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The map label for this gene is fdxB [H]

Identifier: 146343571

GI number: 146343571

Start: 7066300

End: 7066623

Strand: Reverse

Name: fdxB [H]

Synonym: BRADO6809

Alternate gene names: 146343571

Gene position: 7066623-7066300 (Counterclockwise)

Preceding gene: 146343572

Following gene: 146343570

Centisome position: 94.77

GC content: 66.67

Gene sequence:

>324_bases
ATGACGACGATCACCTTCATTCATGCCGACAACCGCAGCCAGACCGTGGAGGCGTCGGATGGCGACAGCCTGATGATGGC
GGCGCTGACCCATGGCGTCGACGGCATCGTCGCCGAATGCGGCGGCAACGCCGTCTGCGCCACCTGCCACGTCTATATCG
ACGAAGCCTGGACGGCGAGGCTCGATCCCGTCTCCGATGACGAGGATGCGTTGCTCGACGGCACCGCCGCCGAGCGGCTG
CCGAACAGCCGGCTGTCCTGCCAGATCAAGGTGCAGCCGGCGCTCGCCGGGCTGGTGGTCCGGATCCCTGACAAGCAGAG
CTAG

Upstream 100 bases:

>100_bases
TGAGCGGCGCGCCGAAGCGCCGCTACAACAACACGCTGCGCGGGCTGGAGAGCCTGCCGGTCACCTTCACTCCAGCCTGA
GCCAAGAGTCTGAGCAAGCC

Downstream 100 bases:

>100_bases
TTCATCGACACCTATCAAAATAATAACACAGGGGGAGGACCATCATGAAGCAACTCAGAGCCTGCGCGCTGGCGCTGACC
GCATCGTTCGGCGCGGCGAC

Product: 2Fe-2S ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTTITFIHADNRSQTVEASDGDSLMMAALTHGVDGIVAECGGNAVCATCHVYIDEAWTARLDPVSDDEDALLDGTAAERL
PNSRLSCQIKVQPALAGLVVRIPDKQS

Sequences:

>Translated_107_residues
MTTITFIHADNRSQTVEASDGDSLMMAALTHGVDGIVAECGGNAVCATCHVYIDEAWTARLDPVSDDEDALLDGTAAERL
PNSRLSCQIKVQPALAGLVVRIPDKQS
>Mature_106_residues
TTITFIHADNRSQTVEASDGDSLMMAALTHGVDGIVAECGGNAVCATCHVYIDEAWTARLDPVSDDEDALLDGTAAERLP
NSRLSCQIKVQPALAGLVVRIPDKQS

Specific function: Ferredoxin-type protein which transfers electrons from rhodocoxin reductase to cytochrome CYP116 (ThcB), which is involved in the degradation of thiocarbamate herbicides [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17544202, Length=103, Percent_Identity=32.0388349514563, Blast_Score=62, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6325004, Length=100, Percent_Identity=37, Blast_Score=65, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24661503, Length=103, Percent_Identity=31.0679611650485, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11327; Mature: 11196

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTITFIHADNRSQTVEASDGDSLMMAALTHGVDGIVAECGGNAVCATCHVYIDEAWTAR
CCEEEEEEECCCCCEEECCCCCCEEEEEHHCCCCCEEEECCCCEEEEEEEEEECCCCEEE
LDPVSDDEDALLDGTAAERLPNSRLSCQIKVQPALAGLVVRIPDKQS
CCCCCCCCCCEECCCHHHHCCCCCCEEEEEECCCCEEEEEECCCCCC
>Mature Secondary Structure 
TTITFIHADNRSQTVEASDGDSLMMAALTHGVDGIVAECGGNAVCATCHVYIDEAWTAR
CEEEEEEECCCCCEEECCCCCCEEEEEHHCCCCCEEEECCCCEEEEEEEEEECCCCEEE
LDPVSDDEDALLDGTAAERLPNSRLSCQIKVQPALAGLVVRIPDKQS
CCCCCCCCCCEECCCHHHHCCCCCCEEEEEECCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]