| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343349
Identifier: 146343349
GI number: 146343349
Start: 6825652
End: 6826620
Strand: Reverse
Name: 146343349
Synonym: BRADO6576
Alternate gene names: NA
Gene position: 6826620-6825652 (Counterclockwise)
Preceding gene: 146343350
Following gene: 146343344
Centisome position: 91.55
GC content: 66.56
Gene sequence:
>969_bases ATGTCCATGCCCGCCTTGTTCAAGGGGCGTCTGTCGATCCCGGTGATCGGCTCGCCGCTGTTCATCATCTCCGTGCCCGA TCTCGTCATCGCGCAATGCAAGGCCGGCATCGTGGGCTCGTTTCCGGCGCTCAACGCGCGGCCAGCCGCGCTGCTGGACG AATGGCTGGCGCGCATTACCGAGGAGCTTGCGGCCTATGACCGCGCGCATCCGGAGCGTCCGTCTGCGCCGTTCGCGGTC AACCAGATCGTGCATCGCTCCAACAACCGCCTCGAGCAGGACCTGGCGCTGTGCGAGAAGCACAAGGTGCCGATGATGAT CACCTCGCTCGGCGCGCGCGAGGAGCTGAACCAGGCGGCGCATCGCTGGGGCGGCATCGTTTTCCACGACGTCATCAACC AGTTCTTCGCCCACAAGGCGATCGAGAAGGGCGCCGACGGCCTGATCCTGGTCGCGGCCGGCGCCGGCGGCCATGCCGGC ACGATCTCGCCATTCGCCTTCGTGTCGGAGACGCGCAGCTGGTTCGACGGCCCGATCGCGCTGTCGGGCGCGATCGCCAA TGGCCGCGCCATCCGCGCCGCGCGCGTGCTCGGCGCCGATTTCGCCTATATCGGCTCGGCCTTCATCGCCACCAAGGAGG CGAATGCCGTTGAGGCCTACAAGGACATGATCACCAAGTCGGGCGCCGACGACATCGTCTACTCGAACCTGTTCACCGGC GTGCACGGCAACTACCTGAAGCCGTCGATCGTCAACGCCGGACTCGACCCCGACAATCTGCCGACGTCGGACCCGTCGAA GATGAGCTTCGGCACCGACGCCTCGGGCGAGCGCGCCAAGCCGAAGGCGTGGAAGGAGATCTGGGGCTCCGGCCAGGGCA TCGGCGCCATCAAGGAGGTCGTGCCCGCCGCCGAGCTGATCGCGCGCTTCAAGAAGGAATACGACGAGGCAATCGATCCG CCGCTGTGA
Upstream 100 bases:
>100_bases TTTCCGGTCCCTCTGCGAGCGAATTGCCATGACGGCATGATGTCGGGCATGCTTGCGCGCAACGAGCATCACCGCATTTC ACCAAGAGGAATTCCCATCC
Downstream 100 bases:
>100_bases GGGGGAGTCGCCGCCTCGATTTCCGGTGTCATTCCGGGGCGATGCGCGCCAGCGCGGCGAGCCCGGAATCCATCGGGCCG CGTAGTCCGCCGTGACGTGG
Product: putative dioxygenases related to 2-nitropropane dioxygenase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family; Oxidoreductase; Dioxygenase; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Npd; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; Enoyl-(Acyl-Carrier-Protein) Reductase II; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; 2-Nitropropane Dioxygenase Protein; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MSMPALFKGRLSIPVIGSPLFIISVPDLVIAQCKAGIVGSFPALNARPAALLDEWLARITEELAAYDRAHPERPSAPFAV NQIVHRSNNRLEQDLALCEKHKVPMMITSLGAREELNQAAHRWGGIVFHDVINQFFAHKAIEKGADGLILVAAGAGGHAG TISPFAFVSETRSWFDGPIALSGAIANGRAIRAARVLGADFAYIGSAFIATKEANAVEAYKDMITKSGADDIVYSNLFTG VHGNYLKPSIVNAGLDPDNLPTSDPSKMSFGTDASGERAKPKAWKEIWGSGQGIGAIKEVVPAAELIARFKKEYDEAIDP PL
Sequences:
>Translated_322_residues MSMPALFKGRLSIPVIGSPLFIISVPDLVIAQCKAGIVGSFPALNARPAALLDEWLARITEELAAYDRAHPERPSAPFAV NQIVHRSNNRLEQDLALCEKHKVPMMITSLGAREELNQAAHRWGGIVFHDVINQFFAHKAIEKGADGLILVAAGAGGHAG TISPFAFVSETRSWFDGPIALSGAIANGRAIRAARVLGADFAYIGSAFIATKEANAVEAYKDMITKSGADDIVYSNLFTG VHGNYLKPSIVNAGLDPDNLPTSDPSKMSFGTDASGERAKPKAWKEIWGSGQGIGAIKEVVPAAELIARFKKEYDEAIDP PL >Mature_321_residues SMPALFKGRLSIPVIGSPLFIISVPDLVIAQCKAGIVGSFPALNARPAALLDEWLARITEELAAYDRAHPERPSAPFAVN QIVHRSNNRLEQDLALCEKHKVPMMITSLGAREELNQAAHRWGGIVFHDVINQFFAHKAIEKGADGLILVAAGAGGHAGT ISPFAFVSETRSWFDGPIALSGAIANGRAIRAARVLGADFAYIGSAFIATKEANAVEAYKDMITKSGADDIVYSNLFTGV HGNYLKPSIVNAGLDPDNLPTSDPSKMSFGTDASGERAKPKAWKEIWGSGQGIGAIKEVVPAAELIARFKKEYDEAIDPP L
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34413; Mature: 34281
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPALFKGRLSIPVIGSPLFIISVPDLVIAQCKAGIVGSFPALNARPAALLDEWLARIT CCCCCCCCCCCCCEEECCCEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH EELAAYDRAHPERPSAPFAVNQIVHRSNNRLEQDLALCEKHKVPMMITSLGAREELNQAA HHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHH HRWGGIVFHDVINQFFAHKAIEKGADGLILVAAGAGGHAGTISPFAFVSETRSWFDGPIA HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE LSGAIANGRAIRAARVLGADFAYIGSAFIATKEANAVEAYKDMITKSGADDIVYSNLFTG EECCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHC VHGNYLKPSIVNAGLDPDNLPTSDPSKMSFGTDASGERAKPKAWKEIWGSGQGIGAIKEV CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHH VPAAELIARFKKEYDEAIDPPL HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SMPALFKGRLSIPVIGSPLFIISVPDLVIAQCKAGIVGSFPALNARPAALLDEWLARIT CCCCCCCCCCCCEEECCCEEEEECHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH EELAAYDRAHPERPSAPFAVNQIVHRSNNRLEQDLALCEKHKVPMMITSLGAREELNQAA HHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHH HRWGGIVFHDVINQFFAHKAIEKGADGLILVAAGAGGHAGTISPFAFVSETRSWFDGPIA HHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEE LSGAIANGRAIRAARVLGADFAYIGSAFIATKEANAVEAYKDMITKSGADDIVYSNLFTG EECCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHC VHGNYLKPSIVNAGLDPDNLPTSDPSKMSFGTDASGERAKPKAWKEIWGSGQGIGAIKEV CCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHH VPAAELIARFKKEYDEAIDPPL HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA