| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343316
Identifier: 146343316
GI number: 146343316
Start: 6793184
End: 6793756
Strand: Reverse
Name: 146343316
Synonym: BRADO6541
Alternate gene names: NA
Gene position: 6793756-6793184 (Counterclockwise)
Preceding gene: 146343317
Following gene: 146343311
Centisome position: 91.11
GC content: 65.27
Gene sequence:
>573_bases TTGTCCCGCCCCACCCGCGCTCAGGACGCCGACGAGCCCGACGAAGCGTCGGTGCTGCGCGATCCCGACGCGCCGGTGCT CGGCAACGCCGCAGGCGACATCGCGATCGTCGAATGGTTCGACTACAACTGTCCGTATTGCCGCAAGCTCGATCCCGAGC TCCAGCAGGTCGTGCATGACGACGGCAAGGTTCGCTGGGTCATGAAGGAATGGCCGATCCTCGGACCTGTTTCGGTAACC GCGGCGCGGATGGCGCTCGCCACCAAGTATCAGGACAAATATGCCAAGGCGCATGACGCGCTGATCGGCGTCAGCTCCAA GCTCACGGAAACGCGCATCGACGAGCTGCTCGCCGAAGCCGGCATCGATGTCGATCGCGCCAAGCGCGATCTTGCGACCA ACGGCAAGGCGATCGACGCGATGCTGGCGCGCAACGACAGCCAAGCGCGCGGCCTGCGCTTCCGCGGCACGCCGTCCTTC ATCGTCGGCAAGTTCAGGGTGCCGGGCGTGCTGACCATGGCGCAGTTCGAGCAGGTGATCGCCGATGCACGCAAGGCCAA AGCGGCCAATTAG
Upstream 100 bases:
>100_bases GCTGACGATTATGACACGCCGTCCGTCGACCACGATCGTCCAGGCCAGCAGCCGGCGCGAGCTTCTTTCGCTTTTTGGCG CCGGAGCCGCGCTGTCGCTT
Downstream 100 bases:
>100_bases GAGCAAAGCAAAGGACGCCCCGACACGAGGTCGAGGCGCCCTGCAAACGAGCGGTGCTGCGCGTTACTTCGACGAGATGC GAACCCAGTCGTCATGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Dsba Oxidoreductase; ThiolDisulfide Interchange Protein DsbA; Protein-Disulfide Isomerase; DSBA-Like Thioredoxin Domain Protein; DsbA Oxidoreductase; Twin-Arginine Translocation Pathway Signal; 27kDa Outer Membrane Protein; Thioredoxin Domain Protein; 27 KDa Outer Membrane Protein; DSBA-Like Thioredoxin Domain-Containing Protein; Suppressor For Copper-Sensitivity C; Disulfide Bond Formation Protein D; DsbA-Like Disulfide Oxidoreductase; Disulfide Oxidoreductase; Dsba Oxidoreductase Family Protein; Secreted Protein Suppressor For Copper-Sensitivity ScsC; ThiolDisulfide Oxidoreductase; Secreted Protein Suppressor For Copper-Sensitivity C; Oxidoreductase; DSBA Family Oxidoreductase; Thioredoxin Domain-Containing Protein; BcfH Protein; Dsba-Like Thioredoxin Domain Protein; ThiolDisulfide Interchange Protein; DSBA Thioredoxin Domain-Containing Protein; Metal Resistance Protein; Disulfide Bonded Thioredoxin Protein; Secreted Copper-Sensitivity Suppressor C; Fis Family Transcriptional Regulator; Secreted Protein
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MSRPTRAQDADEPDEASVLRDPDAPVLGNAAGDIAIVEWFDYNCPYCRKLDPELQQVVHDDGKVRWVMKEWPILGPVSVT AARMALATKYQDKYAKAHDALIGVSSKLTETRIDELLAEAGIDVDRAKRDLATNGKAIDAMLARNDSQARGLRFRGTPSF IVGKFRVPGVLTMAQFEQVIADARKAKAAN
Sequences:
>Translated_190_residues MSRPTRAQDADEPDEASVLRDPDAPVLGNAAGDIAIVEWFDYNCPYCRKLDPELQQVVHDDGKVRWVMKEWPILGPVSVT AARMALATKYQDKYAKAHDALIGVSSKLTETRIDELLAEAGIDVDRAKRDLATNGKAIDAMLARNDSQARGLRFRGTPSF IVGKFRVPGVLTMAQFEQVIADARKAKAAN >Mature_189_residues SRPTRAQDADEPDEASVLRDPDAPVLGNAAGDIAIVEWFDYNCPYCRKLDPELQQVVHDDGKVRWVMKEWPILGPVSVTA ARMALATKYQDKYAKAHDALIGVSSKLTETRIDELLAEAGIDVDRAKRDLATNGKAIDAMLARNDSQARGLRFRGTPSFI VGKFRVPGVLTMAQFEQVIADARKAKAAN
Specific function: Unknown
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20896; Mature: 20765
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPTRAQDADEPDEASVLRDPDAPVLGNAAGDIAIVEWFDYNCPYCRKLDPELQQVVHD CCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCC DGKVRWVMKEWPILGPVSVTAARMALATKYQDKYAKAHDALIGVSSKLTETRIDELLAEA CCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GIDVDRAKRDLATNGKAIDAMLARNDSQARGLRFRGTPSFIVGKFRVPGVLTMAQFEQVI CCCHHHHHHHHHCCCHHHHHHHHCCCCHHCCEEECCCCCEEEEEECCCCCHHHHHHHHHH ADARKAKAAN HHHHHHCCCC >Mature Secondary Structure SRPTRAQDADEPDEASVLRDPDAPVLGNAAGDIAIVEWFDYNCPYCRKLDPELQQVVHD CCCCCCCCCCCCCCCCEECCCCCCEECCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCC DGKVRWVMKEWPILGPVSVTAARMALATKYQDKYAKAHDALIGVSSKLTETRIDELLAEA CCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GIDVDRAKRDLATNGKAIDAMLARNDSQARGLRFRGTPSFIVGKFRVPGVLTMAQFEQVI CCCHHHHHHHHHCCCHHHHHHHHCCCCHHCCEEECCCCCEEEEEECCCCCHHHHHHHHHH ADARKAKAAN HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA