| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343523
Identifier: 146343523
GI number: 146343523
Start: 7017309
End: 7018409
Strand: Direct
Name: 146343523
Synonym: BRADO6758
Alternate gene names: NA
Gene position: 7017309-7018409 (Clockwise)
Preceding gene: 146343522
Following gene: 146343524
Centisome position: 94.11
GC content: 66.85
Gene sequence:
>1101_bases ATGTTGCACACATTGCTACGAACCGGCGCCATCGCCGCCGGTCTCGCCTTCGGCCTGTCAGCCGTCCACGCCGATCCGCT CGGCGACGCCAAGGCCTATATCGAGAAATACGCCTCGAAGGTCGACAAATGGGACGGCCCGACCACCGGTCCGAAGATCG CCAAGGGCAAGACCATCGTCGTGCTCGCCTCCGACATGAAGAATGGCGGCGTCCTCGGCGTCACCAAGGGCATCGAGGAG GCCGCCAAGGCCGCCGGCTGGACCGTGCGCACGCTCGACGGCGCCGGCTCGGTGTCCGGCCGCACCGCGGCGTTCGGCCA GGCGATGACCCTGAAGCCGGATGGGCTCGTGATCTGCGGCTTCGACGCGGTCGAGCAGAAGCCGGGCATGGAGGCCGCCA AGGCTGCGAAGATTCCGATGGTGTCGTGGCATGCGGCGCCCGTGATCGGACCGGTCGCGGACGCCGGCGTGTTCGCCAAC GTGACCACCGATCCGATGGCCGTCTCCACCGCCGCCGCCAACTGGGCCTTCGTCGACGCCAACGGCAAGCCCGGCGTGAT CATCTTCACCGACTCGACCTATGAGATCGCGATCGCCAAGGCCAAGAAGATGAAGGAGGTCATCGAAGGCCTCGGCGGCA AGGTGCTCGAATGGGTCGACACCCCGATCGCCGAGACCTCGACGCGCATGCCGCAGCTCACCACCTCGCTGCTGCAGAAG CACGGCGCGGCGTGGACGCATTCGCTGGCGATCAACGACCTCTACTACGACTTCATGACACCGTCGCTCGCCGCGGCCGG CATCAAGGGCACCGGGGCGCCGGTCAACGTCGCCGCCGGCGACGGCTCCGAGAGCGCTTATCAGCGCATCCGCTCCGGCT CCTACCAAGCCGTGACGGTTGCCGAGCCGCTCAACCTGCAGGGCTGGCAGCTGGTCGACGAACTGAACCGCGCCATCGCC GGAGAGAAGTGGTCCGGCTACGTCTCGCCGCTGCACGTGGTGACCAAGGCCAATGTCGAGTTCGACGGCGGCCCGACCAA CACCTTCGATCCCGGCAACGGCTATCGCAACGCCTACAAGAAGATCTGGGGGCTCGAGTAA
Upstream 100 bases:
>100_bases GATGAACGAATTTCGAGAGGACTACGTGGCCGGCGCGGCGCCGGTCGCGACAACAAGTCCGGCTTTCGACCGGACCCGCA TCACACCAGGGAGACTATCC
Downstream 100 bases:
>100_bases CAGCTCTCCAGCAAGGTCATCGTGCAGCGCCGGTCTCGGCGCTGCAGAACGAGTCAGTACAACGAGGCTGCAAACCTGTC CTCCCCTCCGTACGCAAATG
Product: putative sugar ABC transporter substrate-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MLHTLLRTGAIAAGLAFGLSAVHADPLGDAKAYIEKYASKVDKWDGPTTGPKIAKGKTIVVLASDMKNGGVLGVTKGIEE AAKAAGWTVRTLDGAGSVSGRTAAFGQAMTLKPDGLVICGFDAVEQKPGMEAAKAAKIPMVSWHAAPVIGPVADAGVFAN VTTDPMAVSTAAANWAFVDANGKPGVIIFTDSTYEIAIAKAKKMKEVIEGLGGKVLEWVDTPIAETSTRMPQLTTSLLQK HGAAWTHSLAINDLYYDFMTPSLAAAGIKGTGAPVNVAAGDGSESAYQRIRSGSYQAVTVAEPLNLQGWQLVDELNRAIA GEKWSGYVSPLHVVTKANVEFDGGPTNTFDPGNGYRNAYKKIWGLE
Sequences:
>Translated_366_residues MLHTLLRTGAIAAGLAFGLSAVHADPLGDAKAYIEKYASKVDKWDGPTTGPKIAKGKTIVVLASDMKNGGVLGVTKGIEE AAKAAGWTVRTLDGAGSVSGRTAAFGQAMTLKPDGLVICGFDAVEQKPGMEAAKAAKIPMVSWHAAPVIGPVADAGVFAN VTTDPMAVSTAAANWAFVDANGKPGVIIFTDSTYEIAIAKAKKMKEVIEGLGGKVLEWVDTPIAETSTRMPQLTTSLLQK HGAAWTHSLAINDLYYDFMTPSLAAAGIKGTGAPVNVAAGDGSESAYQRIRSGSYQAVTVAEPLNLQGWQLVDELNRAIA GEKWSGYVSPLHVVTKANVEFDGGPTNTFDPGNGYRNAYKKIWGLE >Mature_366_residues MLHTLLRTGAIAAGLAFGLSAVHADPLGDAKAYIEKYASKVDKWDGPTTGPKIAKGKTIVVLASDMKNGGVLGVTKGIEE AAKAAGWTVRTLDGAGSVSGRTAAFGQAMTLKPDGLVICGFDAVEQKPGMEAAKAAKIPMVSWHAAPVIGPVADAGVFAN VTTDPMAVSTAAANWAFVDANGKPGVIIFTDSTYEIAIAKAKKMKEVIEGLGGKVLEWVDTPIAETSTRMPQLTTSLLQK HGAAWTHSLAINDLYYDFMTPSLAAAGIKGTGAPVNVAAGDGSESAYQRIRSGSYQAVTVAEPLNLQGWQLVDELNRAIA GEKWSGYVSPLHVVTKANVEFDGGPTNTFDPGNGYRNAYKKIWGLE
Specific function: Unknown
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38233; Mature: 38233
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHTLLRTGAIAAGLAFGLSAVHADPLGDAKAYIEKYASKVDKWDGPTTGPKIAKGKTIV CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE VLASDMKNGGVLGVTKGIEEAAKAAGWTVRTLDGAGSVSGRTAAFGQAMTLKPDGLVICG EEECCCCCCCEEEEHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCCEEEECCCCEEEEC FDAVEQKPGMEAAKAAKIPMVSWHAAPVIGPVADAGVFANVTTDPMAVSTAAANWAFVDA CHHHCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEC NGKPGVIIFTDSTYEIAIAKAKKMKEVIEGLGGKVLEWVDTPIAETSTRMPQLTTSLLQK CCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCHHHHHHHHHH HGAAWTHSLAINDLYYDFMTPSLAAAGIKGTGAPVNVAAGDGSESAYQRIRSGSYQAVTV CCCCEEEEEEHHHHHHHHHCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEE AEPLNLQGWQLVDELNRAIAGEKWSGYVSPLHVVTKANVEFDGGPTNTFDPGNGYRNAYK ECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCHHHHHH KIWGLE HHCCCC >Mature Secondary Structure MLHTLLRTGAIAAGLAFGLSAVHADPLGDAKAYIEKYASKVDKWDGPTTGPKIAKGKTIV CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE VLASDMKNGGVLGVTKGIEEAAKAAGWTVRTLDGAGSVSGRTAAFGQAMTLKPDGLVICG EEECCCCCCCEEEEHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCCEEEECCCCEEEEC FDAVEQKPGMEAAKAAKIPMVSWHAAPVIGPVADAGVFANVTTDPMAVSTAAANWAFVDA CHHHCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEC NGKPGVIIFTDSTYEIAIAKAKKMKEVIEGLGGKVLEWVDTPIAETSTRMPQLTTSLLQK CCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCHHHHHHHHHH HGAAWTHSLAINDLYYDFMTPSLAAAGIKGTGAPVNVAAGDGSESAYQRIRSGSYQAVTV CCCCEEEEEEHHHHHHHHHCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHCCCCEEEEE AEPLNLQGWQLVDELNRAIAGEKWSGYVSPLHVVTKANVEFDGGPTNTFDPGNGYRNAYK ECCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCHHHHHH KIWGLE HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA