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The map label for this gene is crtB [H]

Identifier: 146343285

GI number: 146343285

Start: 6754071

End: 6755078

Strand: Reverse

Name: crtB [H]

Synonym: BRADO6506

Alternate gene names: 146343285

Gene position: 6755078-6754071 (Counterclockwise)

Preceding gene: 146343286

Following gene: 146343284

Centisome position: 90.59

GC content: 68.35

Gene sequence:

>1008_bases
ATGACGCTGCGCGACAATGACCATCTGGCGCGGCTGAGCGAAGCCGTCATCCGCAACGGCTCGAAGAGTTTCGCAGCCGC
ATCCAAGCTGTTCGATTCCCGCACCCGTGCCAGCGTGCACCTGCTCTACGCCTGGTGCCGGCATTGCGACGACGTCATCG
ACGGACAGGATCTCGGAATTCGGCAGGGCGTCGGCGCGCCTGGCCCGCAGATCGGGACTTTGCAGATGCTGCGCGACCAG
ACGGCGCAGGCGCTGGAGGGGGCGCCGATGCGCGATCCGGTGTTCCAGGGATTGCAGCGCGTCGTGCAGGAGCACGCGAT
TCCGCACCATCACGTGTTCGAGCTGCTCGACGGCTTCGCCATGGATGTCGACGGGCGCGAATACGAGACGCTGAGCGAGA
CGCTGGACTACTGCTATCACGTGGCCGGCGTGGTCGGCGTGATGATGTCGGCGATCATGGGCGCTCGCGAGGAGGCGACG
CTGGACCGCGCGGCCGATCTCGGCATCGCGCTGCAGCTCACCAACATCGCCCGTGACGTGATCGAGGATGCCCAGGCCGG
CCGCATGTATCTGCCGCAGCAATGGCTGTGCGAGGCCGGCGTGCCGGCCGCCGAGGTCGCGGAACCGCAGCATCGGCAGG
CGGTGTTCCGTGTCGTCGCGCGGCTGCTCGATGTCGCGGAGCAGTTTTACGAGGCCAGCGAGGCAGGCATCGCCCGGCTG
CCGGTGCGTTGCGCCTGGGCGGTGGAGACGGCCCGCGTCGTCTATCGCCAGATCGGGCGCGAGGTGATGAAGCGCGGTCC
CGGCGCCTGGGACGCCCGCATCGCCACGACAGGCGCGCAGAAGCTCGGCGCGATCGGCCGCAGCGCATTGACGCTTGGTC
TCACCCGCACCTGGGTTAAGGTGCCCGCGCGCGAGCACAACCTCTGGACCCGCCCGAAGGCGCGGCGCGCCGCCAGTGAC
GCACAAGCGAGCTTTGCCAATGCATGCAGCAACCGCCAAGGCTACTGA

Upstream 100 bases:

>100_bases
CCGGCACCCATCCGGGCGCCGGCATTCCCGGCGTCGTCGGCTCGGCCAAGGCGACCGCGCGAGTCATCCTCGAGGACCAG
CGCGAACTCGCGGAGGCGCA

Downstream 100 bases:

>100_bases
GTTCGGGGCCTCTCGGCGCGACGATGCGAGGCAGCGCCGCGTCGGTCTCACGCTGGCCGCGGTCATCATCGCCGCCTGGC
TGGTGCTGCATGTCGGTCTG

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTLRDNDHLARLSEAVIRNGSKSFAAASKLFDSRTRASVHLLYAWCRHCDDVIDGQDLGIRQGVGAPGPQIGTLQMLRDQ
TAQALEGAPMRDPVFQGLQRVVQEHAIPHHHVFELLDGFAMDVDGREYETLSETLDYCYHVAGVVGVMMSAIMGAREEAT
LDRAADLGIALQLTNIARDVIEDAQAGRMYLPQQWLCEAGVPAAEVAEPQHRQAVFRVVARLLDVAEQFYEASEAGIARL
PVRCAWAVETARVVYRQIGREVMKRGPGAWDARIATTGAQKLGAIGRSALTLGLTRTWVKVPAREHNLWTRPKARRAASD
AQASFANACSNRQGY

Sequences:

>Translated_335_residues
MTLRDNDHLARLSEAVIRNGSKSFAAASKLFDSRTRASVHLLYAWCRHCDDVIDGQDLGIRQGVGAPGPQIGTLQMLRDQ
TAQALEGAPMRDPVFQGLQRVVQEHAIPHHHVFELLDGFAMDVDGREYETLSETLDYCYHVAGVVGVMMSAIMGAREEAT
LDRAADLGIALQLTNIARDVIEDAQAGRMYLPQQWLCEAGVPAAEVAEPQHRQAVFRVVARLLDVAEQFYEASEAGIARL
PVRCAWAVETARVVYRQIGREVMKRGPGAWDARIATTGAQKLGAIGRSALTLGLTRTWVKVPAREHNLWTRPKARRAASD
AQASFANACSNRQGY
>Mature_334_residues
TLRDNDHLARLSEAVIRNGSKSFAAASKLFDSRTRASVHLLYAWCRHCDDVIDGQDLGIRQGVGAPGPQIGTLQMLRDQT
AQALEGAPMRDPVFQGLQRVVQEHAIPHHHVFELLDGFAMDVDGREYETLSETLDYCYHVAGVVGVMMSAIMGAREEATL
DRAADLGIALQLTNIARDVIEDAQAGRMYLPQQWLCEAGVPAAEVAEPQHRQAVFRVVARLLDVAEQFYEASEAGIARLP
VRCAWAVETARVVYRQIGREVMKRGPGAWDARIATTGAQKLGAIGRSALTLGLTRTWVKVPAREHNLWTRPKARRAASDA
QASFANACSNRQGY

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 36839; Mature: 36708

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TLRDNDHLARLSEAVIRNGSKSFAAASKLFDSRTRASVHLLYAWCRHCDDVIDGQDLGI
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH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CCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]