| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is braD [H]
Identifier: 146343567
GI number: 146343567
Start: 7062149
End: 7063075
Strand: Reverse
Name: braD [H]
Synonym: BRADO6805
Alternate gene names: 146343567
Gene position: 7063075-7062149 (Counterclockwise)
Preceding gene: 146343568
Following gene: 146343566
Centisome position: 94.72
GC content: 63.86
Gene sequence:
>927_bases GTGAGGGGCATGCTTCTCGTCGTCGAACAATTCCTGAACGGTCTGCAGTACGGGCTGCTGCTGTTCCTGCTGGCTGCCGG CCTGACGCTGGTGTTCGGCATCATGGACCTCGTCAACCTCGCGCACGGCTCGCTCTACATGATGGGCGCCTATTTCGCGG CGACCTTCGCGGCCTGGACCGGCAGCTTCGTGCTCGGCGGGATCATGGCGCTCGGTGCCACGTTACTGCTCGGCATCGTG CTCGAATTCACGGCATTGCGCCATCTCTACGGGCGCGATCATCTCGACCACGTGCTTGCAACCTTCGGCCTGATCCTGTT CTTCAACGAAGCTGTCCGGCTGATCTGGGGCCCCGCAGGATTGTCCTTGCCGGTGCCGTCCTGGCTGTCCTTTCCGGTCA CAATCCCGCCCGGCATCCAATATCCGGCCTATCGTCTTGCCATCATCGTGGTGGCGTTGTTGGTGGCGCTGCTGCTCTAT CTCGGCGTCATGCGCACCCGCATCGGCATGCTGATCCGCGCCGGCGCCTCCAACCGGGAGATGATCGGCGCGCTCGGCAT CAACATCAAGCTGCTGTACACGCTGGTGTTCGGCCTCGGAGCCGCGCTCGCCGGCCTCGCCGGTCTGATGCAGGCGCCGA TCCTCACGGTGCAGATCGGCATGGGCGAGAACATCCTGATCCTTGCCTTCGTCGTGATCGTGATCGGGGGCATCGGCTCG ATCCGCGGCGCCTTCGTCGCGGCGATCATGATCGGCCTGATCGACACGATGGGGCGCGCATTCCTGCCCAATTTGCTGCG CCAGGTGCTGAATTCGGCCGCAGCGTCCACGGCGGCGCCAGCGATGTCGTCGATGCTGATCTATCTCCTGATGGCGATCG TGCTGGTGGCGCGGCCTGAAGGTCTGTTTCCGGCCAACCGCAGATGA
Upstream 100 bases:
>100_bases CTGGAATTTGCTTGAAGCTTAAAACATCTCCGGCCTAAGATCGGGACGGACATGGCGGCAGCGCCTGCGATGGTTCTGCC GCCGTCTTTTTGAGCGTGAA
Downstream 100 bases:
>100_bases TATCCAAGCTCAACGTCTCAGGCGTCGTCGCCATCATCGTCGTGGCCGGCCTCGTCCTGCTGCCGGTTTACTCGAACCTC ACCGGCAACATCTTCATCCT
Product: putative branched-chain amino acid ABC transporter permease
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MRGMLLVVEQFLNGLQYGLLLFLLAAGLTLVFGIMDLVNLAHGSLYMMGAYFAATFAAWTGSFVLGGIMALGATLLLGIV LEFTALRHLYGRDHLDHVLATFGLILFFNEAVRLIWGPAGLSLPVPSWLSFPVTIPPGIQYPAYRLAIIVVALLVALLLY LGVMRTRIGMLIRAGASNREMIGALGINIKLLYTLVFGLGAALAGLAGLMQAPILTVQIGMGENILILAFVVIVIGGIGS IRGAFVAAIMIGLIDTMGRAFLPNLLRQVLNSAAASTAAPAMSSMLIYLLMAIVLVARPEGLFPANRR
Sequences:
>Translated_308_residues MRGMLLVVEQFLNGLQYGLLLFLLAAGLTLVFGIMDLVNLAHGSLYMMGAYFAATFAAWTGSFVLGGIMALGATLLLGIV LEFTALRHLYGRDHLDHVLATFGLILFFNEAVRLIWGPAGLSLPVPSWLSFPVTIPPGIQYPAYRLAIIVVALLVALLLY LGVMRTRIGMLIRAGASNREMIGALGINIKLLYTLVFGLGAALAGLAGLMQAPILTVQIGMGENILILAFVVIVIGGIGS IRGAFVAAIMIGLIDTMGRAFLPNLLRQVLNSAAASTAAPAMSSMLIYLLMAIVLVARPEGLFPANRR >Mature_308_residues MRGMLLVVEQFLNGLQYGLLLFLLAAGLTLVFGIMDLVNLAHGSLYMMGAYFAATFAAWTGSFVLGGIMALGATLLLGIV LEFTALRHLYGRDHLDHVLATFGLILFFNEAVRLIWGPAGLSLPVPSWLSFPVTIPPGIQYPAYRLAIIVVALLVALLLY LGVMRTRIGMLIRAGASNREMIGALGINIKLLYTLVFGLGAALAGLAGLMQAPILTVQIGMGENILILAFVVIVIGGIGS IRGAFVAAIMIGLIDTMGRAFLPNLLRQVLNSAAASTAAPAMSSMLIYLLMAIVLVARPEGLFPANRR
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=325, Percent_Identity=27.3846153846154, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 32738; Mature: 32738
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGMLLVVEQFLNGLQYGLLLFLLAAGLTLVFGIMDLVNLAHGSLYMMGAYFAATFAAWT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GSFVLGGIMALGATLLLGIVLEFTALRHLYGRDHLDHVLATFGLILFFNEAVRLIWGPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSLPVPSWLSFPVTIPPGIQYPAYRLAIIVVALLVALLLYLGVMRTRIGMLIRAGASNRE CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH MIGALGINIKLLYTLVFGLGAALAGLAGLMQAPILTVQIGMGENILILAFVVIVIGGIGS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHH IRGAFVAAIMIGLIDTMGRAFLPNLLRQVLNSAAASTAAPAMSSMLIYLLMAIVLVARPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLFPANRR CCCCCCCC >Mature Secondary Structure MRGMLLVVEQFLNGLQYGLLLFLLAAGLTLVFGIMDLVNLAHGSLYMMGAYFAATFAAWT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GSFVLGGIMALGATLLLGIVLEFTALRHLYGRDHLDHVLATFGLILFFNEAVRLIWGPAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSLPVPSWLSFPVTIPPGIQYPAYRLAIIVVALLVALLLYLGVMRTRIGMLIRAGASNRE CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH MIGALGINIKLLYTLVFGLGAALAGLAGLMQAPILTVQIGMGENILILAFVVIVIGGIGS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCHH IRGAFVAAIMIGLIDTMGRAFLPNLLRQVLNSAAASTAAPAMSSMLIYLLMAIVLVARPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLFPANRR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]