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The map label for this gene is ycjO [C]

Identifier: 146343390

GI number: 146343390

Start: 6870272

End: 6871144

Strand: Reverse

Name: ycjO [C]

Synonym: BRADO6619

Alternate gene names: 146343390

Gene position: 6871144-6870272 (Counterclockwise)

Preceding gene: 146343391

Following gene: 146343389

Centisome position: 92.15

GC content: 63.34

Gene sequence:

>873_bases
ATGGCCACCCGACAAACTCAACTGCTCGCCCGGGCGCTGATGTCGCCGGCCGTCATGCTGCTGTTCGTGTGGATGATCGT
GCCGCTGGCGCTGACAATCTACTTCTCGACGCTGCATTACAGCCTGCTCGATCCAGGCTCCGAGAGCTTCGTCGGCCTGG
AGAATTTCGAGTACTTCCTCACCGATCCCGCCTTCCTGGCCTCGCTGCAGAACACTCTGGTCCTCGTTGGCTCCGTTCTG
CTGCTCACCATCGGGCTCGGTATTCCCCTCGCCATATTGCTCGACCAGCCCGTCATCGGTCGCAACTTCATCCGGCTCAT
GGTGATCGCGCCGTTCTTCGTGATGCCGACGGTGAGCGCGCTGGTGTGGAAGAACCTCTTGATGCATCCGGTGTCCGGCC
TGTTCGCGTGGATCGCGACCTCGCTGGGCTTCACCCCGATCGACTGGTTCACCGATGCGCCGCTGCTCGCGGTGATCTTC
ATCGTCGCCTGGCAATGGCTGCCGTTCGCAACGCTCATTCTGCTCACCGCGCTGCAGTCGCTCGACGAGGAGCAGAAGGA
GGCCGCCGAGATGGATGGCGCCAGCGCGCTGTCGCGCTTCATCTACCTGACCTTGCCGCATCTGGCGCGGCCGATCACAG
TGGTGATCCTGATCGAGACGATCTTCCTGCTCACCGTGTTCGCCGAGATCTTCGTCACCACCGGCGGCGGGCCCGGCTTG
CAGACCACCAACATCGCCTTCCTGGTCTATTCGCAGGCGCTGATCCAGTTCGACGTCGGCACCGCCTCGGCCGGCGGCCT
GGTCGCGGTGGTCATCGCCAACATCGTCGCCTTCTTCCTGGTCCGCATCGTCGGCCGCAATCTGGAGGCCTGA

Upstream 100 bases:

>100_bases
AGCGAAGCGACGAAGCAATCCAGAGTCCCGCGCACGCCCCTGGATTGCTTCGCTTCGCTCGCAATGACGGCGGTGTTCAC
CGAGCAATACGGACAGAGCC

Downstream 100 bases:

>100_bases
CATGGCGCGCAAGGTCACCGGACGTCACGTCGTGATCTCAACGCTTGGCGCCTGGCTCGCCGGCTTCGTGATCTTCTTCC
CGATCCTGTGGATGGTGCTG

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MATRQTQLLARALMSPAVMLLFVWMIVPLALTIYFSTLHYSLLDPGSESFVGLENFEYFLTDPAFLASLQNTLVLVGSVL
LLTIGLGIPLAILLDQPVIGRNFIRLMVIAPFFVMPTVSALVWKNLLMHPVSGLFAWIATSLGFTPIDWFTDAPLLAVIF
IVAWQWLPFATLILLTALQSLDEEQKEAAEMDGASALSRFIYLTLPHLARPITVVILIETIFLLTVFAEIFVTTGGGPGL
QTTNIAFLVYSQALIQFDVGTASAGGLVAVVIANIVAFFLVRIVGRNLEA

Sequences:

>Translated_290_residues
MATRQTQLLARALMSPAVMLLFVWMIVPLALTIYFSTLHYSLLDPGSESFVGLENFEYFLTDPAFLASLQNTLVLVGSVL
LLTIGLGIPLAILLDQPVIGRNFIRLMVIAPFFVMPTVSALVWKNLLMHPVSGLFAWIATSLGFTPIDWFTDAPLLAVIF
IVAWQWLPFATLILLTALQSLDEEQKEAAEMDGASALSRFIYLTLPHLARPITVVILIETIFLLTVFAEIFVTTGGGPGL
QTTNIAFLVYSQALIQFDVGTASAGGLVAVVIANIVAFFLVRIVGRNLEA
>Mature_289_residues
ATRQTQLLARALMSPAVMLLFVWMIVPLALTIYFSTLHYSLLDPGSESFVGLENFEYFLTDPAFLASLQNTLVLVGSVLL
LTIGLGIPLAILLDQPVIGRNFIRLMVIAPFFVMPTVSALVWKNLLMHPVSGLFAWIATSLGFTPIDWFTDAPLLAVIFI
VAWQWLPFATLILLTALQSLDEEQKEAAEMDGASALSRFIYLTLPHLARPITVVILIETIFLLTVFAEIFVTTGGGPGLQ
TTNIAFLVYSQALIQFDVGTASAGGLVAVVIANIVAFFLVRIVGRNLEA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=242, Percent_Identity=29.7520661157025, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1789861, Length=285, Percent_Identity=25.9649122807018, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790465, Length=241, Percent_Identity=29.045643153527, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31659; Mature: 31528

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATRQTQLLARALMSPAVMLLFVWMIVPLALTIYFSTLHYSLLDPGSESFVGLENFEYFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
TDPAFLASLQNTLVLVGSVLLLTIGLGIPLAILLDQPVIGRNFIRLMVIAPFFVMPTVSA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LVWKNLLMHPVSGLFAWIATSLGFTPIDWFTDAPLLAVIFIVAWQWLPFATLILLTALQS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDEEQKEAAEMDGASALSRFIYLTLPHLARPITVVILIETIFLLTVFAEIFVTTGGGPGL
HCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
QTTNIAFLVYSQALIQFDVGTASAGGLVAVVIANIVAFFLVRIVGRNLEA
CHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]