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The map label for this gene is etfB [H]

Identifier: 146343272

GI number: 146343272

Start: 6741783

End: 6742532

Strand: Reverse

Name: etfB [H]

Synonym: BRADO6492

Alternate gene names: 146343272

Gene position: 6742532-6741783 (Counterclockwise)

Preceding gene: 146343273

Following gene: 146343271

Centisome position: 90.42

GC content: 65.6

Gene sequence:

>750_bases
ATGAAGGTTCTGGTGCCGGTCAAGCGGGTGGTCGACTACAACGTCAAGGTCCGCGTCAAGAGCGACGGATCGGGCGTTGA
GCTCGCCAACGTCAAGATGTCGATGAATCCGTTCGACGAGATCGCCGTCGAGGAAGCGCTGCGGCTGAAGGAAGCCGGCA
AGGCGACCGAGGTCGTCGTGGTCTCGATCGGACCCGCGCAGGCCTCCGAGACCATCCGCACCGCGCTCGCAATGGGCGCG
GACCGCGGCATCCTGGTCAAGGCCGAAGGCAATGTCGAACCGCTCGCGGTGGCCAAGATCCTCAAGGCTGTGGCGCAGGA
AGAGCAGCCCGGGCTGATCATTCTCGGCAAGCAGGCGATCGACGACGACAGCAATCAGACCGGCCAGATGCTGGCCGCGC
TGCTCGGCTGGGCGCAGGCGACCTTCGCTTCCAAGCTCGAGGTCGAAGGGGCCGACTTCAAGGTCACCCGCGAGGTCGAT
GGCGGCCTGCAGACCGTGATGCTCAAGGGACCGGCGATCGTCACCACCGATCTGCGTCTCAACGAGCCGCGCTACGCGTC
GCTGCCGAACATCATGAAGGCGAAGAAGAAGCCGATCGCCGAGAAGACCGCCGCCGACACCGGCGTCGATCTCACCCCGC
GGCTCGAAGTGCTCAAGACCGCGGAGCCCGCGGGCCGCAAGGCGGGCGTCAAGGTGAAGGACGTCGCGGAGCTCGTTTCC
AAACTCAAGACCGAGGCGGGGGTGCTCTGA

Upstream 100 bases:

>100_bases
GGCGTTTTTTCGCCCCTCGCGCGTTGACCGGGGGGTACGGGCGCTTTAGGTTCCGCGCCCGAAAGATCAACCCCGGACAA
TTGAGAGCGAAAGAGGATCG

Downstream 100 bases:

>100_bases
TGGCCACGCTGCTGATTGCCGAACACGACAACGCTGGAATCAAGGACGCGACCAACAAGGCGTTGACGGCGGCCGCCGCG
CTCGGCGCCGATGTCGACGT

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKVLVPVKRVVDYNVKVRVKSDGSGVELANVKMSMNPFDEIAVEEALRLKEAGKATEVVVVSIGPAQASETIRTALAMGA
DRGILVKAEGNVEPLAVAKILKAVAQEEQPGLIILGKQAIDDDSNQTGQMLAALLGWAQATFASKLEVEGADFKVTREVD
GGLQTVMLKGPAIVTTDLRLNEPRYASLPNIMKAKKKPIAEKTAADTGVDLTPRLEVLKTAEPAGRKAGVKVKDVAELVS
KLKTEAGVL

Sequences:

>Translated_249_residues
MKVLVPVKRVVDYNVKVRVKSDGSGVELANVKMSMNPFDEIAVEEALRLKEAGKATEVVVVSIGPAQASETIRTALAMGA
DRGILVKAEGNVEPLAVAKILKAVAQEEQPGLIILGKQAIDDDSNQTGQMLAALLGWAQATFASKLEVEGADFKVTREVD
GGLQTVMLKGPAIVTTDLRLNEPRYASLPNIMKAKKKPIAEKTAADTGVDLTPRLEVLKTAEPAGRKAGVKVKDVAELVS
KLKTEAGVL
>Mature_249_residues
MKVLVPVKRVVDYNVKVRVKSDGSGVELANVKMSMNPFDEIAVEEALRLKEAGKATEVVVVSIGPAQASETIRTALAMGA
DRGILVKAEGNVEPLAVAKILKAVAQEEQPGLIILGKQAIDDDSNQTGQMLAALLGWAQATFASKLEVEGADFKVTREVD
GGLQTVMLKGPAIVTTDLRLNEPRYASLPNIMKAKKKPIAEKTAADTGVDLTPRLEVLKTAEPAGRKAGVKVKDVAELVS
KLKTEAGVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=60.7287449392713, Blast_Score=280, Evalue=6e-76,
Organism=Homo sapiens, GI62420877, Length=232, Percent_Identity=59.9137931034483, Blast_Score=257, Evalue=6e-69,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=54.9407114624506, Blast_Score=256, Evalue=9e-69,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=48.4, Blast_Score=231, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=59.7560975609756, Blast_Score=268, Evalue=3e-72,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=59.7560975609756, Blast_Score=268, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26403; Mature: 26403

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLVPVKRVVDYNVKVRVKSDGSGVELANVKMSMNPFDEIAVEEALRLKEAGKATEVVV
CCEEECCHHHHCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE
VSIGPAQASETIRTALAMGADRGILVKAEGNVEPLAVAKILKAVAQEEQPGLIILGKQAI
EEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALLGWAQATFASKLEVEGADFKVTREVDGGLQTVMLKGPAIVTTDLRL
CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCEEEEEEECCEEEEEEEEE
NEPRYASLPNIMKAKKKPIAEKTAADTGVDLTPRLEVLKTAEPAGRKAGVKVKDVAELVS
CCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH
KLKTEAGVL
HHHHHHCCC
>Mature Secondary Structure
MKVLVPVKRVVDYNVKVRVKSDGSGVELANVKMSMNPFDEIAVEEALRLKEAGKATEVVV
CCEEECCHHHHCCCEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEE
VSIGPAQASETIRTALAMGADRGILVKAEGNVEPLAVAKILKAVAQEEQPGLIILGKQAI
EEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALLGWAQATFASKLEVEGADFKVTREVDGGLQTVMLKGPAIVTTDLRL
CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCEEEEEEECCEEEEEEEEE
NEPRYASLPNIMKAKKKPIAEKTAADTGVDLTPRLEVLKTAEPAGRKAGVKVKDVAELVS
CCCCCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH
KLKTEAGVL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]