| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343568
Identifier: 146343568
GI number: 146343568
Start: 7063211
End: 7064383
Strand: Reverse
Name: 146343568
Synonym: BRADO6806
Alternate gene names: NA
Gene position: 7064383-7063211 (Counterclockwise)
Preceding gene: 146343570
Following gene: 146343567
Centisome position: 94.74
GC content: 61.72
Gene sequence:
>1173_bases ATGAAAACGAGCTTCTGGCTGGCAGGCGCCGCGGCACTGCTGTTCTCGAGCACCGCCTTTGCCGGCGACACCATCAAGAT CGGCTTCGTTTCGACCTTCAGCGGCCCGACCGCCGTGATCGGCAACGACATGCGCAACTCGTTCGAGCTCGCACTCGACC ATCTCGGCCGCAAGATGGATGGCAAGCCGGTCGAGGTGATCTACGAGGACGATCAGCAGAAGCCTGACGTCGGCAAGCAG AAGACCGAGAAGCTGGTGCAGTCCGACAAGGTCGATTTCATCGTCGGCTACATCTGGTCGAACGTGCTCTTGGCCTCGCT GAAGACCGCGGTCGATTCCCAGACCTTCCTGATCTCCGCCAATGCCGGCCCGTCGCAGCTCGCCGGCGAATTGTGCTCGC CTTACGTGTTCTCGACCTCCTGGCAGAACGACCAGACGCCCGCGGCGATGGGCCTCTACATGAACCAGAAGGGCGTGAAG TCGGTGTTCCTGATCGGCCCGAACTATGCGGCCGGCAAGGACATGCTGGCGGGCGTGAAGAGCACGTTCAAGGGGCAGGT GGTCGGCGAGGAATATACGGTTTGGCCGAGCCAGCTCGACTTCTCCGCCGAGCTCTCCAAGGCGCGCGCCTCCGGCGCCG AGTCGATCTTCGTGTTCTATCCGGGCGCGGCGGGCGTGCAGTTCCTCAATCAATACGCGCAGGCCGGCCTGAAGGAGAAG ATGCCGCTTTACACCGCCTTCACGGTCGACGAATTGTCGCTGCCGCTGCAAAAGGACAATGCCATCGGCGTGCCCGGCGC CCAGGAATGGGTCAACGACCTGCCCAACGAGCAGAACAAGACCTTCGTCGCCGATTACCGCAAGAAATACACCGGCCTGC GCCCCACTTATTACGGTGCCCAGGCCTATGACGCGGCGCAGCTGATCAACAGCGCCGTCGTCGCGGTCAAGGGCGACACC TCCAAGAAGGCGGAGATGAAGGCCGAAATGGAGAAGGCCAACTTCAAGTCGCTGCGCGGCGCCTTCAAGTTCGGCAACAA CCACATCCCGATCCAGAGCTTCTATCTCCAGGACGTGGTCAAGGATGCCGACGGCCAGCTCTCGCTGAAGACGGTGGCCA CCATCGTCGAGAACGACCAGGACCGCTTCCACGACAAGTGCCAGATGAAATAG
Upstream 100 bases:
>100_bases CGCGACGGGTCGTTGCGGCGAAACGCCGCCGCCGGCCGGTGTCGCTGCGCGCGGGTGACGAAACAACGATAAGAACGACC CAAGAAGGGGAGGGAAGACG
Downstream 100 bases:
>100_bases CGATCGAGAAAATCTCCCGGCCGGCCTCGACCGGCCTGGAATTTGCTTGAAGCTTAAAACATCTCCGGCCTAAGATCGGG ACGGACATGGCGGCAGCGCC
Product: branched chain amino-acid ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MKTSFWLAGAAALLFSSTAFAGDTIKIGFVSTFSGPTAVIGNDMRNSFELALDHLGRKMDGKPVEVIYEDDQQKPDVGKQ KTEKLVQSDKVDFIVGYIWSNVLLASLKTAVDSQTFLISANAGPSQLAGELCSPYVFSTSWQNDQTPAAMGLYMNQKGVK SVFLIGPNYAAGKDMLAGVKSTFKGQVVGEEYTVWPSQLDFSAELSKARASGAESIFVFYPGAAGVQFLNQYAQAGLKEK MPLYTAFTVDELSLPLQKDNAIGVPGAQEWVNDLPNEQNKTFVADYRKKYTGLRPTYYGAQAYDAAQLINSAVVAVKGDT SKKAEMKAEMEKANFKSLRGAFKFGNNHIPIQSFYLQDVVKDADGQLSLKTVATIVENDQDRFHDKCQMK
Sequences:
>Translated_390_residues MKTSFWLAGAAALLFSSTAFAGDTIKIGFVSTFSGPTAVIGNDMRNSFELALDHLGRKMDGKPVEVIYEDDQQKPDVGKQ KTEKLVQSDKVDFIVGYIWSNVLLASLKTAVDSQTFLISANAGPSQLAGELCSPYVFSTSWQNDQTPAAMGLYMNQKGVK SVFLIGPNYAAGKDMLAGVKSTFKGQVVGEEYTVWPSQLDFSAELSKARASGAESIFVFYPGAAGVQFLNQYAQAGLKEK MPLYTAFTVDELSLPLQKDNAIGVPGAQEWVNDLPNEQNKTFVADYRKKYTGLRPTYYGAQAYDAAQLINSAVVAVKGDT SKKAEMKAEMEKANFKSLRGAFKFGNNHIPIQSFYLQDVVKDADGQLSLKTVATIVENDQDRFHDKCQMK >Mature_390_residues MKTSFWLAGAAALLFSSTAFAGDTIKIGFVSTFSGPTAVIGNDMRNSFELALDHLGRKMDGKPVEVIYEDDQQKPDVGKQ KTEKLVQSDKVDFIVGYIWSNVLLASLKTAVDSQTFLISANAGPSQLAGELCSPYVFSTSWQNDQTPAAMGLYMNQKGVK SVFLIGPNYAAGKDMLAGVKSTFKGQVVGEEYTVWPSQLDFSAELSKARASGAESIFVFYPGAAGVQFLNQYAQAGLKEK MPLYTAFTVDELSLPLQKDNAIGVPGAQEWVNDLPNEQNKTFVADYRKKYTGLRPTYYGAQAYDAAQLINSAVVAVKGDT SKKAEMKAEMEKANFKSLRGAFKFGNNHIPIQSFYLQDVVKDADGQLSLKTVATIVENDQDRFHDKCQMK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42655; Mature: 42655
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSFWLAGAAALLFSSTAFAGDTIKIGFVSTFSGPTAVIGNDMRNSFELALDHLGRKMD CCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHCCCCC GKPVEVIYEDDQQKPDVGKQKTEKLVQSDKVDFIVGYIWSNVLLASLKTAVDSQTFLISA CCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC NAGPSQLAGELCSPYVFSTSWQNDQTPAAMGLYMNQKGVKSVFLIGPNYAAGKDMLAGVK CCCHHHHHHHHCCCCEEECCCCCCCCCHHHEEEECCCCCCEEEEECCCCCCCHHHHHHHH STFKGQVVGEEYTVWPSQLDFSAELSKARASGAESIFVFYPGAAGVQFLNQYAQAGLKEK HHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCHHHC MPLYTAFTVDELSLPLQKDNAIGVPGAQEWVNDLPNEQNKTFVADYRKKYTGLRPTYYGA CCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC QAYDAAQLINSAVVAVKGDTSKKAEMKAEMEKANFKSLRGAFKFGNNHIPIQSFYLQDVV HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KDADGQLSLKTVATIVENDQDRFHDKCQMK HCCCCCEEHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure MKTSFWLAGAAALLFSSTAFAGDTIKIGFVSTFSGPTAVIGNDMRNSFELALDHLGRKMD CCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHHHCCCCC GKPVEVIYEDDQQKPDVGKQKTEKLVQSDKVDFIVGYIWSNVLLASLKTAVDSQTFLISA CCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC NAGPSQLAGELCSPYVFSTSWQNDQTPAAMGLYMNQKGVKSVFLIGPNYAAGKDMLAGVK CCCHHHHHHHHCCCCEEECCCCCCCCCHHHEEEECCCCCCEEEEECCCCCCCHHHHHHHH STFKGQVVGEEYTVWPSQLDFSAELSKARASGAESIFVFYPGAAGVQFLNQYAQAGLKEK HHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCHHHC MPLYTAFTVDELSLPLQKDNAIGVPGAQEWVNDLPNEQNKTFVADYRKKYTGLRPTYYGA CCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCC QAYDAAQLINSAVVAVKGDTSKKAEMKAEMEKANFKSLRGAFKFGNNHIPIQSFYLQDVV HHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH KDADGQLSLKTVATIVENDQDRFHDKCQMK HCCCCCEEHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA