| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343297
Identifier: 146343297
GI number: 146343297
Start: 6770848
End: 6772389
Strand: Reverse
Name: 146343297
Synonym: BRADO6520
Alternate gene names: NA
Gene position: 6772389-6770848 (Counterclockwise)
Preceding gene: 146343299
Following gene: 146343296
Centisome position: 90.82
GC content: 69.13
Gene sequence:
>1542_bases GTGAACTCGAGTCGAGGTGTCGTGGACATGAAGCGCGGAACGACCGATCTCCAGTTGCGTCGACGGCACGTGGATCAAAC CTTCGATCCGCGCACCTGGCGCGAACGGCAGCTCACGCGGGCCACGCCCTTCTACGGCTCAGAGCTGTTTCAACTCGGCT GTCCGCCGCTCGCCTCCTTCATCGCCGCCTTCCTCGGATGCCTGATGACCTTGCATCTGAGCGCATCGGGCTTGTCGCCG CCGGTCGCGTCGGCAATGGCTGCGATGCTGTTGTGTGCGTCGCTGATCCTGACGCGGACGGTCGACCTCGTGCCGAGCAC GTTCTTCTCCTCGGCCTATGGTGGCAGCTTCGTCGGCATGACCCCGGTCGTGCTGTTGAACGCGAGCGTCATCCGCGCCG GCCTGCCGCTCGATGCAGCCTTCACTCTGCTGTCGCTGTTCACGGGACTGATGTTCTGCCTCGGCTGCGCGCTCGACATG TGGCTGCGCGGCGGGCTTGCCCGCGGCTATGGCGGACGGCTCGGGGCGCTTGCCGCCGTTGCCTCCTTCCTGTTCGTCGG GCTGGCGCCGATGCTGGGCGCGGAGGGCGAGTTGTTTCCGATCGCACGCCGCCCCATGCCGGAATTGGGGCTCGTGGCAG CCGCGACCACCTTCCTGCTGTGCACGGCGGGCATGCTGGCAACGATGGCGGCGCTGCGCTGGGCTCCAGTTGCGGGATCG CGACGCGCGGTCCGCATCTTCGTGGCCGCCACCGTGGCGTTCGCCGGCCTCGTCCTGCTGCTGCAATTCGTTCCCGCCAA CGCCGCCGAGCTCGATGCCTATTACGCCGGCTGCTTCCTCGGCATGTCGTCGCAGCGTCGGCTGCGCAGCCTGCTGCAGG CATTGTCTGCCGCGGTGCTGCTGACCGCGCTGTTGATGATGACCTGTCCGATGCTTCCTGCTGTCGGCGGCAGCCTCGGC TATGTCGCCTTCGTGTCGGTGATCTTCGTCGACGCCGCGGTCCGGCTGTTCATCGAGGCCGGCGAATCGCCGCGCCAGTC CATGATCGCGTGGGGACGGGGGCTCGCCGCCGCGATCGCCGTTCTCGTCGCGCTGCTCTTCAGTGAGCTGTGGTTCGCTC CCCCGCAGATCCAGCCAACCGGCTCGATCGCCAAGACGCAGACGCCGCCTGCGCCTGCCGTGCGGCCGCCTCCACCGATC GCGGAGGCGACGCGCGATGCGGCTCTGTCGGTCGCCGGCGAGCCGCCGACATCAGCCGCTGCGGTGCCCGATCTGCCGAT CCAGATCCTGCGTCCCGACGGCGCGCTCTTTGCCGCCCCTCGGTCCGGCGAGATCGTCCCGCGCGCGCCATCGCCTGTGG CAGAGCCGACCCGCCGCGTCGTGCGCTACGGCCAGGCTGCGACCGCGCCGGCTATGCCGGCCAGGCGCAACCAGAACCAT GTGGTGCCGCGTCCGGCGGCACGGCCGAAATTCGTGGCACGGCAGGATGTCCAGTCTGCGCCGGAGTGGAGGCCCCTTTC GTCCACATCGGCGGGGCCGTGA
Upstream 100 bases:
>100_bases TGCAGCGTGCATACAACCGCCGCAGGTCACTGCGACGGGTCGGGCTCAAGGTTGCGCCCGAAACGTCCGCCGGCCCTGCC GCAATAACAAACGAATTCGG
Downstream 100 bases:
>100_bases CGGCGGACTGTAAGCCTTTCTGCGGCGATAACCCGGTGCCGCCACAGGTTCGCACGTGTTTCGCCATGTTTCCGCGTCAA CATGCATTACGCGGTGCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MNSSRGVVDMKRGTTDLQLRRRHVDQTFDPRTWRERQLTRATPFYGSELFQLGCPPLASFIAAFLGCLMTLHLSASGLSP PVASAMAAMLLCASLILTRTVDLVPSTFFSSAYGGSFVGMTPVVLLNASVIRAGLPLDAAFTLLSLFTGLMFCLGCALDM WLRGGLARGYGGRLGALAAVASFLFVGLAPMLGAEGELFPIARRPMPELGLVAAATTFLLCTAGMLATMAALRWAPVAGS RRAVRIFVAATVAFAGLVLLLQFVPANAAELDAYYAGCFLGMSSQRRLRSLLQALSAAVLLTALLMMTCPMLPAVGGSLG YVAFVSVIFVDAAVRLFIEAGESPRQSMIAWGRGLAAAIAVLVALLFSELWFAPPQIQPTGSIAKTQTPPAPAVRPPPPI AEATRDAALSVAGEPPTSAAAVPDLPIQILRPDGALFAAPRSGEIVPRAPSPVAEPTRRVVRYGQAATAPAMPARRNQNH VVPRPAARPKFVARQDVQSAPEWRPLSSTSAGP
Sequences:
>Translated_513_residues MNSSRGVVDMKRGTTDLQLRRRHVDQTFDPRTWRERQLTRATPFYGSELFQLGCPPLASFIAAFLGCLMTLHLSASGLSP PVASAMAAMLLCASLILTRTVDLVPSTFFSSAYGGSFVGMTPVVLLNASVIRAGLPLDAAFTLLSLFTGLMFCLGCALDM WLRGGLARGYGGRLGALAAVASFLFVGLAPMLGAEGELFPIARRPMPELGLVAAATTFLLCTAGMLATMAALRWAPVAGS RRAVRIFVAATVAFAGLVLLLQFVPANAAELDAYYAGCFLGMSSQRRLRSLLQALSAAVLLTALLMMTCPMLPAVGGSLG YVAFVSVIFVDAAVRLFIEAGESPRQSMIAWGRGLAAAIAVLVALLFSELWFAPPQIQPTGSIAKTQTPPAPAVRPPPPI AEATRDAALSVAGEPPTSAAAVPDLPIQILRPDGALFAAPRSGEIVPRAPSPVAEPTRRVVRYGQAATAPAMPARRNQNH VVPRPAARPKFVARQDVQSAPEWRPLSSTSAGP >Mature_513_residues MNSSRGVVDMKRGTTDLQLRRRHVDQTFDPRTWRERQLTRATPFYGSELFQLGCPPLASFIAAFLGCLMTLHLSASGLSP PVASAMAAMLLCASLILTRTVDLVPSTFFSSAYGGSFVGMTPVVLLNASVIRAGLPLDAAFTLLSLFTGLMFCLGCALDM WLRGGLARGYGGRLGALAAVASFLFVGLAPMLGAEGELFPIARRPMPELGLVAAATTFLLCTAGMLATMAALRWAPVAGS RRAVRIFVAATVAFAGLVLLLQFVPANAAELDAYYAGCFLGMSSQRRLRSLLQALSAAVLLTALLMMTCPMLPAVGGSLG YVAFVSVIFVDAAVRLFIEAGESPRQSMIAWGRGLAAAIAVLVALLFSELWFAPPQIQPTGSIAKTQTPPAPAVRPPPPI AEATRDAALSVAGEPPTSAAAVPDLPIQILRPDGALFAAPRSGEIVPRAPSPVAEPTRRVVRYGQAATAPAMPARRNQNH VVPRPAARPKFVARQDVQSAPEWRPLSSTSAGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54017; Mature: 54017
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSRGVVDMKRGTTDLQLRRRHVDQTFDPRTWRERQLTRATPFYGSELFQLGCPPLASF CCCCCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHH IAAFLGCLMTLHLSASGLSPPVASAMAAMLLCASLILTRTVDLVPSTFFSSAYGGSFVGM HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TPVVLLNASVIRAGLPLDAAFTLLSLFTGLMFCLGCALDMWLRGGLARGYGGRLGALAAV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ASFLFVGLAPMLGAEGELFPIARRPMPELGLVAAATTFLLCTAGMLATMAALRWAPVAGS HHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RRAVRIFVAATVAFAGLVLLLQFVPANAAELDAYYAGCFLGMSSQRRLRSLLQALSAAVL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LTALLMMTCPMLPAVGGSLGYVAFVSVIFVDAAVRLFIEAGESPRQSMIAWGRGLAAAIA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH VLVALLFSELWFAPPQIQPTGSIAKTQTPPAPAVRPPPPIAEATRDAALSVAGEPPTSAA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCC AVPDLPIQILRPDGALFAAPRSGEIVPRAPSPVAEPTRRVVRYGQAATAPAMPARRNQNH CCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC VVPRPAARPKFVARQDVQSAPEWRPLSSTSAGP CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNSSRGVVDMKRGTTDLQLRRRHVDQTFDPRTWRERQLTRATPFYGSELFQLGCPPLASF CCCCCCCEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHHH IAAFLGCLMTLHLSASGLSPPVASAMAAMLLCASLILTRTVDLVPSTFFSSAYGGSFVGM HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TPVVLLNASVIRAGLPLDAAFTLLSLFTGLMFCLGCALDMWLRGGLARGYGGRLGALAAV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH ASFLFVGLAPMLGAEGELFPIARRPMPELGLVAAATTFLLCTAGMLATMAALRWAPVAGS HHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RRAVRIFVAATVAFAGLVLLLQFVPANAAELDAYYAGCFLGMSSQRRLRSLLQALSAAVL CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LTALLMMTCPMLPAVGGSLGYVAFVSVIFVDAAVRLFIEAGESPRQSMIAWGRGLAAAIA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHH VLVALLFSELWFAPPQIQPTGSIAKTQTPPAPAVRPPPPIAEATRDAALSVAGEPPTSAA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCCCCC AVPDLPIQILRPDGALFAAPRSGEIVPRAPSPVAEPTRRVVRYGQAATAPAMPARRNQNH CCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC VVPRPAARPKFVARQDVQSAPEWRPLSSTSAGP CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA