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The map label for this gene is nudL [H]

Identifier: 146343374

GI number: 146343374

Start: 6851888

End: 6852517

Strand: Reverse

Name: nudL [H]

Synonym: BRADO6602

Alternate gene names: 146343374

Gene position: 6852517-6851888 (Counterclockwise)

Preceding gene: 146343378

Following gene: 146343373

Centisome position: 91.9

GC content: 70.16

Gene sequence:

>630_bases
ATGGCCATGCCGTTCGACGATGCCACACGACGGAAAATCGCGTCCTGCTGCGCGGGCTTCGTGCGCCTGGACACGATGGC
CGGGACGCCGCCGCTGAAGCGCGCGGCGGTGGCGATCGCGCTGGCCCCGCATCACGAGACCGGCACGACCACGTTGCTGC
TCACCTTGCGCGCCGCGGGACTGCGCAGCCATGGCGGCCAATGGGCGCTGCCGGGCGGCCGCTGTGATGCCGGCGAGACG
CCGATCGAGGGCGCGCTGCGCGAGCTCGAGGAGGAGCTCGGCCTCACCCTCGAGGCGGATGCCGTGCTCGGCCTGCTCGA
TGACTATCCGACGCGGTCGGGCTATCTGATCACCCCTGTCGTCGTGTGGGCGGCGAATGGCCGCATGTTGCGGCCGAATC
CCGACGAGGTCGCCTCGGTGCATCGGATCGGGCTCGATGCGATCACGGCCGACGGCGCGTTCGATTTCACGGCGATCCCC
GAGAGTACGCGGCGCGTGATCCGGTTTCACGCCCGCGAGGGCCTCATTCACGCGCCGACCGCGGCCCTGGTCTATCAGTT
CCGCGAGGTGCTGGCCGGCCGCGATACCCGCGTCCACGAGCTCGAACAGCCGGTGTTCGCCTGGAAGTAG

Upstream 100 bases:

>100_bases
GCCGCAGCTGATTTCGTCATCTCGGACATCCCCTTCCATCGGTGCCGCAGGCCGGCACATGGTCGTTTCATCCGCCGCGG
GGCTGGTGTAGTCAAGCTGC

Downstream 100 bases:

>100_bases
CCACCGTTTCGGCTACAAGGGCGGCATGCCGCATCAGCCGATTCGCAAGCTCGCATTGATCCTCGCCTGCGCCGTCGCGG
GTGCATCGCCTCTCCCGGCC

Product: putative NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MAMPFDDATRRKIASCCAGFVRLDTMAGTPPLKRAAVAIALAPHHETGTTTLLLTLRAAGLRSHGGQWALPGGRCDAGET
PIEGALRELEEELGLTLEADAVLGLLDDYPTRSGYLITPVVVWAANGRMLRPNPDEVASVHRIGLDAITADGAFDFTAIP
ESTRRVIRFHAREGLIHAPTAALVYQFREVLAGRDTRVHELEQPVFAWK

Sequences:

>Translated_209_residues
MAMPFDDATRRKIASCCAGFVRLDTMAGTPPLKRAAVAIALAPHHETGTTTLLLTLRAAGLRSHGGQWALPGGRCDAGET
PIEGALRELEEELGLTLEADAVLGLLDDYPTRSGYLITPVVVWAANGRMLRPNPDEVASVHRIGLDAITADGAFDFTAIP
ESTRRVIRFHAREGLIHAPTAALVYQFREVLAGRDTRVHELEQPVFAWK
>Mature_208_residues
AMPFDDATRRKIASCCAGFVRLDTMAGTPPLKRAAVAIALAPHHETGTTTLLLTLRAAGLRSHGGQWALPGGRCDAGETP
IEGALRELEEELGLTLEADAVLGLLDDYPTRSGYLITPVVVWAANGRMLRPNPDEVASVHRIGLDAITADGAFDFTAIPE
STRRVIRFHAREGLIHAPTAALVYQFREVLAGRDTRVHELEQPVFAWK

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17536993, Length=105, Percent_Identity=40, Blast_Score=70, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22643; Mature: 22512

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMPFDDATRRKIASCCAGFVRLDTMAGTPPLKRAAVAIALAPHHETGTTTLLLTLRAAG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCCCCEEEEEEHHHHH
LRSHGGQWALPGGRCDAGETPIEGALRELEEELGLTLEADAVLGLLDDYPTRSGYLITPV
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEEE
VVWAANGRMLRPNPDEVASVHRIGLDAITADGAFDFTAIPESTRRVIRFHAREGLIHAPT
EEEECCCEEECCCHHHHHHHHHHCCCEEECCCCCCEEECCHHHHHHHHHHHHCCCEECCH
AALVYQFREVLAGRDTRVHELEQPVFAWK
HHHHHHHHHHHCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
AMPFDDATRRKIASCCAGFVRLDTMAGTPPLKRAAVAIALAPHHETGTTTLLLTLRAAG
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEEECCCCCCCCEEEEEEHHHHH
LRSHGGQWALPGGRCDAGETPIEGALRELEEELGLTLEADAVLGLLDDYPTRSGYLITPV
HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEEE
VVWAANGRMLRPNPDEVASVHRIGLDAITADGAFDFTAIPESTRRVIRFHAREGLIHAPT
EEEECCCEEECCCHHHHHHHHHHCCCEEECCCCCCEEECCHHHHHHHHHHHHCCCEECCH
AALVYQFREVLAGRDTRVHELEQPVFAWK
HHHHHHHHHHHCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA