| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343245
Identifier: 146343245
GI number: 146343245
Start: 6718350
End: 6719534
Strand: Reverse
Name: 146343245
Synonym: BRADO6465
Alternate gene names: NA
Gene position: 6719534-6718350 (Counterclockwise)
Preceding gene: 146343247
Following gene: 146343241
Centisome position: 90.12
GC content: 65.99
Gene sequence:
>1185_bases ATGTCTCGTTTGCCACAAGCGCGCCGCAGGCGCCCGCTCTGGGGGCTTCTCGTCGCTCCCGTCCTGCTCCTGATCGCCGC CGTCGCGTGGAGCGCGTTCTGGTTCTTCGCTGCTTCGCAGGTCGATGTCCAGGCCGACGCCTGGCGCGCCCGCGAGGCGA AGGCGGGCCGTGTTTATGATTGTGCGAAGCGTACTGTCGCGGGCTTCCCGTTCCGCCTCGAGGTGCGTTGTTCTGATCCG ACCGTCGCGCTGTTCTCGCAAGCCGCGGGCACGCCGTTGATGAACGCCAAGCTCGACGAGATCCTGGTCGTCGCGCAGGT GTGGGATCCGAAGCGGATCATTGCGGAGTTCAAGGGGCCGGCCACGATCACTGAAGGTCGCGATCCAGCGTCGTTCGCCG TCAATTGGAGTGTGGGACAAGCCAGCGTGCGAGGTCTTCCGGGACCGCCGCAGCGTGCTGACCTCGTCTTTGAGCAGCCG ACGATCGATCGCATCGAGGGCAGCGCCGCCGTGCCCGCCGCGCGCGCCGATCATGCGGAGCTGCATGGCCGCATCGCCGA GGGCACGCCGTCGGATCATCCGGTGTTGGAGACGGCGTTGCAGATTGCGAACGGCAGCATTCAGAACAGTCATCCATTGC TCGCGGAGCCGTTCAGTTCCGACATCCAGGCCCGGGTGACCGGGCTGAAGGATTTCCGCCCCAAACCCTGGCCGGAGCGG TTTCGCGAGATCCAGGCAGCGGGCGGTCATGTGGAGATCGTCCAGGCGCGCATCCAGCAGGGCGAGCTTCTGGCCATGGC GGCCGGCACGCTCAGCTTGACCGCAAATGGCAATATGGATGGCGAGGTGCAGATGACGGTCGCCGGGATGGAAAAGATCA TCCCGGCGCTCGGGCTCGACAAGATGCTCGAGAACGGTGTGCCGCAGGGGACGCTCGATCGTGTGGCGCCCGGGGTGAAG TCGCAAGACGTCAGCAATCTGCTCGGGGCGCTCGACCGCGCCATTCCCGGCCTCGGCAAGGTGGTCAAGCAGAACGCCAA TGTCGGCGTCGCGCTCGGCATCAATGCGCTCGGCAAGGAGGCGACGCTTGAGGGACGCAAGGCGCGAACGTTTCCCTTGC GCTTCTCCGATGGTGCCGTGGTGCTCGGTCCGTTCAAGGTCGCCCGCGTCCCTCCGCTGTTCTGA
Upstream 100 bases:
>100_bases TGACAGCGGAAGCCTAAGTGTGGTGCTCGCGAATTGTTAATTTATGTACACAATCCGTGATCGTGGAATCGCCAAAATTG CTGGCCAAAGGGTGTCCTGC
Downstream 100 bases:
>100_bases ACTCAGGGCTTCTTGAGCTGCGGCAGCGGCCGGCCGAAATCCGGCGCTGCCGAATCCTGGCCGATGTCGACGATGCCGCG GCGGATCGCGCGCGTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSRLPQARRRRPLWGLLVAPVLLLIAAVAWSAFWFFAASQVDVQADAWRAREAKAGRVYDCAKRTVAGFPFRLEVRCSDP TVALFSQAAGTPLMNAKLDEILVVAQVWDPKRIIAEFKGPATITEGRDPASFAVNWSVGQASVRGLPGPPQRADLVFEQP TIDRIEGSAAVPAARADHAELHGRIAEGTPSDHPVLETALQIANGSIQNSHPLLAEPFSSDIQARVTGLKDFRPKPWPER FREIQAAGGHVEIVQARIQQGELLAMAAGTLSLTANGNMDGEVQMTVAGMEKIIPALGLDKMLENGVPQGTLDRVAPGVK SQDVSNLLGALDRAIPGLGKVVKQNANVGVALGINALGKEATLEGRKARTFPLRFSDGAVVLGPFKVARVPPLF
Sequences:
>Translated_394_residues MSRLPQARRRRPLWGLLVAPVLLLIAAVAWSAFWFFAASQVDVQADAWRAREAKAGRVYDCAKRTVAGFPFRLEVRCSDP TVALFSQAAGTPLMNAKLDEILVVAQVWDPKRIIAEFKGPATITEGRDPASFAVNWSVGQASVRGLPGPPQRADLVFEQP TIDRIEGSAAVPAARADHAELHGRIAEGTPSDHPVLETALQIANGSIQNSHPLLAEPFSSDIQARVTGLKDFRPKPWPER FREIQAAGGHVEIVQARIQQGELLAMAAGTLSLTANGNMDGEVQMTVAGMEKIIPALGLDKMLENGVPQGTLDRVAPGVK SQDVSNLLGALDRAIPGLGKVVKQNANVGVALGINALGKEATLEGRKARTFPLRFSDGAVVLGPFKVARVPPLF >Mature_393_residues SRLPQARRRRPLWGLLVAPVLLLIAAVAWSAFWFFAASQVDVQADAWRAREAKAGRVYDCAKRTVAGFPFRLEVRCSDPT VALFSQAAGTPLMNAKLDEILVVAQVWDPKRIIAEFKGPATITEGRDPASFAVNWSVGQASVRGLPGPPQRADLVFEQPT IDRIEGSAAVPAARADHAELHGRIAEGTPSDHPVLETALQIANGSIQNSHPLLAEPFSSDIQARVTGLKDFRPKPWPERF REIQAAGGHVEIVQARIQQGELLAMAAGTLSLTANGNMDGEVQMTVAGMEKIIPALGLDKMLENGVPQGTLDRVAPGVKS QDVSNLLGALDRAIPGLGKVVKQNANVGVALGINALGKEATLEGRKARTFPLRFSDGAVVLGPFKVARVPPLF
Specific function: Unknown
COG id: COG4093
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42188; Mature: 42057
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLPQARRRRPLWGLLVAPVLLLIAAVAWSAFWFFAASQVDVQADAWRAREAKAGRVYD CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCHHH CAKRTVAGFPFRLEVRCSDPTVALFSQAAGTPLMNAKLDEILVVAQVWDPKRIIAEFKGP HHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCC ATITEGRDPASFAVNWSVGQASVRGLPGPPQRADLVFEQPTIDRIEGSAAVPAARADHAE EEECCCCCCCEEEEEEECCCHHCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHH LHGRIAEGTPSDHPVLETALQIANGSIQNSHPLLAEPFSSDIQARVTGLKDFRPKPWPER HCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHCHHHCCCCCCHHH FREIQAAGGHVEIVQARIQQGELLAMAAGTLSLTANGNMDGEVQMTVAGMEKIIPALGLD HHHHHHCCCEEEEHHHHHCCCCEEEEECCEEEEEECCCCCCEEEEEEHHHHHHHHHCCHH KMLENGVPQGTLDRVAPGVKSQDVSNLLGALDRAIPGLGKVVKQNANVGVALGINALGKE HHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCCC ATLEGRKARTFPLRFSDGAVVLGPFKVARVPPLF CCCCCCCCEEEEEEECCCEEEECCEECCCCCCCC >Mature Secondary Structure SRLPQARRRRPLWGLLVAPVLLLIAAVAWSAFWFFAASQVDVQADAWRAREAKAGRVYD CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCCCCHHH CAKRTVAGFPFRLEVRCSDPTVALFSQAAGTPLMNAKLDEILVVAQVWDPKRIIAEFKGP HHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCC ATITEGRDPASFAVNWSVGQASVRGLPGPPQRADLVFEQPTIDRIEGSAAVPAARADHAE EEECCCCCCCEEEEEEECCCHHCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHH LHGRIAEGTPSDHPVLETALQIANGSIQNSHPLLAEPFSSDIQARVTGLKDFRPKPWPER HCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHHHCHHHCCCCCCHHH FREIQAAGGHVEIVQARIQQGELLAMAAGTLSLTANGNMDGEVQMTVAGMEKIIPALGLD HHHHHHCCCEEEEHHHHHCCCCEEEEECCEEEEEECCCCCCEEEEEEHHHHHHHHHCCHH KMLENGVPQGTLDRVAPGVKSQDVSNLLGALDRAIPGLGKVVKQNANVGVALGINALGKE HHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCCC ATLEGRKARTFPLRFSDGAVVLGPFKVARVPPLF CCCCCCCCEEEEEEECCCEEEECCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA