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The map label for this gene is cydA [H]

Identifier: 146343597

GI number: 146343597

Start: 7095290

End: 7096642

Strand: Direct

Name: cydA [H]

Synonym: BRADO6835

Alternate gene names: 146343597

Gene position: 7095290-7096642 (Clockwise)

Preceding gene: 146343596

Following gene: 146343598

Centisome position: 95.15

GC content: 64.82

Gene sequence:

>1353_bases
GTGATCTTCCACATCATCTTCCCTGCCTTCTCGATCGGGCTTGCCTCCTACCTCGCGGTGCTCGAGGCGCTGTGGCTGTG
GACCGGACGGGACGTCTACCTCAACGTTTTCAACTACTGGCTCAAGATCTTCGCCATCGCATTCGCGATGGGCGTCGTGT
CGGGCATCGTGATGTCCTATCAGTTCGGCACCAACTGGTCGGTCTATTCCGACAAGGTTGGCCCCGTCATCGGCCCGCTG
ATGGCCTATGAGGTGCTGACCGCGTTCTTTCTCGAAGCCGGCTTCCTCGGCGTCATGCTGTTCGGGCTGAAGCGCGTCGG
CCCGAAGCTGCATTTCCTCGCCACCCTGATGGTCGCGGTCGGCACCTTGATCTCGGCATTCTGGATCCTCTCGGCCAATT
CCTGGATGCAGACGCCGGCCGGCTACGCCGTCAATGCCGAGGGCCAGTTCGTCTCGATCGATTGGCTGAAGGTGATCTTC
AATCCGTCGTTCCCCTACCGCCTCGTCCACATGGTTCTGGCGGCCTATCTCACGACCTCGCTGGTGGTCGGCGCAGTCGG
CGCCTGGCATCTCCTGCGCAATCCGCATCTGCCGGGGCCACGCGTGATGTTCTCGATGGCGATGTGGATGGCCGCGCTGG
TCGCGCCGCTGCAGATTTTGGTCGGCGATCAGCATGGTCTCAACACGCTCGAGCACCAGCCGGTGAAGATCATGGCCATG
GAGGGCCATTTCGAGAGCCACAAGGATGGCGCGCCGCTGTATCTGTTCGGCTGGCCCGACCAGGCCAAGGGCGAACTGAA
ATGGGCGCTCGGCATTCCCAAATTCGGCTCGCTGATCCTCAAGCACCAGATCGACGCGCCGATGGCCGGGCTCGACACCG
TACCGCGGCAGGATTGGCCGCCGGTGCCGATCACCTTCTGGTCGTTCCGCATCATGGTCGGGCTGGGCCTGCTGATGCTG
GCGCTCGGCCTGTTCAGCCTGTGGGAGCGCTGGCGCGGCCGGCTGTACATCAATCGAAACCTGCATCGCTTCGCGATCGC
AATGGGCCCCGCAGGCTTCGTCGCCGTGATCGCCGGCTGGGTCACGACCGAGACCGGCCGACAGCCGTACACCGTGTACG
GCCTGCTGCGCACCGCCGATTCGGTCTCGCCGCTGGCGGCGCCGGCGGTCGGGACCTCGCTGCTGGCGTTCATCATCGTG
TACTTCATCATTTTCGCCGCAGGCGCGCTGTACATCCTGCGCCTGATGGCCGAGCCGCCGCACCCTGGTGAGCCCGGCCT
GAGCAGCGCGCAGCCGGTCCGGACCGCCGGCATCACGCCGGCAGCCGGCGTCGTGCAGGGAGCGGGATCATGA

Upstream 100 bases:

>100_bases
TGTCCGCGCGACAGGGGCCCGCGCGCCTCGCAATGACGGACGGTCGAGGATGTTCGGTTTGGATGCGGTGGAGCTGGCGC
GTGCGCAATTCGCCTTCACA

Downstream 100 bases:

>100_bases
GCGTCGCCGTCGATCTCGCCACGCTTTGGGCCTTCATCATCGCGCTCGCTGTGTTCATCTATGTCGTGATGGACGGCTTC
GATCTCGGCCTCGGCATTCT

Product: cytochrome bd ubiquinol oxidase subunit I (cydA, QxtA)

Products: NA

Alternate protein names: Cytochrome d ubiquinol oxidase subunit I [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MIFHIIFPAFSIGLASYLAVLEALWLWTGRDVYLNVFNYWLKIFAIAFAMGVVSGIVMSYQFGTNWSVYSDKVGPVIGPL
MAYEVLTAFFLEAGFLGVMLFGLKRVGPKLHFLATLMVAVGTLISAFWILSANSWMQTPAGYAVNAEGQFVSIDWLKVIF
NPSFPYRLVHMVLAAYLTTSLVVGAVGAWHLLRNPHLPGPRVMFSMAMWMAALVAPLQILVGDQHGLNTLEHQPVKIMAM
EGHFESHKDGAPLYLFGWPDQAKGELKWALGIPKFGSLILKHQIDAPMAGLDTVPRQDWPPVPITFWSFRIMVGLGLLML
ALGLFSLWERWRGRLYINRNLHRFAIAMGPAGFVAVIAGWVTTETGRQPYTVYGLLRTADSVSPLAAPAVGTSLLAFIIV
YFIIFAAGALYILRLMAEPPHPGEPGLSSAQPVRTAGITPAAGVVQGAGS

Sequences:

>Translated_450_residues
MIFHIIFPAFSIGLASYLAVLEALWLWTGRDVYLNVFNYWLKIFAIAFAMGVVSGIVMSYQFGTNWSVYSDKVGPVIGPL
MAYEVLTAFFLEAGFLGVMLFGLKRVGPKLHFLATLMVAVGTLISAFWILSANSWMQTPAGYAVNAEGQFVSIDWLKVIF
NPSFPYRLVHMVLAAYLTTSLVVGAVGAWHLLRNPHLPGPRVMFSMAMWMAALVAPLQILVGDQHGLNTLEHQPVKIMAM
EGHFESHKDGAPLYLFGWPDQAKGELKWALGIPKFGSLILKHQIDAPMAGLDTVPRQDWPPVPITFWSFRIMVGLGLLML
ALGLFSLWERWRGRLYINRNLHRFAIAMGPAGFVAVIAGWVTTETGRQPYTVYGLLRTADSVSPLAAPAVGTSLLAFIIV
YFIIFAAGALYILRLMAEPPHPGEPGLSSAQPVRTAGITPAAGVVQGAGS
>Mature_450_residues
MIFHIIFPAFSIGLASYLAVLEALWLWTGRDVYLNVFNYWLKIFAIAFAMGVVSGIVMSYQFGTNWSVYSDKVGPVIGPL
MAYEVLTAFFLEAGFLGVMLFGLKRVGPKLHFLATLMVAVGTLISAFWILSANSWMQTPAGYAVNAEGQFVSIDWLKVIF
NPSFPYRLVHMVLAAYLTTSLVVGAVGAWHLLRNPHLPGPRVMFSMAMWMAALVAPLQILVGDQHGLNTLEHQPVKIMAM
EGHFESHKDGAPLYLFGWPDQAKGELKWALGIPKFGSLILKHQIDAPMAGLDTVPRQDWPPVPITFWSFRIMVGLGLLML
ALGLFSLWERWRGRLYINRNLHRFAIAMGPAGFVAVIAGWVTTETGRQPYTVYGLLRTADSVSPLAAPAVGTSLLAFIIV
YFIIFAAGALYILRLMAEPPHPGEPGLSSAQPVRTAGITPAAGVVQGAGS

Specific function: Cytochrome Oxidase Subunit. [C]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=502, Percent_Identity=29.8804780876494, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI87081779, Length=508, Percent_Identity=28.740157480315, Blast_Score=202, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.-

Molecular weight: Translated: 49280; Mature: 49280

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFHIIFPAFSIGLASYLAVLEALWLWTGRDVYLNVFNYWLKIFAIAFAMGVVSGIVMSY
CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
QFGTNWSVYSDKVGPVIGPLMAYEVLTAFFLEAGFLGVMLFGLKRVGPKLHFLATLMVAV
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GTLISAFWILSANSWMQTPAGYAVNAEGQFVSIDWLKVIFNPSFPYRLVHMVLAAYLTTS
HHHHHHHHHHCCCCHHCCCCCEEECCCCCEEEEEHEEEEECCCCHHHHHHHHHHHHHHHH
LVVGAVGAWHLLRNPHLPGPRVMFSMAMWMAALVAPLQILVGDQHGLNTLEHQPVKIMAM
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
EGHFESHKDGAPLYLFGWPDQAKGELKWALGIPKFGSLILKHQIDAPMAGLDTVPRQDWP
CCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PVPITFWSFRIMVGLGLLMLALGLFSLWERWRGRLYINRNLHRFAIAMGPAGFVAVIAGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCHHHHHHHHH
VTTETGRQPYTVYGLLRTADSVSPLAAPAVGTSLLAFIIVYFIIFAAGALYILRLMAEPP
HCCCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HPGEPGLSSAQPVRTAGITPAAGVVQGAGS
CCCCCCCCCCCCCHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MIFHIIFPAFSIGLASYLAVLEALWLWTGRDVYLNVFNYWLKIFAIAFAMGVVSGIVMSY
CEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
QFGTNWSVYSDKVGPVIGPLMAYEVLTAFFLEAGFLGVMLFGLKRVGPKLHFLATLMVAV
EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
GTLISAFWILSANSWMQTPAGYAVNAEGQFVSIDWLKVIFNPSFPYRLVHMVLAAYLTTS
HHHHHHHHHHCCCCHHCCCCCEEECCCCCEEEEEHEEEEECCCCHHHHHHHHHHHHHHHH
LVVGAVGAWHLLRNPHLPGPRVMFSMAMWMAALVAPLQILVGDQHGLNTLEHQPVKIMAM
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
EGHFESHKDGAPLYLFGWPDQAKGELKWALGIPKFGSLILKHQIDAPMAGLDTVPRQDWP
CCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
PVPITFWSFRIMVGLGLLMLALGLFSLWERWRGRLYINRNLHRFAIAMGPAGFVAVIAGW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCHHHHHHHHH
VTTETGRQPYTVYGLLRTADSVSPLAAPAVGTSLLAFIIVYFIIFAAGALYILRLMAEPP
HCCCCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HPGEPGLSSAQPVRTAGITPAAGVVQGAGS
CCCCCCCCCCCCCHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]