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The map label for this gene is crtW [H]

Identifier: 146343284

GI number: 146343284

Start: 6753323

End: 6754099

Strand: Reverse

Name: crtW [H]

Synonym: BRADO6505

Alternate gene names: 146343284

Gene position: 6754099-6753323 (Counterclockwise)

Preceding gene: 146343285

Following gene: 146343277

Centisome position: 90.58

GC content: 63.45

Gene sequence:

>777_bases
ATGCATGCAGCAACCGCCAAGGCTACTGAGTTCGGGGCCTCTCGGCGCGACGATGCGAGGCAGCGCCGCGTCGGTCTCAC
GCTGGCCGCGGTCATCATCGCCGCCTGGCTGGTGCTGCATGTCGGTCTGATGTTCTTCTGGCCGCTGACCCTTCACAGCC
TGCTGCCGGCTTTGCCTCTGGTGGTGCTGCAGACCTGGCTCTATGTAGGCCTGTTCATCATCGCGCATGACTGCATGCAC
GGCTCGCTGGTGCCGTTCAAGCCGCAGGTCAACCGCCGTATCGGACAGCTCTGCCTGTTCCTCTATGCCGGGTTCTCCTT
CGACGCTCTCAATGTCGAGCACCACAAGCATCACCGCCATCCCGGCACGGCCGAGGATCCCGATTTCGACGAGGTGCCGC
CGCACGGCTTCTGGCACTGGTTCGCCAGCTTTTTCCTGCACTATTTCGGCTGGAAGCAGGTCGCGATCATCGCAGCCGTC
TCGCTGGTTTATCAGCTCGTCTTCGCCGTTCCCTTGCAGAACATCCTGCTGTTCTGGGCGCTGCCCGGGCTGCTGTCGGC
GCTGCAGCTGTTCACCTTCGGCACCTATCTGCCGCACAAGCCGGCCACGCAGCCCTTCGCCGATCGCCACAACGCGCGGA
CGAGCGAATTTCCCGCGTGGCTGTCGCTGCTGACCTGCTTCCACTTCGGCTTTCATCACGAGCATCATCTGCATCCCGAT
GCGCCGTGGTGGCGGCTGCCGGAGATCAAGCGGCGGGCCCTGGAAAGGCGTGACTAA

Upstream 100 bases:

>100_bases
CTCACCCGCACCTGGGTTAAGGTGCCCGCGCGCGAGCACAACCTCTGGACCCGCCCGAAGGCGCGGCGCGCCGCCAGTGA
CGCACAAGCGAGCTTTGCCA

Downstream 100 bases:

>100_bases
ACCCGCTGCCGCATGCGCAGCACCATCCACGCCGATCCGAACAGCGCGACCGCGACACCGGCGAGCAGGGCGATCGGCAG
CTCGATCTGCGACAGCGGTG

Product: beta-carotene ketolase

Products: NA

Alternate protein names: Beta-carotene oxygenase [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MHAATAKATEFGASRRDDARQRRVGLTLAAVIIAAWLVLHVGLMFFWPLTLHSLLPALPLVVLQTWLYVGLFIIAHDCMH
GSLVPFKPQVNRRIGQLCLFLYAGFSFDALNVEHHKHHRHPGTAEDPDFDEVPPHGFWHWFASFFLHYFGWKQVAIIAAV
SLVYQLVFAVPLQNILLFWALPGLLSALQLFTFGTYLPHKPATQPFADRHNARTSEFPAWLSLLTCFHFGFHHEHHLHPD
APWWRLPEIKRRALERRD

Sequences:

>Translated_258_residues
MHAATAKATEFGASRRDDARQRRVGLTLAAVIIAAWLVLHVGLMFFWPLTLHSLLPALPLVVLQTWLYVGLFIIAHDCMH
GSLVPFKPQVNRRIGQLCLFLYAGFSFDALNVEHHKHHRHPGTAEDPDFDEVPPHGFWHWFASFFLHYFGWKQVAIIAAV
SLVYQLVFAVPLQNILLFWALPGLLSALQLFTFGTYLPHKPATQPFADRHNARTSEFPAWLSLLTCFHFGFHHEHHLHPD
APWWRLPEIKRRALERRD
>Mature_258_residues
MHAATAKATEFGASRRDDARQRRVGLTLAAVIIAAWLVLHVGLMFFWPLTLHSLLPALPLVVLQTWLYVGLFIIAHDCMH
GSLVPFKPQVNRRIGQLCLFLYAGFSFDALNVEHHKHHRHPGTAEDPDFDEVPPHGFWHWFASFFLHYFGWKQVAIIAAV
SLVYQLVFAVPLQNILLFWALPGLLSALQLFTFGTYLPHKPATQPFADRHNARTSEFPAWLSLLTCFHFGFHHEHHLHPD
APWWRLPEIKRRALERRD

Specific function: Converts beta-carotene to canthaxanthin via echinenone [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 29737; Mature: 29737

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAATAKATEFGASRRDDARQRRVGLTLAAVIIAAWLVLHVGLMFFWPLTLHSLLPALPL
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLQTWLYVGLFIIAHDCMHGSLVPFKPQVNRRIGQLCLFLYAGFSFDALNVEHHKHHRH
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC
PGTAEDPDFDEVPPHGFWHWFASFFLHYFGWKQVAIIAAVSLVYQLVFAVPLQNILLFWA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPGLLSALQLFTFGTYLPHKPATQPFADRHNARTSEFPAWLSLLTCFHFGFHHEHHLHPD
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
APWWRLPEIKRRALERRD
CCCCCCHHHHHHHHHCCC
>Mature Secondary Structure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CCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]