Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is hisD [H]
Identifier: 146343408
GI number: 146343408
Start: 6889366
End: 6890661
Strand: Reverse
Name: hisD [H]
Synonym: BRADO6637
Alternate gene names: 146343408
Gene position: 6890661-6889366 (Counterclockwise)
Preceding gene: 146343409
Following gene: 146343407
Centisome position: 92.41
GC content: 69.29
Gene sequence:
>1296_bases ATGCCCATTCGCCTGTCCCGCGCCAGCGCCGATTTCGACACCCAGTTTCGGCAGTTTCTCGCCGCCAAGCGCGAGGTCTC CGCCGACGTCGAAGCCGCCGCCCGCGCCATCGTGGATGACGTCGCCAGGCGCGGCGATGCGGCGCTGCTCGAGGCGACGG CCAAGTTCGACCGGCTGGAGCTGAGCGCCGCCACGCTGCGCGTCACGGCGTCCGAAATCGAAGCCGCGGTGAAAGCTTGC GACACGGCGACCGTCGATGCGCTGACATTCGCCCGCGACCGCATCGAGGCCTTTCACCTCAAGCAGCTGCCCCAGGACCA GCGCTTCACCGATGTCGCCGGCGTCGAGCTCGGCTGGCGCTGGAGCGCGATCGAATCGGCCGGGCTCTATGTCCCGGGCG GCACGGCGGCGTATCCGTCCTCGGTGCTGATGAACGCCATTCCCGCCAAGGTCGCAGGCGTCTCTCGCCTCGTCATGGTG GTGCCGGCGCCGGACGGCAAGCTCAATCCACTGGTACTGGCGGCGGCGCATCTTGGCGGCGTTTCCGAGATCTACCGCGT TGGCGGTGCCCAGGCCGTGGCGGCGCTGGCGCATGGCACCGCGACGATCGCCCCGGTCGCCAAGATCGTCGGCCCCGGCA ATGCCTATGTCGCCGCCGCCAAGCGGCTGGTGTTCGGCAAGGTCGGCATCGACATGATCGCAGGCCCCTCCGAGGTGCTG GTGATCGCCGATGACAGCGGCAATGCCGACTGGATCGCGGCCGATCTGCTCGCCCAGGCCGAGCACGATGCCAGCGCGCA GTCGATCCTGATCACCGACAGCCGCCGCCTGGCCGATGACGTCGCCCGCGCCGTCGAGAGCCAGCTCAAGACCCTGCCCC GCGCCGCGATCGCCGGCGCGTCCTGGGCCGATTTCGGCGCCATCATCGAGGTCGACCACCTCGACGAGGCCGTGCCGCTC GCGGACGCCATCGCCGCCGAGCATCTCGAGATCATGACCGCCGATCCCGATGCGTTCGCGGCCAAGGTCCGCAATGCCGG TGCCATCTTCCTCGGCGCGCACACGCCGGAGGCGATCGGCGACTATGTCGGCGGCTCCAATCACGTGCTGCCCACCGCGC GCTCGGCGCGGTTCTCCTCCGGTCTCGGCGTGCTCGACTTCATGAAGCGCACGTCGCTGTTGAAATGCGGTCCGGAGCAG TTGCGCGCGCTGGGGCCAGCGGCGATGACTCTGGGCAAGGCCGAGGGTCTCGACGCCCATTCACGCTCCGTGGGAATACG CCTCAATCTGCCATGA
Upstream 100 bases:
>100_bases GCTGACCGGGTAGGGGCCGGTTCAAAGGGTTGACGGCCCCGCGCTGCCGCGCCATTGAGCAGGGGGTCTGGGGCAGCCAC CCCTTCGGAAAGTGCCAGAG
Downstream 100 bases:
>100_bases CCCAGCACCCGCCAGGCGACGACCGGACCAATCGCATCGTGGCGGTGACGCTCGACGAGGAGTCGATCGGCCGCTCCGGT CCGGACATCGAGCATGAGCG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MPIRLSRASADFDTQFRQFLAAKREVSADVEAAARAIVDDVARRGDAALLEATAKFDRLELSAATLRVTASEIEAAVKAC DTATVDALTFARDRIEAFHLKQLPQDQRFTDVAGVELGWRWSAIESAGLYVPGGTAAYPSSVLMNAIPAKVAGVSRLVMV VPAPDGKLNPLVLAAAHLGGVSEIYRVGGAQAVAALAHGTATIAPVAKIVGPGNAYVAAAKRLVFGKVGIDMIAGPSEVL VIADDSGNADWIAADLLAQAEHDASAQSILITDSRRLADDVARAVESQLKTLPRAAIAGASWADFGAIIEVDHLDEAVPL ADAIAAEHLEIMTADPDAFAAKVRNAGAIFLGAHTPEAIGDYVGGSNHVLPTARSARFSSGLGVLDFMKRTSLLKCGPEQ LRALGPAAMTLGKAEGLDAHSRSVGIRLNLP
Sequences:
>Translated_431_residues MPIRLSRASADFDTQFRQFLAAKREVSADVEAAARAIVDDVARRGDAALLEATAKFDRLELSAATLRVTASEIEAAVKAC DTATVDALTFARDRIEAFHLKQLPQDQRFTDVAGVELGWRWSAIESAGLYVPGGTAAYPSSVLMNAIPAKVAGVSRLVMV VPAPDGKLNPLVLAAAHLGGVSEIYRVGGAQAVAALAHGTATIAPVAKIVGPGNAYVAAAKRLVFGKVGIDMIAGPSEVL VIADDSGNADWIAADLLAQAEHDASAQSILITDSRRLADDVARAVESQLKTLPRAAIAGASWADFGAIIEVDHLDEAVPL ADAIAAEHLEIMTADPDAFAAKVRNAGAIFLGAHTPEAIGDYVGGSNHVLPTARSARFSSGLGVLDFMKRTSLLKCGPEQ LRALGPAAMTLGKAEGLDAHSRSVGIRLNLP >Mature_430_residues PIRLSRASADFDTQFRQFLAAKREVSADVEAAARAIVDDVARRGDAALLEATAKFDRLELSAATLRVTASEIEAAVKACD TATVDALTFARDRIEAFHLKQLPQDQRFTDVAGVELGWRWSAIESAGLYVPGGTAAYPSSVLMNAIPAKVAGVSRLVMVV PAPDGKLNPLVLAAAHLGGVSEIYRVGGAQAVAALAHGTATIAPVAKIVGPGNAYVAAAKRLVFGKVGIDMIAGPSEVLV IADDSGNADWIAADLLAQAEHDASAQSILITDSRRLADDVARAVESQLKTLPRAAIAGASWADFGAIIEVDHLDEAVPLA DAIAAEHLEIMTADPDAFAAKVRNAGAIFLGAHTPEAIGDYVGGSNHVLPTARSARFSSGLGVLDFMKRTSLLKCGPEQL RALGPAAMTLGKAEGLDAHSRSVGIRLNLP
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=397, Percent_Identity=42.8211586901763, Blast_Score=270, Evalue=9e-74, Organism=Saccharomyces cerevisiae, GI6319819, Length=437, Percent_Identity=38.4439359267735, Blast_Score=270, Evalue=3e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 44855; Mature: 44723
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIRLSRASADFDTQFRQFLAAKREVSADVEAAARAIVDDVARRGDAALLEATAKFDRLE CCEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEE LSAATLRVTASEIEAAVKACDTATVDALTFARDRIEAFHLKQLPQDQRFTDVAGVELGWR EEHHEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEECCE WSAIESAGLYVPGGTAAYPSSVLMNAIPAKVAGVSRLVMVVPAPDGKLNPLVLAAAHLGG EHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHEEEEHHHCC VSEIYRVGGAQAVAALAHGTATIAPVAKIVGPGNAYVAAAKRLVFGKVGIDMIAGPSEVL HHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCCEEE VIADDSGNADWIAADLLAQAEHDASAQSILITDSRRLADDVARAVESQLKTLPRAAIAGA EEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHCCC SWADFGAIIEVDHLDEAVPLADAIAAEHLEIMTADPDAFAAKVRNAGAIFLGAHTPEAIG CCCCCCCEEEECCCCCCCCHHHHHHHHHEEEEECCCHHHHHHHCCCCEEEEECCCHHHHH DYVGGSNHVLPTARSARFSSGLGVLDFMKRTSLLKCGPEQLRALGPAAMTLGKAEGLDAH HHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHCCCCCCCCC SRSVGIRLNLP CCCEEEEEECC >Mature Secondary Structure PIRLSRASADFDTQFRQFLAAKREVSADVEAAARAIVDDVARRGDAALLEATAKFDRLE CEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEE LSAATLRVTASEIEAAVKACDTATVDALTFARDRIEAFHLKQLPQDQRFTDVAGVELGWR EEHHEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCEECCE WSAIESAGLYVPGGTAAYPSSVLMNAIPAKVAGVSRLVMVVPAPDGKLNPLVLAAAHLGG EHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHEEEEHHHCC VSEIYRVGGAQAVAALAHGTATIAPVAKIVGPGNAYVAAAKRLVFGKVGIDMIAGPSEVL HHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCCEEE VIADDSGNADWIAADLLAQAEHDASAQSILITDSRRLADDVARAVESQLKTLPRAAIAGA EEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCHHHHCCC SWADFGAIIEVDHLDEAVPLADAIAAEHLEIMTADPDAFAAKVRNAGAIFLGAHTPEAIG CCCCCCCEEEECCCCCCCCHHHHHHHHHEEEEECCCHHHHHHHCCCCEEEEECCCHHHHH DYVGGSNHVLPTARSARFSSGLGVLDFMKRTSLLKCGPEQLRALGPAAMTLGKAEGLDAH HHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHCCCCCCCCC SRSVGIRLNLP CCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]