| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343169
Identifier: 146343169
GI number: 146343169
Start: 6628744
End: 6630276
Strand: Reverse
Name: 146343169
Synonym: BRADO6367
Alternate gene names: NA
Gene position: 6630276-6628744 (Counterclockwise)
Preceding gene: 146343176
Following gene: 146343161
Centisome position: 88.92
GC content: 60.53
Gene sequence:
>1533_bases ATGACCCTGCACCTGGCTGAAGAACACGCGGGCCTTCGAACGCTCCGGGCCGTCGCATATCCACAAATGTCGTGCTGGAT ATTGGTCATCGTCGTTTTCGGCACGGGCATCATCCTCCGCCATCTCACGGCAGGTAATAGCGATGTGAGCTGGCTGCTGA TCGCCGGTGAACGCTGGCTCGACGGTCAGCGCCTCTATTCGGAAATACTGGAGACCAACCCGCCGATGGCGGTTTTGGTC TATGTGCCTGCTCTCCTCATCGCTCGCCAGCTGGGTCTCTCGCCGGAGATCGTTCTCGACAGTCTGGTGTTCTTCGCAAT CGCGGCCTCGCTCGCTGCCAGTCTACTGATCCTGCGCCCGTCGATCGAGCTATCCCGCTATCAGGCATGGGGGCTGGCGA TCGCAGCGATCATGGCACTCGCCTTGTTGCCGCTGCAGTCCTTCGGGCAGCGCGAGCATATCGCCGTGATCGAGCTGATG CCGTTCATCGCACTCCTGGCCGTGCGGCTCCATCGTGAGTTGCCGCCCCGATGGGCGACCTGGGTTGCCGGTGCCGGTCT TGGCTTGGCCCTGTGCTTCAAGCCTCACTTCGCTTTGGTCGCTGCTGGTGGCGTGGGTTTCGTTGCAGCTTACCTGAGAT CCCCGCGTACGCTGCTGTCACCCGAGAACCTCGTGGCAGCTGCCGTCGTGTCAATCTATGGCGTCTGCACCGTACTGCTC TTCCCCGAATACATCACGGACATGCTGCCGCTGGTCCGCGATGTGTATTCGATCGGATTGCCGCTCAGCCTGATGCTGAT GAAACCGGCACCTGCGCTCTGGGGCCTGATCCTGACTTTGACACTCGTCCGGAAGCGCGGCCGGGAGCTCGATCCCGTGC TTCTGCTGCTGATCACGACATCGGTCGCCTTTTTCGTCGTCTACCTCCTGCAGCGTAAAGGCTGGCCCTACCATTCTTAC CCGATGCTCGCCTTTGCCTGGCTGAGTCTTGGCTTTGCCATGAGCTCGCCGGCTGCGGCCTCGTTGGTCTCGCCCTTGGG ATTCGCGAGAGGCATCCTGGCGATGGCGCTCGTTGTACCGACGGTCTCCTGGTTCAATCACGCACTCGATGCCAGCTTCC TGCAACCGGCCATCGCCAGGATCGGAATCGAACACCCGACAGTGCTGGCCATCTCCGGCAATGGCGGTCTCGCCCACCCC CTCACTCGAAGAGTTGGCGGCATCTGGGCCTCTCGCCAGCAGAGCTTGCTGGTTGCGAGCTATGAGGACTATGCACGCGA AAGCGGCATGTTCAGTTCGCAGTCGCTTACGATCGTCGATGATTACGCGCAGCGGGAACGAAGATGGATGATCGAGGACT TTCGACGGGTGCGTCCCGACATCGTGCTCGTCGACAATATGACAGGTCCGTGGAGAAAATGGCTGCATGAAAGTCCCGAA CTCGACGCGCTGCTGATGGATTATCGCCTGACGGAGACGATCCGGGACGTCGAAGTCTATGTCAGGCAAGTCAAGATCGA TCCGCATGAGTAG
Upstream 100 bases:
>100_bases ATCGTCAGCTGCCCGCGTAAACCAGAGATTGTCACGGACATCATAAGCAATCTGTTAATGGTGTCCAGGTAAGGTCCCGT AGATTTACGGGATAGCATCA
Downstream 100 bases:
>100_bases TTTGGAGACATCCGCGCTGCGGGTCGACCGTCGGCTCCGTCTCTGGTGACGCCATCTGCTGAGTCGGAAGGACCGCCGAA GTCAGCTTCGATGCTGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MTLHLAEEHAGLRTLRAVAYPQMSCWILVIVVFGTGIILRHLTAGNSDVSWLLIAGERWLDGQRLYSEILETNPPMAVLV YVPALLIARQLGLSPEIVLDSLVFFAIAASLAASLLILRPSIELSRYQAWGLAIAAIMALALLPLQSFGQREHIAVIELM PFIALLAVRLHRELPPRWATWVAGAGLGLALCFKPHFALVAAGGVGFVAAYLRSPRTLLSPENLVAAAVVSIYGVCTVLL FPEYITDMLPLVRDVYSIGLPLSLMLMKPAPALWGLILTLTLVRKRGRELDPVLLLLITTSVAFFVVYLLQRKGWPYHSY PMLAFAWLSLGFAMSSPAAASLVSPLGFARGILAMALVVPTVSWFNHALDASFLQPAIARIGIEHPTVLAISGNGGLAHP LTRRVGGIWASRQQSLLVASYEDYARESGMFSSQSLTIVDDYAQRERRWMIEDFRRVRPDIVLVDNMTGPWRKWLHESPE LDALLMDYRLTETIRDVEVYVRQVKIDPHE
Sequences:
>Translated_510_residues MTLHLAEEHAGLRTLRAVAYPQMSCWILVIVVFGTGIILRHLTAGNSDVSWLLIAGERWLDGQRLYSEILETNPPMAVLV YVPALLIARQLGLSPEIVLDSLVFFAIAASLAASLLILRPSIELSRYQAWGLAIAAIMALALLPLQSFGQREHIAVIELM PFIALLAVRLHRELPPRWATWVAGAGLGLALCFKPHFALVAAGGVGFVAAYLRSPRTLLSPENLVAAAVVSIYGVCTVLL FPEYITDMLPLVRDVYSIGLPLSLMLMKPAPALWGLILTLTLVRKRGRELDPVLLLLITTSVAFFVVYLLQRKGWPYHSY PMLAFAWLSLGFAMSSPAAASLVSPLGFARGILAMALVVPTVSWFNHALDASFLQPAIARIGIEHPTVLAISGNGGLAHP LTRRVGGIWASRQQSLLVASYEDYARESGMFSSQSLTIVDDYAQRERRWMIEDFRRVRPDIVLVDNMTGPWRKWLHESPE LDALLMDYRLTETIRDVEVYVRQVKIDPHE >Mature_509_residues TLHLAEEHAGLRTLRAVAYPQMSCWILVIVVFGTGIILRHLTAGNSDVSWLLIAGERWLDGQRLYSEILETNPPMAVLVY VPALLIARQLGLSPEIVLDSLVFFAIAASLAASLLILRPSIELSRYQAWGLAIAAIMALALLPLQSFGQREHIAVIELMP FIALLAVRLHRELPPRWATWVAGAGLGLALCFKPHFALVAAGGVGFVAAYLRSPRTLLSPENLVAAAVVSIYGVCTVLLF PEYITDMLPLVRDVYSIGLPLSLMLMKPAPALWGLILTLTLVRKRGRELDPVLLLLITTSVAFFVVYLLQRKGWPYHSYP MLAFAWLSLGFAMSSPAAASLVSPLGFARGILAMALVVPTVSWFNHALDASFLQPAIARIGIEHPTVLAISGNGGLAHPL TRRVGGIWASRQQSLLVASYEDYARESGMFSSQSLTIVDDYAQRERRWMIEDFRRVRPDIVLVDNMTGPWRKWLHESPEL DALLMDYRLTETIRDVEVYVRQVKIDPHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56481; Mature: 56350
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLHLAEEHAGLRTLRAVAYPQMSCWILVIVVFGTGIILRHLTAGNSDVSWLLIAGERWL CEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC DGQRLYSEILETNPPMAVLVYVPALLIARQLGLSPEIVLDSLVFFAIAASLAASLLILRP CHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SIELSRYQAWGLAIAAIMALALLPLQSFGQREHIAVIELMPFIALLAVRLHRELPPRWAT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH WVAGAGLGLALCFKPHFALVAAGGVGFVAAYLRSPRTLLSPENLVAAAVVSIYGVCTVLL HHHCCCCCHHHHCCCCEEEEECCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH FPEYITDMLPLVRDVYSIGLPLSLMLMKPAPALWGLILTLTLVRKRGRELDPVLLLLITT HHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SVAFFVVYLLQRKGWPYHSYPMLAFAWLSLGFAMSSPAAASLVSPLGFARGILAMALVVP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TVSWFNHALDASFLQPAIARIGIEHPTVLAISGNGGLAHPLTRRVGGIWASRQQSLLVAS HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCHHHCCCCCEEEEC YEDYARESGMFSSQSLTIVDDYAQRERRWMIEDFRRVRPDIVLVDNMTGPWRKWLHESPE HHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCC LDALLMDYRLTETIRDVEVYVRQVKIDPHE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TLHLAEEHAGLRTLRAVAYPQMSCWILVIVVFGTGIILRHLTAGNSDVSWLLIAGERWL EEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC DGQRLYSEILETNPPMAVLVYVPALLIARQLGLSPEIVLDSLVFFAIAASLAASLLILRP CHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC SIELSRYQAWGLAIAAIMALALLPLQSFGQREHIAVIELMPFIALLAVRLHRELPPRWAT CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH WVAGAGLGLALCFKPHFALVAAGGVGFVAAYLRSPRTLLSPENLVAAAVVSIYGVCTVLL HHHCCCCCHHHHCCCCEEEEECCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHH FPEYITDMLPLVRDVYSIGLPLSLMLMKPAPALWGLILTLTLVRKRGRELDPVLLLLITT HHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SVAFFVVYLLQRKGWPYHSYPMLAFAWLSLGFAMSSPAAASLVSPLGFARGILAMALVVP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH TVSWFNHALDASFLQPAIARIGIEHPTVLAISGNGGLAHPLTRRVGGIWASRQQSLLVAS HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCHHHCCCCCEEEEC YEDYARESGMFSSQSLTIVDDYAQRERRWMIEDFRRVRPDIVLVDNMTGPWRKWLHESPE HHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCC LDALLMDYRLTETIRDVEVYVRQVKIDPHE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA