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The map label for this gene is rbsC [H]

Identifier: 146343522

GI number: 146343522

Start: 7016155

End: 7017213

Strand: Direct

Name: rbsC [H]

Synonym: BRADO6757

Alternate gene names: 146343522

Gene position: 7016155-7017213 (Clockwise)

Preceding gene: 146343521

Following gene: 146343523

Centisome position: 94.09

GC content: 66.38

Gene sequence:

>1059_bases
ATGGGAATGAACTCGATCGAGTCGAATGCGCTGGAGCCGACGCGCGCCGATCTCGCCGGCGCCTCGCTGCCGCAGAAGTT
CTCGCGCATGCTGCCGGTCTACGGCCTGCCGATCATCACGGTGGGGCTGATCGTGCTGTTCTCGCTCCTGCTGCCGAACA
CCTTCCCGACGCTGCTGAACCTGCGCTCGATCATTTCCGACAAGTCGATCATCGCGATGCTGTCCCTGGCGGCGATGATC
CCGATGGCCGCCGGCAAGATCGATCTCACCGTCGGCTACGGCATCGTGCTCTGGCACATCCTTGTCATCAGCCTGCAGAC
GTCACTCGGCCTGCCCTGGCCCGCCGCCGTGCTCATCGTGATCGCGCTCGGCGCCATCACCGGACTGCTCAACGGCCTCC
TCGTCGAGGTCGCCCGCATCGACAGCTTCATCGCCACGCTCGGCACCGGCACCGTGCTCTATGCGCTGGCGCTGTGGCAC
ACCGGCGGCCGCCAGGTCGTCGCGATGCTGCCGGAAGGCTTTCTCGCACTCAACGGCCAGATGATTTTCGGCCTGCCGAT
CACCGGCTTCTATGTGCTCGCGCTGGCGCTGGCGATGTGGCTGGTGTTCGAATATCTGCCGCTCGGCCGCTACATCTACG
CGATCGGCGCCAATCCGAAGACGGCCGCGCTGAACGGCATTCCGGTGCAGCGCTTCACCGTCGGCGCCTTCATGACCTCG
GGCGCGCTGACCGCCGTCACTGGCGTGCTGCTGGCCTCGAAGCTGCGCATCGGCCAGGCCAGCGTCGGCCTCGAATATCT
GCTGCCGGCATTGGTCGGCGCCTTCCTCGGCTCCACCACGATCAAGCCTGGCCGCGTCAATGTCTGGGGCACCATCATCG
GCGTCGCCGTGCTCGCGGTCGGCATCGCCGGTATCCAGCAGTTCGGCGGTTCGTTCTGGGTCGAGCCGCTGTTCAACGGC
GTTACTCTGCTCGCGGCGATCGGCATGGCCGGCTACGCCCAGCGCAAGCGCGGCGCAGTCGCCAAGCTGCCGATGGGAGC
GCCTGAGCCGAAAGGATGA

Upstream 100 bases:

>100_bases
ACGCGCTGACGACGGAAGCGCTGATCACTGCCGCCTCGGCCTCCGAGGCCGCGTAAACAAAGTCGGAGCGGGCCGCTCAG
AGCTCGCCGGGAGGAACGGG

Downstream 100 bases:

>100_bases
ACGAATTTCGAGAGGACTACGTGGCCGGCGCGGCGCCGGTCGCGACAACAAGTCCGGCTTTCGACCGGACCCGCATCACA
CCAGGGAGACTATCCATGTT

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MGMNSIESNALEPTRADLAGASLPQKFSRMLPVYGLPIITVGLIVLFSLLLPNTFPTLLNLRSIISDKSIIAMLSLAAMI
PMAAGKIDLTVGYGIVLWHILVISLQTSLGLPWPAAVLIVIALGAITGLLNGLLVEVARIDSFIATLGTGTVLYALALWH
TGGRQVVAMLPEGFLALNGQMIFGLPITGFYVLALALAMWLVFEYLPLGRYIYAIGANPKTAALNGIPVQRFTVGAFMTS
GALTAVTGVLLASKLRIGQASVGLEYLLPALVGAFLGSTTIKPGRVNVWGTIIGVAVLAVGIAGIQQFGGSFWVEPLFNG
VTLLAAIGMAGYAQRKRGAVAKLPMGAPEPKG

Sequences:

>Translated_352_residues
MGMNSIESNALEPTRADLAGASLPQKFSRMLPVYGLPIITVGLIVLFSLLLPNTFPTLLNLRSIISDKSIIAMLSLAAMI
PMAAGKIDLTVGYGIVLWHILVISLQTSLGLPWPAAVLIVIALGAITGLLNGLLVEVARIDSFIATLGTGTVLYALALWH
TGGRQVVAMLPEGFLALNGQMIFGLPITGFYVLALALAMWLVFEYLPLGRYIYAIGANPKTAALNGIPVQRFTVGAFMTS
GALTAVTGVLLASKLRIGQASVGLEYLLPALVGAFLGSTTIKPGRVNVWGTIIGVAVLAVGIAGIQQFGGSFWVEPLFNG
VTLLAAIGMAGYAQRKRGAVAKLPMGAPEPKG
>Mature_351_residues
GMNSIESNALEPTRADLAGASLPQKFSRMLPVYGLPIITVGLIVLFSLLLPNTFPTLLNLRSIISDKSIIAMLSLAAMIP
MAAGKIDLTVGYGIVLWHILVISLQTSLGLPWPAAVLIVIALGAITGLLNGLLVEVARIDSFIATLGTGTVLYALALWHT
GGRQVVAMLPEGFLALNGQMIFGLPITGFYVLALALAMWLVFEYLPLGRYIYAIGANPKTAALNGIPVQRFTVGAFMTSG
ALTAVTGVLLASKLRIGQASVGLEYLLPALVGAFLGSTTIKPGRVNVWGTIIGVAVLAVGIAGIQQFGGSFWVEPLFNGV
TLLAAIGMAGYAQRKRGAVAKLPMGAPEPKG

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788896, Length=323, Percent_Identity=31.2693498452012, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI145693152, Length=328, Percent_Identity=27.1341463414634, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1790524, Length=276, Percent_Identity=25.7246376811594, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1790191, Length=289, Percent_Identity=29.4117647058824, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1787794, Length=260, Percent_Identity=29.6153846153846, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1788471, Length=170, Percent_Identity=30, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082395, Length=286, Percent_Identity=25.8741258741259, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787793, Length=218, Percent_Identity=26.605504587156, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36778; Mature: 36646

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMNSIESNALEPTRADLAGASLPQKFSRMLPVYGLPIITVGLIVLFSLLLPNTFPTLLN
CCCCCCCCCCCCCHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
LRSIISDKSIIAMLSLAAMIPMAAGKIDLTVGYGIVLWHILVISLQTSLGLPWPAAVLIV
HHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IALGAITGLLNGLLVEVARIDSFIATLGTGTVLYALALWHTGGRQVVAMLPEGFLALNGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCEEECCE
MIFGLPITGFYVLALALAMWLVFEYLPLGRYIYAIGANPKTAALNGIPVQRFTVGAFMTS
EEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHC
GALTAVTGVLLASKLRIGQASVGLEYLLPALVGAFLGSTTIKPGRVNVWGTIIGVAVLAV
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
GIAGIQQFGGSFWVEPLFNGVTLLAAIGMAGYAQRKRGAVAKLPMGAPEPKG
HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC
>Mature Secondary Structure 
GMNSIESNALEPTRADLAGASLPQKFSRMLPVYGLPIITVGLIVLFSLLLPNTFPTLLN
CCCCCCCCCCCCHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH
LRSIISDKSIIAMLSLAAMIPMAAGKIDLTVGYGIVLWHILVISLQTSLGLPWPAAVLIV
HHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IALGAITGLLNGLLVEVARIDSFIATLGTGTVLYALALWHTGGRQVVAMLPEGFLALNGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCEEECCE
MIFGLPITGFYVLALALAMWLVFEYLPLGRYIYAIGANPKTAALNGIPVQRFTVGAFMTS
EEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHC
GALTAVTGVLLASKLRIGQASVGLEYLLPALVGAFLGSTTIKPGRVNVWGTIIGVAVLAV
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
GIAGIQQFGGSFWVEPLFNGVTLLAAIGMAGYAQRKRGAVAKLPMGAPEPKG
HHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]