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The map label for this gene is ybfB [H]

Identifier: 146343327

GI number: 146343327

Start: 6801607

End: 6802833

Strand: Reverse

Name: ybfB [H]

Synonym: BRADO6553

Alternate gene names: 146343327

Gene position: 6802833-6801607 (Counterclockwise)

Preceding gene: 146343328

Following gene: 146343326

Centisome position: 91.23

GC content: 69.6

Gene sequence:

>1227_bases
ATGAGCACATCGTTGTATCGCTGGGTGATCGTGGGCGCCGGGGGCGTGCTCGGCTGCGTCGCCGTCGGCGGGCTGTTCTC
GCTGCCGGTGTTCCTCAAGCCGATGGCCGCCGCGACCGGCTGGTCGGTCGCAGGCATCTCCAGCGCGCTGACGATCGGCT
TCCTCGCGATGGCCTGCACCAGCATGGCCTGGGGCACGCTGTCCGATCGCATCGGCCCGCGCCCCGTGCTGCTGATCGGC
TCGACCCTGCTCGCGTTGAGTCTTCTGTTGGCAAGCCTGACATCGTCGTTGCTCATGTTCCAGCTGCTGTTCGGCCTGAT
CGCGGGCGTCGCGACGGCGGCGATCTTCCCGCCGGTCATGGCGACCGTCACCGGCTGGTTCGACACCCATCGCAGCCTCG
CGGTCTCGCTGGTGTCGGCCGGCATGGGTGTCGCGCCGATGACGATGTCGCCGCTCGCGGCCTGGCTCGTCTCGAGCTAT
GACTGGCGCACCGCGATGCAGTGCATCGCCGCCGTTGTCGCTGCCATCATGATCCCCACCTCGCTGCTCGTCGGCCGCCC
GCCACTGTCGGCGCCCGGCGACGTCGTCGCGTCGGGCGCCGACGCCGGGCCGGCTGAGATGACGCGCTCGGCGGCGCTGC
GCTCGCCGCAGTTCCTGATCCTGCTCGCCACCAATTTCTTCTGCTGCGCCACCCATTCCGGCCCGATCATCCACACCGTC
AGCTACGCCGTCACCTGCGGCATCCCGCTGATGGCAGCGGTGACGATCTACAGCGTCGAGGGCCTCGCCGGCCTCGGCGG
CCGCATCGCCTTCGGCCTGCTCGGCGACCGCTTCGGCGCCAAGCGCGTGCTCGTGCTCGGCCTCCTCGCGCAAGCCTTCG
GCGCGCTCGCTTATGTGGCCGTGCGCGACCTCGCCGCGTTCTACGCCGTCGCCGCGACGTTCGGCTTCCTCTATGCCGGC
ACCATGCCGCTCTACGCGTCCATCGCGCGCGACAACTTTCCGCAAGGCATCATGGGCACGGTGATCGGCGGCACTGCCAT
GGCCGGCAGCCTGGGGATGGCGACAGGCCCGCTGGCCGGCGGCCTGATCTACGACAGCTTCGCCAGCTACACGTGGCTGT
ATGTCGGCTCATGGATCATGGGCCTCGGCGCGGTCCTGATGATGATGACCTTCCGGCCGTTCCCGAAAGCCCAGTCCGCG
ATGGCGCCGGCGCAAGCCCCGGCGTAG

Upstream 100 bases:

>100_bases
GAGCGGGTTCCGCTCGTGCTTCGCGAAAAACCCTCTGGCGCCTGTCGTCCCGGTGATCGCTCGCTCGTCTTCCAGATGTC
ATCTGCAGGAGATGCTGGAC

Downstream 100 bases:

>100_bases
ATCCGCTGCGGAGCAACATTTGCGGTGTCGCTGCTGATAGGACTTCGTTCCTCATCAGCAGGGTCTGAAGCCTACACCAA
CGCTTGATCGGTGATCCGGA

Product: major facilitator superfamily permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSTSLYRWVIVGAGGVLGCVAVGGLFSLPVFLKPMAAATGWSVAGISSALTIGFLAMACTSMAWGTLSDRIGPRPVLLIG
STLLALSLLLASLTSSLLMFQLLFGLIAGVATAAIFPPVMATVTGWFDTHRSLAVSLVSAGMGVAPMTMSPLAAWLVSSY
DWRTAMQCIAAVVAAIMIPTSLLVGRPPLSAPGDVVASGADAGPAEMTRSAALRSPQFLILLATNFFCCATHSGPIIHTV
SYAVTCGIPLMAAVTIYSVEGLAGLGGRIAFGLLGDRFGAKRVLVLGLLAQAFGALAYVAVRDLAAFYAVAATFGFLYAG
TMPLYASIARDNFPQGIMGTVIGGTAMAGSLGMATGPLAGGLIYDSFASYTWLYVGSWIMGLGAVLMMMTFRPFPKAQSA
MAPAQAPA

Sequences:

>Translated_408_residues
MSTSLYRWVIVGAGGVLGCVAVGGLFSLPVFLKPMAAATGWSVAGISSALTIGFLAMACTSMAWGTLSDRIGPRPVLLIG
STLLALSLLLASLTSSLLMFQLLFGLIAGVATAAIFPPVMATVTGWFDTHRSLAVSLVSAGMGVAPMTMSPLAAWLVSSY
DWRTAMQCIAAVVAAIMIPTSLLVGRPPLSAPGDVVASGADAGPAEMTRSAALRSPQFLILLATNFFCCATHSGPIIHTV
SYAVTCGIPLMAAVTIYSVEGLAGLGGRIAFGLLGDRFGAKRVLVLGLLAQAFGALAYVAVRDLAAFYAVAATFGFLYAG
TMPLYASIARDNFPQGIMGTVIGGTAMAGSLGMATGPLAGGLIYDSFASYTWLYVGSWIMGLGAVLMMMTFRPFPKAQSA
MAPAQAPA
>Mature_407_residues
STSLYRWVIVGAGGVLGCVAVGGLFSLPVFLKPMAAATGWSVAGISSALTIGFLAMACTSMAWGTLSDRIGPRPVLLIGS
TLLALSLLLASLTSSLLMFQLLFGLIAGVATAAIFPPVMATVTGWFDTHRSLAVSLVSAGMGVAPMTMSPLAAWLVSSYD
WRTAMQCIAAVVAAIMIPTSLLVGRPPLSAPGDVVASGADAGPAEMTRSAALRSPQFLILLATNFFCCATHSGPIIHTVS
YAVTCGIPLMAAVTIYSVEGLAGLGGRIAFGLLGDRFGAKRVLVLGLLAQAFGALAYVAVRDLAAFYAVAATFGFLYAGT
MPLYASIARDNFPQGIMGTVIGGTAMAGSLGMATGPLAGGLIYDSFASYTWLYVGSWIMGLGAVLMMMTFRPFPKAQSAM
APAQAPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI42475555, Length=366, Percent_Identity=28.4153005464481, Blast_Score=99, Evalue=7e-21,
Organism=Escherichia coli, GI1789969, Length=374, Percent_Identity=21.3903743315508, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41810; Mature: 41679

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50850 MFS ; PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSLYRWVIVGAGGVLGCVAVGGLFSLPVFLKPMAAATGWSVAGISSALTIGFLAMACT
CCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SMAWGTLSDRIGPRPVLLIGSTLLALSLLLASLTSSLLMFQLLFGLIAGVATAAIFPPVM
HHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVTGWFDTHRSLAVSLVSAGMGVAPMTMSPLAAWLVSSYDWRTAMQCIAAVVAAIMIPT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SLLVGRPPLSAPGDVVASGADAGPAEMTRSAALRSPQFLILLATNFFCCATHSGPIIHTV
HHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCEEHHH
SYAVTCGIPLMAAVTIYSVEGLAGLGGRIAFGLLGDRFGAKRVLVLGLLAQAFGALAYVA
HHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VRDLAAFYAVAATFGFLYAGTMPLYASIARDNFPQGIMGTVIGGTAMAGSLGMATGPLAG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCCCCCCCCCC
GLIYDSFASYTWLYVGSWIMGLGAVLMMMTFRPFPKAQSAMAPAQAPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC
>Mature Secondary Structure 
STSLYRWVIVGAGGVLGCVAVGGLFSLPVFLKPMAAATGWSVAGISSALTIGFLAMACT
CCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SMAWGTLSDRIGPRPVLLIGSTLLALSLLLASLTSSLLMFQLLFGLIAGVATAAIFPPVM
HHHHCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATVTGWFDTHRSLAVSLVSAGMGVAPMTMSPLAAWLVSSYDWRTAMQCIAAVVAAIMIPT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SLLVGRPPLSAPGDVVASGADAGPAEMTRSAALRSPQFLILLATNFFCCATHSGPIIHTV
HHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEEEECCEEEEECCCCCEEHHH
SYAVTCGIPLMAAVTIYSVEGLAGLGGRIAFGLLGDRFGAKRVLVLGLLAQAFGALAYVA
HHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
VRDLAAFYAVAATFGFLYAGTMPLYASIARDNFPQGIMGTVIGGTAMAGSLGMATGPLAG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCHHHHCCCCCCCCCCCC
GLIYDSFASYTWLYVGSWIMGLGAVLMMMTFRPFPKAQSAMAPAQAPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]