| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cutL [H]
Identifier: 146343712
GI number: 146343712
Start: 7243263
End: 7245608
Strand: Direct
Name: cutL [H]
Synonym: BRADO6958
Alternate gene names: 146343712
Gene position: 7243263-7245608 (Clockwise)
Preceding gene: 146343711
Following gene: 146343713
Centisome position: 97.14
GC content: 66.97
Gene sequence:
>2346_bases ATGGGTATGGAAGGCATTGGCGCAAGCGTCGTCCGCAAGGAGGACAAGCGTTTCATCACCGGCAAGGGCCGGTATGTCGA CGACATCAAGCTGGTGGGCATGACTTATGCCCATTTCATCCGCAGCCCGCACGCTCACGCCAAGGTCAAGAGCATCGATC CCTCGGCCGCCGAGGCGATGCCGGGCGTGGTCGCGGTGCTGACCGGCAAGCAGATCGTCGACGACAAGGTCGGCAACCTA ATCTGCGGCTGGGCCATCACCTCCAAGGACGGCTCGCCGATGAAGATGGGCGCATGGCCGGCGATGGCGCCGGAGACCGT GCGCTTCGTCGGCCAGGCCGTCGCCGTCGTGATCGCCGACAGCAAGAACCTGGCGCGTGACGCGGCCGAAGCCGTCGTCG TGGAGTACGAGGAGCTGCCGGCCGTGGCCGACATGCCCTCCGCGCTGAAGCCCGGCGCGCCGCAGCTGCATCCTGAGGCC CCCGGCAACGTCGTCTATGACTGGCACATCGGCGACGAGGCCGCGGTCAGCGCCGCGTTCTCCAAGGCCGCTCACGTCGT CAGCCTGGAGCTGACCAACAACCGGCTGGCGCCCAACGCGATGGAGCCGCGCGCGGCGATCGCCGACTACGACGCCGCCG AGGAGCACTTCACGCTCTACACGACGTCACAGAACCCGCACGTCGCTCGCCTCGTACTGTCGGCGTTCTACAACATCGCG CCCGAGCACAAGCTGCGCGTGATCGCGCCCGACGTCGGCGGCGGCTTCGGCTCCAAGATCTTCATCTATCCCGAAGAGAT GGTGGCGCTGTGGGCCTCGAAGAAGGTCGGCCGCCCGGTGAAGTGGACCGGCGATCGCACCGAGGCGTTCCTGACCGACG CGCATGGCCGCGACCACATCTCCAAGGCCGAGATGGCGTTCGATGCCGACCACAAGATGCTGGGCCTGCGGGTCAAGACC CACGCCAATTTCGGCGCCTACATGTCGCTGTTCTCGTCGTCGGTGCCGACCTATCTGTACGCGACCCTGCTGTCGGGCCA GTACAACATCCCGGCGATCTATGCCGAGGTGATGGGCGTCTATACCAACACCACGCCGGTCGACGCCTATCGCGGCGCGG GCCGTCCCGAAGCGAGCTATCTCCTGGAGCGGCTGGTCGAGACCGCGGCGCGCCAGTTCAAGGTCGACCCGGCGGAGCTG CGGCGGAAGAACTTCATCACGCAGTTCCCGCACCAGACCCCGGTGATCATGGCCTACGACACCGGTGACTTCAACGCCTC GCTCGACGCGGCGCTGAAGGCGATCGACTATGCCGGCTTCGCAGGCCGCAAGGCCGCCGCCAAGGCGCAGGGCAAGCTGC GCGGCATCGGCTTCTCCTGCTACATCGAGGCCTGCGGCATCGCGCCGTCGAAGGCGGTCGGCAGCCTGGGCGCCGGCGTC GGCCTGTGGGAATCGGCCGAGATCCGCGTCAACCCGGTCGGCACCATCGAGGTGCTCACGGGATCGCACAGCCACGGCCA GGGCCACGAGACCACCTTCTGCCAGCTGATCGCGGACCGCCTGGGCGTGCCGATCAGCCAGGTCTCGATCGTCCATGGCG ACACGGACAAGGTGCAGTTCGGCATGGGCACCTACGGCTCGCGCTCGGCGGCCGTCGGTCTCACCGCGATCCTGAAGGCG ATGGAGAAGGTCGAGGCCAAGGCCAAGAAGATCGCGGCACATGCGCTCGAGGCGTCGGAAGGCGACATCGTCATCGAGAA CGGCGAGTTCAAGGTGACCGGCACCGACAAGTCGATCGCGCTGCCGATGGTCGCGCTCGCCGCCTACACCGCGCATAATC TGCCTGACGGGATGGAGCCCGGATTGAAGGAGAGCGCCTTCTACGATCCGACCAACTTCACCTTCCCGGCCGGCACCTAC ATCTGCGAGCTTGAGGTCGACCAGGCCACCGGCAAGACGTCGTTCGTCAACTTTGTCGCGGCGGACGACTTCGGCCGGCT GATCAACCCGATGATCGTGGAGGGCCAAGTGCACGGTGGTCTCGTCCAGGGCATCGGCCAGGCGCTGCTGGAGCATGCCG TCTATGACGGCAACGGCCAGCCGGTCACGGCGTCCTTCATGGACTACGCGATGCCGCGCGCCGACGACGTGCCGTCGTTC AAGCTGAGCCACACCACCACGCTCTGCCCGGGCAACCCGCTCGGCGTGAAGGGCTGCGGCGAGGCCGGCGCGATCGGCGC CTCGGCGGCCGTGATCAACGCGATCACGGATGCGATCGGCAACAACAAGCTCGAAATGCCGGCGACCCCGGACCGCGTCT GGCACGCGATCCACGGCAACGCCTGA
Upstream 100 bases:
>100_bases GGCCGTCGGCTTTCGACGTCCTTCAATCAATACCGAGACCACGACCGCTGCGCGCGATGGCCGCGGCGGGACAACAAACT CCGGTAGGGGAGAGATTCGC
Downstream 100 bases:
>100_bases TCGAACGGGAGGAGCAACCATGTACGAGACGACCTATCATCGCGCCTCCTCGGTCGACGAGGCCGCAGCGCTGTTCTCCA AGGGTAGCGAGGCCAAGTTC
Product: putative carbon-monoxide dehydrogenase large subunit, coxL-like protein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 781; Mature: 780
Protein sequence:
>781_residues MGMEGIGASVVRKEDKRFITGKGRYVDDIKLVGMTYAHFIRSPHAHAKVKSIDPSAAEAMPGVVAVLTGKQIVDDKVGNL ICGWAITSKDGSPMKMGAWPAMAPETVRFVGQAVAVVIADSKNLARDAAEAVVVEYEELPAVADMPSALKPGAPQLHPEA PGNVVYDWHIGDEAAVSAAFSKAAHVVSLELTNNRLAPNAMEPRAAIADYDAAEEHFTLYTTSQNPHVARLVLSAFYNIA PEHKLRVIAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRTEAFLTDAHGRDHISKAEMAFDADHKMLGLRVKT HANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYAEVMGVYTNTTPVDAYRGAGRPEASYLLERLVETAARQFKVDPAEL RRKNFITQFPHQTPVIMAYDTGDFNASLDAALKAIDYAGFAGRKAAAKAQGKLRGIGFSCYIEACGIAPSKAVGSLGAGV GLWESAEIRVNPVGTIEVLTGSHSHGQGHETTFCQLIADRLGVPISQVSIVHGDTDKVQFGMGTYGSRSAAVGLTAILKA MEKVEAKAKKIAAHALEASEGDIVIENGEFKVTGTDKSIALPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGTY ICELEVDQATGKTSFVNFVAADDFGRLINPMIVEGQVHGGLVQGIGQALLEHAVYDGNGQPVTASFMDYAMPRADDVPSF KLSHTTTLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIHGNA
Sequences:
>Translated_781_residues MGMEGIGASVVRKEDKRFITGKGRYVDDIKLVGMTYAHFIRSPHAHAKVKSIDPSAAEAMPGVVAVLTGKQIVDDKVGNL ICGWAITSKDGSPMKMGAWPAMAPETVRFVGQAVAVVIADSKNLARDAAEAVVVEYEELPAVADMPSALKPGAPQLHPEA PGNVVYDWHIGDEAAVSAAFSKAAHVVSLELTNNRLAPNAMEPRAAIADYDAAEEHFTLYTTSQNPHVARLVLSAFYNIA PEHKLRVIAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRTEAFLTDAHGRDHISKAEMAFDADHKMLGLRVKT HANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYAEVMGVYTNTTPVDAYRGAGRPEASYLLERLVETAARQFKVDPAEL RRKNFITQFPHQTPVIMAYDTGDFNASLDAALKAIDYAGFAGRKAAAKAQGKLRGIGFSCYIEACGIAPSKAVGSLGAGV GLWESAEIRVNPVGTIEVLTGSHSHGQGHETTFCQLIADRLGVPISQVSIVHGDTDKVQFGMGTYGSRSAAVGLTAILKA MEKVEAKAKKIAAHALEASEGDIVIENGEFKVTGTDKSIALPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGTY ICELEVDQATGKTSFVNFVAADDFGRLINPMIVEGQVHGGLVQGIGQALLEHAVYDGNGQPVTASFMDYAMPRADDVPSF KLSHTTTLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIHGNA >Mature_780_residues GMEGIGASVVRKEDKRFITGKGRYVDDIKLVGMTYAHFIRSPHAHAKVKSIDPSAAEAMPGVVAVLTGKQIVDDKVGNLI CGWAITSKDGSPMKMGAWPAMAPETVRFVGQAVAVVIADSKNLARDAAEAVVVEYEELPAVADMPSALKPGAPQLHPEAP GNVVYDWHIGDEAAVSAAFSKAAHVVSLELTNNRLAPNAMEPRAAIADYDAAEEHFTLYTTSQNPHVARLVLSAFYNIAP EHKLRVIAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRTEAFLTDAHGRDHISKAEMAFDADHKMLGLRVKTH ANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYAEVMGVYTNTTPVDAYRGAGRPEASYLLERLVETAARQFKVDPAELR RKNFITQFPHQTPVIMAYDTGDFNASLDAALKAIDYAGFAGRKAAAKAQGKLRGIGFSCYIEACGIAPSKAVGSLGAGVG LWESAEIRVNPVGTIEVLTGSHSHGQGHETTFCQLIADRLGVPISQVSIVHGDTDKVQFGMGTYGSRSAAVGLTAILKAM EKVEAKAKKIAAHALEASEGDIVIENGEFKVTGTDKSIALPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGTYI CELEVDQATGKTSFVNFVAADDFGRLINPMIVEGQVHGGLVQGIGQALLEHAVYDGNGQPVTASFMDYAMPRADDVPSFK LSHTTTLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIHGNA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=793, Percent_Identity=24.8423707440101, Blast_Score=154, Evalue=4e-37, Organism=Homo sapiens, GI91823271, Length=792, Percent_Identity=25.7575757575758, Blast_Score=149, Evalue=9e-36, Organism=Escherichia coli, GI1789230, Length=770, Percent_Identity=28.4415584415584, Blast_Score=259, Evalue=6e-70, Organism=Escherichia coli, GI1789246, Length=820, Percent_Identity=26.0975609756098, Blast_Score=209, Evalue=6e-55, Organism=Escherichia coli, GI1786478, Length=749, Percent_Identity=25.3671562082777, Blast_Score=119, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17540638, Length=796, Percent_Identity=23.4924623115578, Blast_Score=142, Evalue=9e-34, Organism=Caenorhabditis elegans, GI17539860, Length=793, Percent_Identity=24.968474148802, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI32566215, Length=781, Percent_Identity=23.303457106274, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI17737937, Length=789, Percent_Identity=26.1089987325729, Blast_Score=138, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 83029; Mature: 82898
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS00969 ANTENNA_COMP_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMEGIGASVVRKEDKRFITGKGRYVDDIKLVGMTYAHFIRSPHAHAKVKSIDPSAAEAM CCCCCCCHHHHHHCCCEEEECCCCEECCEEEHHHHHHHHHCCCCCCCEEECCCCHHHHHC PGVVAVLTGKQIVDDKVGNLICGWAITSKDGSPMKMGAWPAMAPETVRFVGQAVAVVIAD CCEEEEECCCHHHHHHHCCEEEEEEEECCCCCCEEECCCCCCCHHHHHHHHHEEEEEEEC SKNLARDAAEAVVVEYEELPAVADMPSALKPGAPQLHPEAPGNVVYDWHIGDEAAVSAAF CCHHHHHHHHHEEEEHHHCCCHHCCCHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH SKAAHVVSLELTNNRLAPNAMEPRAAIADYDAAEEHFTLYTTSQNPHVARLVLSAFYNIA HHCEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC PEHKLRVIAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRTEAFLTDAHGRDHI CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHH SKAEMAFDADHKMLGLRVKTHANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYAEVMGV HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHH YTNTTPVDAYRGAGRPEASYLLERLVETAARQFKVDPAELRRKNFITQFPHQTPVIMAYD CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEE TGDFNASLDAALKAIDYAGFAGRKAAAKAQGKLRGIGFSCYIEACGIAPSKAVGSLGAGV CCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCEEEEEEECCCCCHHHHHHCCCCC GLWESAEIRVNPVGTIEVLTGSHSHGQGHETTFCQLIADRLGVPISQVSIVHGDTDKVQF CCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEECCCCCEEE GMGTYGSRSAAVGLTAILKAMEKVEAKAKKIAAHALEASEGDIVIENGEFKVTGTDKSIA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCHH LPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGTYICELEVDQATGKTSFVNFVA HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEE ADDFGRLINPMIVEGQVHGGLVQGIGQALLEHAVYDGNGQPVTASFMDYAMPRADDVPSF CCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHEECCCCCEEEHHHHHHCCCCCCCCCCE KLSHTTTLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIHGN EECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCC A C >Mature Secondary Structure GMEGIGASVVRKEDKRFITGKGRYVDDIKLVGMTYAHFIRSPHAHAKVKSIDPSAAEAM CCCCCCHHHHHHCCCEEEECCCCEECCEEEHHHHHHHHHCCCCCCCEEECCCCHHHHHC PGVVAVLTGKQIVDDKVGNLICGWAITSKDGSPMKMGAWPAMAPETVRFVGQAVAVVIAD CCEEEEECCCHHHHHHHCCEEEEEEEECCCCCCEEECCCCCCCHHHHHHHHHEEEEEEEC SKNLARDAAEAVVVEYEELPAVADMPSALKPGAPQLHPEAPGNVVYDWHIGDEAAVSAAF CCHHHHHHHHHEEEEHHHCCCHHCCCHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH SKAAHVVSLELTNNRLAPNAMEPRAAIADYDAAEEHFTLYTTSQNPHVARLVLSAFYNIA HHCEEEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCC PEHKLRVIAPDVGGGFGSKIFIYPEEMVALWASKKVGRPVKWTGDRTEAFLTDAHGRDHI CCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCCHH SKAEMAFDADHKMLGLRVKTHANFGAYMSLFSSSVPTYLYATLLSGQYNIPAIYAEVMGV HHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHH YTNTTPVDAYRGAGRPEASYLLERLVETAARQFKVDPAELRRKNFITQFPHQTPVIMAYD CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEE TGDFNASLDAALKAIDYAGFAGRKAAAKAQGKLRGIGFSCYIEACGIAPSKAVGSLGAGV CCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEECCEEEEEEECCCCCHHHHHHCCCCC GLWESAEIRVNPVGTIEVLTGSHSHGQGHETTFCQLIADRLGVPISQVSIVHGDTDKVQF CCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHEEEEECCCCCEEE GMGTYGSRSAAVGLTAILKAMEKVEAKAKKIAAHALEASEGDIVIENGEFKVTGTDKSIA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCHH LPMVALAAYTAHNLPDGMEPGLKESAFYDPTNFTFPAGTYICELEVDQATGKTSFVNFVA HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEE ADDFGRLINPMIVEGQVHGGLVQGIGQALLEHAVYDGNGQPVTASFMDYAMPRADDVPSF CCCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHEECCCCCEEEHHHHHHCCCCCCCCCCE KLSHTTTLCPGNPLGVKGCGEAGAIGASAAVINAITDAIGNNKLEMPATPDRVWHAIHGN EECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]