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The map label for this gene is crtY [H]

Identifier: 146343287

GI number: 146343287

Start: 6756592

End: 6757776

Strand: Reverse

Name: crtY [H]

Synonym: BRADO6508

Alternate gene names: 146343287

Gene position: 6757776-6756592 (Counterclockwise)

Preceding gene: 146343295

Following gene: 146343286

Centisome position: 90.63

GC content: 67.85

Gene sequence:

>1185_bases
ATGAGTCGAGATGCCGACGTCATCGTCATCGGCGGCGGTCTTGCCGGCTGCCTGATCGCCTTGCGGCTCACCGACGCACG
GCCGGATCTGCGCGTCGTCATCATCGAAGGCTCGGCCAGCATCGCCGGCAATCACACCTGGAGCTTCTTTGGAACCGATA
TCTCGTCCGACCAGCACGCCTGGCTCGGACGGCTCGTCGGTCATCGCTGGCCGGGTTATGAGGTGCGCTTCGCCGAACAT
GCCATCCGTCTGTCGACCGCCTACCTCTCCATGACGTCGACGCGGCTGCGTGCCGAGGTCGAGCAGCGTTTTCCGGAGAG
GATCCTGCGCGACGCGACGGCCATCTCCGCAACGGCAGACCATGTCGTGCTGGAGGGCGGCCGCACCTTGCGCGCGCCCT
GCGTGATCGATGCGCGCGGCGGCCGGCCGGTGCCGGGGCTCGCTCTCGGGTTTCAGAAGTTCCTCGGGCTCGAGGTGCGG
CTGGCCGCGCCGCACGGCCTCGATGTGCCCATCGTGATGGACGCGACGGTCGCGCAGAGCGACGGCTATCGCTTCGTCTA
CACGCTGCCGCTCGACCCTCAGCGGCTGTTGATCGAGGACACCTACTATAGCGACGGCGGCGAGTTGCCCGAGCAGGTGC
TGCATCAGCGCATCGCGCGCTACGCGCTCGCCAAGGGCTGGCAGATCGCCGAGATCATCCGCGCGGAGCAGGGTGTGCTG
CCCGTCATTCTGGCGGGCGATCCGTCCGGGCTGGTCAGCAAGCCCGACAGCCCGCCGCGCGTGGGTCTCGCGGCGCTTCT
CGTGCATCCGACGACCGGCTATTCGCTGCCGGACGCGGTCCGCGTCGCCGATCTGCTGACGGCGCGGCTTGCGCAACGGG
GCGCGCTCTCGAGCGCTGACGCGCGCGAGACGATCGATGGCTACGGCCGGACGATCTGGCGCCGGCGCGGCTACTATCGC
TTCCTGAACCGGATGCTGTTCAAGGCCGCCGAGCCCTCCGAGCGTCACCGAATCCTGGCACGATTTTACGGTCTCGATCA
GGCCCTGATCGAGCGCTTCTACGCCGCCCGGATCCAGCCGCAGGACAAGCTGCGCGTCTTCATGCATATGCTGATGAAGC
CGCCGATCCCGATCTCGTCCGCGCTCGCCTGCCTGCCTGAGGCGAGCGCCTTCAAGACCCCATGA

Upstream 100 bases:

>100_bases
CCGGAGCTTGGCTCGGATCCGAGGTGCGGCATTTTGCTCGGCGCGGTGCACTGTCGGCTCGGCCGGTTATCGCCGCGCGT
GAGCGCGCTGCGTTGTCGTC

Downstream 100 bases:

>100_bases
GTCAAGAGATGCAGAACGCCAAGACAGCAGTGGTGATCGGTTCGGGATTTGGTGGGCTTTCGCTCGCCATACGCCTGCAA
TCGGCCGGGATCGCGACAAC

Product: lycopene cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MSRDADVIVIGGGLAGCLIALRLTDARPDLRVVIIEGSASIAGNHTWSFFGTDISSDQHAWLGRLVGHRWPGYEVRFAEH
AIRLSTAYLSMTSTRLRAEVEQRFPERILRDATAISATADHVVLEGGRTLRAPCVIDARGGRPVPGLALGFQKFLGLEVR
LAAPHGLDVPIVMDATVAQSDGYRFVYTLPLDPQRLLIEDTYYSDGGELPEQVLHQRIARYALAKGWQIAEIIRAEQGVL
PVILAGDPSGLVSKPDSPPRVGLAALLVHPTTGYSLPDAVRVADLLTARLAQRGALSSADARETIDGYGRTIWRRRGYYR
FLNRMLFKAAEPSERHRILARFYGLDQALIERFYAARIQPQDKLRVFMHMLMKPPIPISSALACLPEASAFKTP

Sequences:

>Translated_394_residues
MSRDADVIVIGGGLAGCLIALRLTDARPDLRVVIIEGSASIAGNHTWSFFGTDISSDQHAWLGRLVGHRWPGYEVRFAEH
AIRLSTAYLSMTSTRLRAEVEQRFPERILRDATAISATADHVVLEGGRTLRAPCVIDARGGRPVPGLALGFQKFLGLEVR
LAAPHGLDVPIVMDATVAQSDGYRFVYTLPLDPQRLLIEDTYYSDGGELPEQVLHQRIARYALAKGWQIAEIIRAEQGVL
PVILAGDPSGLVSKPDSPPRVGLAALLVHPTTGYSLPDAVRVADLLTARLAQRGALSSADARETIDGYGRTIWRRRGYYR
FLNRMLFKAAEPSERHRILARFYGLDQALIERFYAARIQPQDKLRVFMHMLMKPPIPISSALACLPEASAFKTP
>Mature_393_residues
SRDADVIVIGGGLAGCLIALRLTDARPDLRVVIIEGSASIAGNHTWSFFGTDISSDQHAWLGRLVGHRWPGYEVRFAEHA
IRLSTAYLSMTSTRLRAEVEQRFPERILRDATAISATADHVVLEGGRTLRAPCVIDARGGRPVPGLALGFQKFLGLEVRL
AAPHGLDVPIVMDATVAQSDGYRFVYTLPLDPQRLLIEDTYYSDGGELPEQVLHQRIARYALAKGWQIAEIIRAEQGVLP
VILAGDPSGLVSKPDSPPRVGLAALLVHPTTGYSLPDAVRVADLLTARLAQRGALSSADARETIDGYGRTIWRRRGYYRF
LNRMLFKAAEPSERHRILARFYGLDQALIERFYAARIQPQDKLRVFMHMLMKPPIPISSALACLPEASAFKTP

Specific function: Catalyzes the cyclization reaction which converts lycopene to beta-carotene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008461
- InterPro:   IPR010108
- InterPro:   IPR008671
- InterPro:   IPR016040 [H]

Pfam domain/function: PF05834 Lycopene_cycl [H]

EC number: NA

Molecular weight: Translated: 43436; Mature: 43304

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDADVIVIGGGLAGCLIALRLTDARPDLRVVIIEGSASIAGNHTWSFFGTDISSDQHA
CCCCCCEEEECCCHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHH
WLGRLVGHRWPGYEVRFAEHAIRLSTAYLSMTSTRLRAEVEQRFPERILRDATAISATAD
HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HVVLEGGRTLRAPCVIDARGGRPVPGLALGFQKFLGLEVRLAAPHGLDVPIVMDATVAQS
EEEEECCCEEECCEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEECEEECC
DGYRFVYTLPLDPQRLLIEDTYYSDGGELPEQVLHQRIARYALAKGWQIAEIIRAEQGVL
CCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
PVILAGDPSGLVSKPDSPPRVGLAALLVHPTTGYSLPDAVRVADLLTARLAQRGALSSAD
EEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
ARETIDGYGRTIWRRRGYYRFLNRMLFKAAEPSERHRILARFYGLDQALIERFYAARIQP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC
QDKLRVFMHMLMKPPIPISSALACLPEASAFKTP
HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SRDADVIVIGGGLAGCLIALRLTDARPDLRVVIIEGSASIAGNHTWSFFGTDISSDQHA
CCCCCEEEECCCHHHHEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCHHH
WLGRLVGHRWPGYEVRFAEHAIRLSTAYLSMTSTRLRAEVEQRFPERILRDATAISATAD
HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HVVLEGGRTLRAPCVIDARGGRPVPGLALGFQKFLGLEVRLAAPHGLDVPIVMDATVAQS
EEEEECCCEEECCEEEECCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEECEEECC
DGYRFVYTLPLDPQRLLIEDTYYSDGGELPEQVLHQRIARYALAKGWQIAEIIRAEQGVL
CCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCE
PVILAGDPSGLVSKPDSPPRVGLAALLVHPTTGYSLPDAVRVADLLTARLAQRGALSSAD
EEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
ARETIDGYGRTIWRRRGYYRFLNRMLFKAAEPSERHRILARFYGLDQALIERFYAARIQP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCC
QDKLRVFMHMLMKPPIPISSALACLPEASAFKTP
HHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]