Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is ectD [H]
Identifier: 146343222
GI number: 146343222
Start: 6684912
End: 6685712
Strand: Direct
Name: ectD [H]
Synonym: BRADO6432
Alternate gene names: 146343222
Gene position: 6684912-6685712 (Clockwise)
Preceding gene: 146343221
Following gene: 146343223
Centisome position: 89.65
GC content: 65.42
Gene sequence:
>801_bases ATGAAGCTGACGCCGGAGCAGATCGCATTCTTCAACCGCGAGGGCTGGCTGTTCCTGCCGGAACTGTTCAGCCCGGAGGA GACCGCCTTCCTCGCCCGCGAGGCGGAGGCGATCTACGCCGCCGACAGGCCCGAGGTCTGGCGCGAGAAGAGCGGCGTAC CGCGCACGGCGTTTGCCGCGCATCTGTACAATGACGCGTTCCGCGTGCTCGCGGCGCATCCGCGCATGATCGAGCCGATC GAGCAGATCTTCGGCGAGAAGCTCTACATGCATCAGTTCAAGATCAACGCCAAATCCGCCTTCACCGGCGACGTCTGGCA GTGGCACCAGGACTACGGCACCTGGAAGCGCGACGACGGCATGCCGGAGCCGCGCGCGATGAACATCGCGATCTTCCTCG ACGAGGTGATGCCGATCAACGGCCCGTTGATGCTGGTGCCACGCAGCCAGCACGAAGGCGATCTCGAGGCCTCACACGAT CTGGCCACGACGTCCTATCCGTTGTGGACGCTCGACGAGGCGACGGTGACGCGGCTGGTCGCCCAAGGCGGCATTGTGGC GCCGACCGGCAAGCGCGGCGGCATGCTGATGTTCCACGGCAATCTCGTGCACGGCTCCGCCGGCAACATCACGCCCTACC CGCGTAAGATCGTGTACCTGACGCTGAACGCGGTCTCGAACCACATTCGCACCCCGACGAGGCCGGAGTACATCGCGCAT CGCGACTTCACGCCGATCGAGACGTTGCCGGACGATGCATTGCTGCAGCTGGCGCGGGCGCATCGCGAGGCGGCGGAGTA A
Upstream 100 bases:
>100_bases CGCATGCTGATCGAGCAGGGCAAGAAGATGTAGCTTCGCGTCGGACGCAGCCCGGCGAAGACCGGGCGCCTCCAAGAGGA AACGAGCAAGAGAGGCCACC
Downstream 100 bases:
>100_bases GGCACAGCGCTCGCCACAAAAGAGGTCGTCATGCCCCGGGCTCGACCAGGCTCGACCCGGGCATCCATCCTCTGAGCAAG AGCGAGCCTTGTGAGGAGAT
Product: putative ectoine hydroxylase (ectD)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAAHLYNDAFRVLAAHPRMIEPI EQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDGMPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHD LATTSYPLWTLDEATVTRLVAQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH RDFTPIETLPDDALLQLARAHREAAE
Sequences:
>Translated_266_residues MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAAHLYNDAFRVLAAHPRMIEPI EQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDGMPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHD LATTSYPLWTLDEATVTRLVAQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH RDFTPIETLPDDALLQLARAHREAAE >Mature_266_residues MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAAHLYNDAFRVLAAHPRMIEPI EQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDGMPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHD LATTSYPLWTLDEATVTRLVAQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH RDFTPIETLPDDALLQLARAHREAAE
Specific function: Catalyzes the conversion of ectoine to hydroxyectoine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PhyH family. EctD subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012774 - InterPro: IPR008775 [H]
Pfam domain/function: PF05721 PhyH [H]
EC number: NA
Molecular weight: Translated: 30146; Mature: 30146
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAA CCCCHHHHHEECCCCCEECCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHCCCCHHHHHH HLYNDAFRVLAAHPRMIEPIEQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDG HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCC MPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHDLATTSYPLWTLDEATVTRLV CCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHH AQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH HCCCEECCCCCCCCEEEEECCEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEC RDFTPIETLPDDALLQLARAHREAAE CCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAA CCCCHHHHHEECCCCCEECCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHCCCCHHHHHH HLYNDAFRVLAAHPRMIEPIEQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDG HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCC MPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHDLATTSYPLWTLDEATVTRLV CCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHH AQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH HCCCEECCCCCCCCEEEEECCEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEC RDFTPIETLPDDALLQLARAHREAAE CCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA