| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343295
Identifier: 146343295
GI number: 146343295
Start: 6767025
End: 6768647
Strand: Reverse
Name: 146343295
Synonym: BRADO6517
Alternate gene names: NA
Gene position: 6768647-6767025 (Counterclockwise)
Preceding gene: 146343296
Following gene: 146343287
Centisome position: 90.77
GC content: 70.06
Gene sequence:
>1623_bases GTGTTCACCGCCTCCAGCCTGCCGCGAGTGGCCGCAAGGGGTGAAGAGCAAATGGCTGATTCGCGTGCGGGTGATGCGCA GAACCCCGCGGCTTTCGATCCGCTGGTGTGGCGCGAAGGTCTGCCGCCGTTGTCCGAGCCGGGTCCTCACGCCTGGCCGC GCTTCGGACTCTCTATCGTCCCTGTGGCCTCGTTTGCCGGCGCATTTCTCGGCTGCATGGCGACGCTGCAACTGACGACC TACGGTCTGCCGTCGCCGCTCGCCTCGGCCGCGGTGACGCTGCTGCTGTGTGCCGGCCTGATCATCGCGCCGACCAGAAA CCTGGAAGCGACGACGTTCTCCTCCTCGGTCTATGGCGGCAGCTTCAGCGGAATGACGCCGGTCGGGATCGTCGTCGCGA GCGTGGCCCAGGCCGGTCTGCCGGACGAGGCGTCATTCTTCCTGCTGTCGGCCTTTTGCGGACTGTTGTTCGCCATCCTG ACTTTGACTGAAGTCCGGCTGCGCGTGGTGCTGCTGCAAGGCTATGGCGGGCGCCTCGGTGTGCTCGCGGCGATCGCATC GCTGCTGTTCCTGTGTCTGATGCCGTTGCTCGGTAATGGCAGCGACATGCTGCGGCTGGCGCATCTGGATCATTTCGACA AGGGTCTGGAGGCCTCGCTCGCGATCTTCGCAACGTGCCTGGCCGGCACGGCGCTGACCCTGGTGATGCTGCGGCTGCCG ACCGTTGCCGGGGCCGGCCGGGCCGGGCGTACATTCGTTTCGGCGGTGATCGCTTTCACGGGCATGGCGGTCCTGCAGGC GCTTCTGCCTGACGAGCGCTGCCTCATCGACGCCTATTACGCCGGATGTTTTCTCGGCATGTCCTCGCCGCAGCGGCTCT CCGGCCGGTTCGCACCGGTCGTCGCCGCGGCGACGCTGACGGTCCTGCTGGTTCAGGCCGCGACGGTGCTGCCGCTGGTT GGCGGCAGCCTGGGCTTTGCGGCCTTCGTCACCGTGGCCGTGCTTGACCTGCTGAGCCGCGCAGCCCTCGGTCTCAGCCC GAGCCGGCATGGGGCCGCGACGCTCGTGCTCAGAAGCCTGACCCTTGTGGCTGCCATTGCCGCGCTGCTGTTGCCGACCG AACTGTTCCGGGAGGAGATCGATCTCGCGCCGACAGGCTCCATCGCGCAGCAGGACTCTCCGCTGCCGCTCGCAACTCCG TCCGACGTGCCTGCGCCCGAGCCCGCCCCCAATCCTCCCGCATCGGTGGCTGCAAGCGTTCCAAGCGACCGCGCCCCGGC GAGTGCCACGCCGAAGCCCGACATTGCGCCTCCGATGGTGCAGCCGGCGCGCAGCGCCGCGCAACCGGCCAAGCCGCGCC GGCGTGCTGCCGCGTCCACAGCCGCCGCGCCGCCGACCTCCCCTGTCGAGCCCGCGCCGCCGCAGCGGACTACGCGTGCC GTCCAGCGTCCGGCGCCGGCTGGGGCCGGCACCGTCGGAGTGAATACATCCGCGAGCGTCCCGACCGTGTCGACCCGGCG CGCAGCCGCGCGCCCGCCGGGTGTTTCGTCATCGTCGCAAGCGCCGCGGCGAGAGGGGCTGCGCGCGCAGGAAGCCGCGG CGGCACCCGCGGCGGAGCGATGA
Upstream 100 bases:
>100_bases CGGGTTTGCGGCATGGAGGCCGCGCCCGGCAGGTCGGAGCTGAGTGTGTGCTCGCGCCTGACTGCTGCTGACAACGAGAT CGCCCCGGGCATGCAGCGAG
Downstream 100 bases:
>100_bases GCCGGCGGATCAGCCGAACTTGCGCCGCGCGTCGAGCGCGAGCCCGAGGCCGACGCTGCCGAGCAGGTCGGTCTCGGCGA TGCGCGCGTCCGGAAACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MFTASSLPRVAARGEEQMADSRAGDAQNPAAFDPLVWREGLPPLSEPGPHAWPRFGLSIVPVASFAGAFLGCMATLQLTT YGLPSPLASAAVTLLLCAGLIIAPTRNLEATTFSSSVYGGSFSGMTPVGIVVASVAQAGLPDEASFFLLSAFCGLLFAIL TLTEVRLRVVLLQGYGGRLGVLAAIASLLFLCLMPLLGNGSDMLRLAHLDHFDKGLEASLAIFATCLAGTALTLVMLRLP TVAGAGRAGRTFVSAVIAFTGMAVLQALLPDERCLIDAYYAGCFLGMSSPQRLSGRFAPVVAAATLTVLLVQAATVLPLV GGSLGFAAFVTVAVLDLLSRAALGLSPSRHGAATLVLRSLTLVAAIAALLLPTELFREEIDLAPTGSIAQQDSPLPLATP SDVPAPEPAPNPPASVAASVPSDRAPASATPKPDIAPPMVQPARSAAQPAKPRRRAAASTAAAPPTSPVEPAPPQRTTRA VQRPAPAGAGTVGVNTSASVPTVSTRRAAARPPGVSSSSQAPRREGLRAQEAAAAPAAER
Sequences:
>Translated_540_residues MFTASSLPRVAARGEEQMADSRAGDAQNPAAFDPLVWREGLPPLSEPGPHAWPRFGLSIVPVASFAGAFLGCMATLQLTT YGLPSPLASAAVTLLLCAGLIIAPTRNLEATTFSSSVYGGSFSGMTPVGIVVASVAQAGLPDEASFFLLSAFCGLLFAIL TLTEVRLRVVLLQGYGGRLGVLAAIASLLFLCLMPLLGNGSDMLRLAHLDHFDKGLEASLAIFATCLAGTALTLVMLRLP TVAGAGRAGRTFVSAVIAFTGMAVLQALLPDERCLIDAYYAGCFLGMSSPQRLSGRFAPVVAAATLTVLLVQAATVLPLV GGSLGFAAFVTVAVLDLLSRAALGLSPSRHGAATLVLRSLTLVAAIAALLLPTELFREEIDLAPTGSIAQQDSPLPLATP SDVPAPEPAPNPPASVAASVPSDRAPASATPKPDIAPPMVQPARSAAQPAKPRRRAAASTAAAPPTSPVEPAPPQRTTRA VQRPAPAGAGTVGVNTSASVPTVSTRRAAARPPGVSSSSQAPRREGLRAQEAAAAPAAER >Mature_540_residues MFTASSLPRVAARGEEQMADSRAGDAQNPAAFDPLVWREGLPPLSEPGPHAWPRFGLSIVPVASFAGAFLGCMATLQLTT YGLPSPLASAAVTLLLCAGLIIAPTRNLEATTFSSSVYGGSFSGMTPVGIVVASVAQAGLPDEASFFLLSAFCGLLFAIL TLTEVRLRVVLLQGYGGRLGVLAAIASLLFLCLMPLLGNGSDMLRLAHLDHFDKGLEASLAIFATCLAGTALTLVMLRLP TVAGAGRAGRTFVSAVIAFTGMAVLQALLPDERCLIDAYYAGCFLGMSSPQRLSGRFAPVVAAATLTVLLVQAATVLPLV GGSLGFAAFVTVAVLDLLSRAALGLSPSRHGAATLVLRSLTLVAAIAALLLPTELFREEIDLAPTGSIAQQDSPLPLATP SDVPAPEPAPNPPASVAASVPSDRAPASATPKPDIAPPMVQPARSAAQPAKPRRRAAASTAAAPPTSPVEPAPPQRTTRA VQRPAPAGAGTVGVNTSASVPTVSTRRAAARPPGVSSSSQAPRREGLRAQEAAAAPAAER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55033; Mature: 55033
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTASSLPRVAARGEEQMADSRAGDAQNPAAFDPLVWREGLPPLSEPGPHAWPRFGLSIV CCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCHHH PVASFAGAFLGCMATLQLTTYGLPSPLASAAVTLLLCAGLIIAPTRNLEATTFSSSVYGG HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC SFSGMTPVGIVVASVAQAGLPDEASFFLLSAFCGLLFAILTLTEVRLRVVLLQGYGGRLG CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH VLAAIASLLFLCLMPLLGNGSDMLRLAHLDHFDKGLEASLAIFATCLAGTALTLVMLRLP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TVAGAGRAGRTFVSAVIAFTGMAVLQALLPDERCLIDAYYAGCFLGMSSPQRLSGRFAPV HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHH VAAATLTVLLVQAATVLPLVGGSLGFAAFVTVAVLDLLSRAALGLSPSRHGAATLVLRSL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TLVAAIAALLLPTELFREEIDLAPTGSIAQQDSPLPLATPSDVPAPEPAPNPPASVAASV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECC PSDRAPASATPKPDIAPPMVQPARSAAQPAKPRRRAAASTAAAPPTSPVEPAPPQRTTRA CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VQRPAPAGAGTVGVNTSASVPTVSTRRAAARPPGVSSSSQAPRREGLRAQEAAAAPAAER HHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCC >Mature Secondary Structure MFTASSLPRVAARGEEQMADSRAGDAQNPAAFDPLVWREGLPPLSEPGPHAWPRFGLSIV CCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHCCHHH PVASFAGAFLGCMATLQLTTYGLPSPLASAAVTLLLCAGLIIAPTRNLEATTFSSSVYGG HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC SFSGMTPVGIVVASVAQAGLPDEASFFLLSAFCGLLFAILTLTEVRLRVVLLQGYGGRLG CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHH VLAAIASLLFLCLMPLLGNGSDMLRLAHLDHFDKGLEASLAIFATCLAGTALTLVMLRLP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TVAGAGRAGRTFVSAVIAFTGMAVLQALLPDERCLIDAYYAGCFLGMSSPQRLSGRFAPV HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHH VAAATLTVLLVQAATVLPLVGGSLGFAAFVTVAVLDLLSRAALGLSPSRHGAATLVLRSL HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TLVAAIAALLLPTELFREEIDLAPTGSIAQQDSPLPLATPSDVPAPEPAPNPPASVAASV HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEECC PSDRAPASATPKPDIAPPMVQPARSAAQPAKPRRRAAASTAAAPPTSPVEPAPPQRTTRA CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH VQRPAPAGAGTVGVNTSASVPTVSTRRAAARPPGVSSSSQAPRREGLRAQEAAAAPAAER HHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA