Click here to switch to the map view.

The map label for this gene is 146343273

Identifier: 146343273

GI number: 146343273

Start: 6742652

End: 6743224

Strand: Reverse

Name: 146343273

Synonym: BRADO6493

Alternate gene names: NA

Gene position: 6743224-6742652 (Counterclockwise)

Preceding gene: 146343274

Following gene: 146343272

Centisome position: 90.43

GC content: 66.14

Gene sequence:

>573_bases
ATGGTCATTTTGAATCGTATCTACACGCGGACCGGTGACGACGGCACGACGGCGCTCGGCAATGGCGAGCGCCGGCCGAA
GTTCGACCTGCGCGTCTCCGCCTATGGAACCGTCGATGAGACCAACGCCGCGATCGGCGTGGTGCGGCTGCATCTCGCCG
ACGCGCCCGAGATCGACGCGATGCTCGGCCTGATCCAGAACGATCTGTTCGACCTCGGGGCCGACCTGGCGGTGCCGCAG
CGCGAGGGCAAGGCGGAGCGGCTGCGCGTGGTGGCGAGCCAGGTGGATCGTCTGGAGCGCGACATCGACACGTTGAATGA
CAAGCTCGCGCCGCTGACCTCGTTCGTGCTCCCTGGTGGAACCCCTGCGGCGGCGCATCTGCACGTTGCCCGTACTATTT
GCCGCAGGGCGGAACGGATCATGGCGGAACTCGCTTCCCGACCGGACGAGCCGGTCAGCGAGGCTGCGATTCGTTATATG
AACCGCCTGTCGGATTTCCTGTTCGTGGCCAGCCGCGCCGCGAACCGGAACGGCGCCGGCGACGTGTTGTGGGTGCCAGG
GCAAAACCGTTAG

Upstream 100 bases:

>100_bases
CGGGTGATCCTGCAATTCGTGGCGATCGTCATTGCCATGGCGACCATCTGGGCGATGGGACGCTGAGGGCGTGCGAGAAC
GGGGACGTTGAGACAACGGC

Downstream 100 bases:

>100_bases
CCCCGGGGGCGTGCGGGGTGGCGTTTTTTCGCCCCTCGCGCGTTGACCGGGGGGTACGGGCGCTTTAGGTTCCGCGCCCG
AAAGATCAACCCCGGACAAT

Product: putative ATP:cob(I)alamin adenosyltransferase, monofunctional PduO type

Products: NA

Alternate protein names: Cob(I)alamin adenosyltransferase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MVILNRIYTRTGDDGTTALGNGERRPKFDLRVSAYGTVDETNAAIGVVRLHLADAPEIDAMLGLIQNDLFDLGADLAVPQ
REGKAERLRVVASQVDRLERDIDTLNDKLAPLTSFVLPGGTPAAAHLHVARTICRRAERIMAELASRPDEPVSEAAIRYM
NRLSDFLFVASRAANRNGAGDVLWVPGQNR

Sequences:

>Translated_190_residues
MVILNRIYTRTGDDGTTALGNGERRPKFDLRVSAYGTVDETNAAIGVVRLHLADAPEIDAMLGLIQNDLFDLGADLAVPQ
REGKAERLRVVASQVDRLERDIDTLNDKLAPLTSFVLPGGTPAAAHLHVARTICRRAERIMAELASRPDEPVSEAAIRYM
NRLSDFLFVASRAANRNGAGDVLWVPGQNR
>Mature_190_residues
MVILNRIYTRTGDDGTTALGNGERRPKFDLRVSAYGTVDETNAAIGVVRLHLADAPEIDAMLGLIQNDLFDLGADLAVPQ
REGKAERLRVVASQVDRLERDIDTLNDKLAPLTSFVLPGGTPAAAHLHVARTICRRAERIMAELASRPDEPVSEAAIRYM
NRLSDFLFVASRAANRNGAGDVLWVPGQNR

Specific function: Unknown

COG id: COG2096

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI16418349, Length=187, Percent_Identity=36.3636363636364, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115534154, Length=176, Percent_Identity=35.2272727272727, Blast_Score=93, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017858
- InterPro:   IPR002779
- InterPro:   IPR016030
- ProDom:   PD007457 [H]

Pfam domain/function: PF01923 Cob_adeno_trans [H]

EC number: =2.5.1.17 [H]

Molecular weight: Translated: 20758; Mature: 20758

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILNRIYTRTGDDGTTALGNGERRPKFDLRVSAYGTVDETNAAIGVVRLHLADAPEIDA
CEEECCHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHEEEEEEEECCCCHHHH
MLGLIQNDLFDLGADLAVPQREGKAERLRVVASQVDRLERDIDTLNDKLAPLTSFVLPGG
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPAAAHLHVARTICRRAERIMAELASRPDEPVSEAAIRYMNRLSDFLFVASRAANRNGAG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVLWVPGQNR
CEEECCCCCC
>Mature Secondary Structure
MVILNRIYTRTGDDGTTALGNGERRPKFDLRVSAYGTVDETNAAIGVVRLHLADAPEIDA
CEEECCHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHEEEEEEEECCCCHHHH
MLGLIQNDLFDLGADLAVPQREGKAERLRVVASQVDRLERDIDTLNDKLAPLTSFVLPGG
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPAAAHLHVARTICRRAERIMAELASRPDEPVSEAAIRYMNRLSDFLFVASRAANRNGAG
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DVLWVPGQNR
CEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]