Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343407
Identifier: 146343407
GI number: 146343407
Start: 6888863
End: 6889369
Strand: Reverse
Name: 146343407
Synonym: BRADO6636
Alternate gene names: NA
Gene position: 6889369-6888863 (Counterclockwise)
Preceding gene: 146343408
Following gene: 146343406
Centisome position: 92.39
GC content: 65.09
Gene sequence:
>507_bases ATGACCCAGCACCCGCCAGGCGACGACCGGACCAATCGCATCGTGGCGGTGACGCTCGACGAGGAGTCGATCGGCCGCTC CGGTCCGGACATCGAGCATGAGCGGGCGATCGCGATCTACGACCTCGTCGAGGAGAACCTGTTCGCGCCCGAGGGCGCCG ACGGCGCCGGTCCCTTCACCCTGCATCTCGGCATCACCGCCAACCGGCTGATGTTCGACATCCGCAAGGAGGACGGCACC CCGGTCGTGACGCATCTGTTGTCGCTGTCGCCGTTCCGGCGGATCGTGAAGGACTATTTCATGATCTGCGACAGCTATTA CAACGCGATCCGCACCGCGACGCCCGACAAGATCGAGGCGATCGACATGGGCCGCCGCGGCATCCATGACGAGGGCTCGC GCACCCTGCAGGAGCGGCTCAAGGGCAAGGTACGGGTCGATTTCGAGACCTCGCGCCGGCTGTTCACTTTGATCACGGTG CTGCATTGGAAGGGCGAGGGCCAGTGA
Upstream 100 bases:
>100_bases CGGAGCAGTTGCGCGCGCTGGGGCCAGCGGCGATGACTCTGGGCAAGGCCGAGGGTCTCGACGCCCATTCACGCTCCGTG GGAATACGCCTCAATCTGCC
Downstream 100 bases:
>100_bases CGCCGCGCGCCGCCCAGCCCGCGTCCTGCCGTCCGGCCAAGGGCGCCTAGACGCATGGCCGAGGGGCCGCCGCGCGCGCG CCAGCCGCAGGCGGTGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTQHPPGDDRTNRIVAVTLDEESIGRSGPDIEHERAIAIYDLVEENLFAPEGADGAGPFTLHLGITANRLMFDIRKEDGT PVVTHLLSLSPFRRIVKDYFMICDSYYNAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLKGKVRVDFETSRRLFTLITV LHWKGEGQ
Sequences:
>Translated_168_residues MTQHPPGDDRTNRIVAVTLDEESIGRSGPDIEHERAIAIYDLVEENLFAPEGADGAGPFTLHLGITANRLMFDIRKEDGT PVVTHLLSLSPFRRIVKDYFMICDSYYNAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLKGKVRVDFETSRRLFTLITV LHWKGEGQ >Mature_167_residues TQHPPGDDRTNRIVAVTLDEESIGRSGPDIEHERAIAIYDLVEENLFAPEGADGAGPFTLHLGITANRLMFDIRKEDGTP VVTHLLSLSPFRRIVKDYFMICDSYYNAIRTATPDKIEAIDMGRRGIHDEGSRTLQERLKGKVRVDFETSRRLFTLITVL HWKGEGQ
Specific function: Unknown
COG id: COG5328
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0262 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y6636_BRASO (A4Z264)
Other databases:
- EMBL: CU234118 - RefSeq: YP_001208455.1 - STRING: A4Z264 - GeneID: 5121276 - GenomeReviews: CU234118_GR - KEGG: bra:BRADO6636 - eggNOG: COG5328 - HOGENOM: HBG294171 - OMA: IDMARRG - ProtClustDB: PRK02853 - BioCyc: BSP376:BRADO6636-MONOMER - HAMAP: MF_00678 - InterPro: IPR008321 - PIRSF: PIRSF032146
Pfam domain/function: PF06793 UPF0262
EC number: NA
Molecular weight: Translated: 19008; Mature: 18877
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQHPPGDDRTNRIVAVTLDEESIGRSGPDIEHERAIAIYDLVEENLFAPEGADGAGPFT CCCCCCCCCCCCEEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE LHLGITANRLMFDIRKEDGTPVVTHLLSLSPFRRIVKDYFMICDSYYNAIRTATPDKIEA EEECCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IDMGRRGIHDEGSRTLQERLKGKVRVDFETSRRLFTLITVLHWKGEGQ HHCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TQHPPGDDRTNRIVAVTLDEESIGRSGPDIEHERAIAIYDLVEENLFAPEGADGAGPFT CCCCCCCCCCCEEEEEEECHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE LHLGITANRLMFDIRKEDGTPVVTHLLSLSPFRRIVKDYFMICDSYYNAIRTATPDKIEA EEECCCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH IDMGRRGIHDEGSRTLQERLKGKVRVDFETSRRLFTLITVLHWKGEGQ HHCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA