTVEPNSQLGQAFIAITGTTRLLVNSFGRAVIKIGQSCGVAVPLTAILYDADGTVVQVVRAQRIETKR
VEIGLMAGGQVEIKDGLAEGEIIVTRAGALLREGDPVRPVMASN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29205; Mature: 29074

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPLALAAASLMALTQAAPAADTAEAPKGAAVSVLKATKACFDNTVEVSGMVLARDETA
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECEEEEECCCCC
IRPDRPGLKVAEVMVDAGDTVTAGQNLARLTPPEGGTIMVQAPVAGTILASTATIGALAS
CCCCCCCCEEEEEEECCCCEEECCCCCEEECCCCCCEEEEECCCCCEEEHHHHHHHHHCC
GRGEALFSIIARNEYDLVGLVPSAQIGKLAVNQPARIRIVGAGEVDGKIRRVAPTVEPNS
CCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCCCH
QLGQAFIAITGTTRLLVNSFGRAVIKIGQSCGVAVPLTAILYDADGTVVQVVRAQRIETK
HHCEEEEEEECHHHHHHHHHCHHEEHHCCCCCCEEEEEEEEECCCCCEEEHHHHHHCCEE
RVEIGLMAGGQVEIKDGLAEGEIIVTRAGALLREGDPVRPVMASN
EEEEEEEECCEEEEECCCCCCCEEEEECCHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SRPLALAAASLMALTQAAPAADTAEAPKGAAVSVLKATKACFDNTVEVSGMVLARDETA
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEECEEEEECCCCC
IRPDRPGLKVAEVMVDAGDTVTAGQNLARLTPPEGGTIMVQAPVAGTILASTATIGALAS
CCCCCCCCEEEEEEECCCCEEECCCCCEEECCCCCCEEEEECCCCCEEEHHHHHHHHHCC
GRGEALFSIIARNEYDLVGLVPSAQIGKLAVNQPARIRIVGAGEVDGKIRRVAPTVEPNS
CCCCEEEEEECCCCCCEEEECCCCCCCEEEECCCCEEEEEECCCCCCEEEEECCCCCCCH
QLGQAFIAITGTTRLLVNSFGRAVIKIGQSCGVAVPLTAILYDADGTVVQVVRAQRIETK
HHCEEEEEEECHHHHHHHHHCHHEEHHCCCCCCEEEEEEEEECCCCCEEEHHHHHHCCEE
RVEIGLMAGGQVEIKDGLAEGEIIVTRAGALLREGDPVRPVMASN
EEEEEEEECCEEEEECCCCCCCEEEEECCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA