| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343328
Identifier: 146343328
GI number: 146343328
Start: 6802946
End: 6803632
Strand: Reverse
Name: 146343328
Synonym: BRADO6554
Alternate gene names: NA
Gene position: 6803632-6802946 (Counterclockwise)
Preceding gene: 146343329
Following gene: 146343327
Centisome position: 91.24
GC content: 70.01
Gene sequence:
>687_bases ATGAGCATCAACGTCGCCGGCATTTCCTCGATGGCGACCCGGCAGATCCTGGCCGAGCTCGCGGCCGCCTATGAGGAGGC GACCGGGGAGGTGATCACGATCGAATCCGTCGGCGGCGTCGATGCCGCCAAGCGCATCCGCGCCGGCGAGGCGTTCGACT TCGCGGTGCTCGCCTCCGATGCGCTGCAGAAGCTCGAGGCCGACGGCCATCTCGTTCCCGGCAGCATCATCGAGATCGCG GAATCGCCGATGGCGATGGCGGTGCGCGCCGGCCGACCCAAACCCGATCCGCTCGACGAGGCCGCCGTGCGCAAGGCGAT GGAGAGCGCCAAGGCGATCGGCATCTCCACCGGCCCGAGCGGCACCCATGTGCAGAAGCTCGCCCGCGATTGGGGGCTGG AGAGCGAGGGCTCGCGCCTAGTTCAGGCCAAGCCCGGCATCCCGGTCGCGAAGCTGCTCGCCGACGGCGAGGTGGATGTC GGCTTCCAGCAGCTCAGCGAGATGCTCGGCGCCCCGGGCATCGACATCGTCGGCCTGCTGCCCGAGGCGCTACAGCCGGG CACGGTGTTCGCCGCCGCGCTGTGCAAGGCGGGCGCGCACGCCGACGCCGCCCGCGCCTTCATCGAATATCTCGTCTCCG ACGAGACCGCCGAAACCAAGCGCCAGCACGGCATGACGCCGGTGTGA
Upstream 100 bases:
>100_bases GCGATCGCATCCCCCATCTTGCTCCGCCGTCCGGCATGCCATATCCGATCATCATCCCGCACAAAGCCTGCGTGCGAAAC GACATCGAAACGGAGCCCCC
Downstream 100 bases:
>100_bases GCCGGCGCAGGAGAGCGGGTTCCGCTCGTGCTTCGCGAAAAACCCTCTGGCGCCTGTCGTCCCGGTGATCGCTCGCTCGT CTTCCAGATGTCATCTGCAG
Product: putative extracellular metal-binding protein
Products: NA
Alternate protein names: ABC Transporter Periplasmic Molybdate; ABC Transporter; PROX Protein
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MSINVAGISSMATRQILAELAAAYEEATGEVITIESVGGVDAAKRIRAGEAFDFAVLASDALQKLEADGHLVPGSIIEIA ESPMAMAVRAGRPKPDPLDEAAVRKAMESAKAIGISTGPSGTHVQKLARDWGLESEGSRLVQAKPGIPVAKLLADGEVDV GFQQLSEMLGAPGIDIVGLLPEALQPGTVFAAALCKAGAHADAARAFIEYLVSDETAETKRQHGMTPV
Sequences:
>Translated_228_residues MSINVAGISSMATRQILAELAAAYEEATGEVITIESVGGVDAAKRIRAGEAFDFAVLASDALQKLEADGHLVPGSIIEIA ESPMAMAVRAGRPKPDPLDEAAVRKAMESAKAIGISTGPSGTHVQKLARDWGLESEGSRLVQAKPGIPVAKLLADGEVDV GFQQLSEMLGAPGIDIVGLLPEALQPGTVFAAALCKAGAHADAARAFIEYLVSDETAETKRQHGMTPV >Mature_227_residues SINVAGISSMATRQILAELAAAYEEATGEVITIESVGGVDAAKRIRAGEAFDFAVLASDALQKLEADGHLVPGSIIEIAE SPMAMAVRAGRPKPDPLDEAAVRKAMESAKAIGISTGPSGTHVQKLARDWGLESEGSRLVQAKPGIPVAKLLADGEVDVG FQQLSEMLGAPGIDIVGLLPEALQPGTVFAAALCKAGAHADAARAFIEYLVSDETAETKRQHGMTPV
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23579; Mature: 23448
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINVAGISSMATRQILAELAAAYEEATGEVITIESVGGVDAAKRIRAGEAFDFAVLASD CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHH ALQKLEADGHLVPGSIIEIAESPMAMAVRAGRPKPDPLDEAAVRKAMESAKAIGISTGPS HHHHHHCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC GTHVQKLARDWGLESEGSRLVQAKPGIPVAKLLADGEVDVGFQQLSEMLGAPGIDIVGLL CHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHC PEALQPGTVFAAALCKAGAHADAARAFIEYLVSDETAETKRQHGMTPV HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCC >Mature Secondary Structure SINVAGISSMATRQILAELAAAYEEATGEVITIESVGGVDAAKRIRAGEAFDFAVLASD CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHH ALQKLEADGHLVPGSIIEIAESPMAMAVRAGRPKPDPLDEAAVRKAMESAKAIGISTGPS HHHHHHCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC GTHVQKLARDWGLESEGSRLVQAKPGIPVAKLLADGEVDVGFQQLSEMLGAPGIDIVGLL CHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHC PEALQPGTVFAAALCKAGAHADAARAFIEYLVSDETAETKRQHGMTPV HHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA