Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343166
Identifier: 146343166
GI number: 146343166
Start: 6625333
End: 6626799
Strand: Direct
Name: 146343166
Synonym: BRADO6364
Alternate gene names: NA
Gene position: 6625333-6626799 (Clockwise)
Preceding gene: 146343165
Following gene: 146343167
Centisome position: 88.85
GC content: 64.83
Gene sequence:
>1467_bases ATGTGGCGCTGGGTGAAGACAGCTCCCTGGCTGTTCGTTGCGATTGCAATGGCTGCTCCGGCCACGAGCCGGGCGGAGGG ACCCGGTGCCATTGTCGCGCGGTTTCCGGCAGCCCATTTCGAGACCACGACGCCGGAGGATGCGGGCTGGTCCGTCGATC AGCTTACGGCGGCCAAGGCGTGGTCGTTGAAGATCGCGCCGACCGCCGCCGTGATGATCATCCAGCATGGCCGCATCGTC GCCGAATGGGGCGATATCGCCACCAAGAGCAATCTGCATTCGGCGCGCAAGAGCCTGCTCAGCGCGCTGATCGGTATCGC CGTCAGCGACCACCGGATCGACCTCAATGCGACGTTGGCGACCCTCGGCATCGACGACAACTCGCCTGGCCTGAGCGAGG AGGAGAAGTCAGCCACGGTCGCGGACCTGATCAAGGCACGTTCCGGCGTCTATCACGCGGCGCTTTACGAGACGCCGGGC ATGGCACGGCGGCGGCCACCGCGCTTCAGCCATGCGCCGGGCACCTTCTGGTACTACAATAATTGGGACTTCAATGCGCT CGGCACGATCTACGAGAAGGCCACCGCGCAGTCGATCTTCGATGCGTTCAACCTGCAGATCGCGCGCCCCATCGGGATGC AGGACTATCAGCCCAGCGACGGCAGCTACGTTCGCGGCGCCGCATCCAACCATGCGGCCTATCCGATCCGGATGAGCGCG CGTGATCTGGCCCGTTTTGCGCTGCTCTATCTGCATGACGGCAGATGGGGGGACCGCCAGGTCATTCCCGCGGCCTGGGT GCGTGAGAGCACGCGCGCCTATTCGGACGCGTATACGGAGTTCGCGCGCGGCCTCGGATACGGTTATCTGTGGTGGGTCG GATTTCCGCATCACCTCTCCGGCGCTCCGGCGGTCCAGGTGCCGGCCGGCACCTACGCGGCGATGGGCGCTGAAGGGCAA TATGCCTTCGTCATCCCGAGCCTCGATCTCGTCATCGTGCACCGGATCAACAGCGATCCCGCGCTCGAACCGGTCGGGCC GCGCAAGCGGGAGCCGACGTTCCGACAAATCGCCCGGTTGCTTTGGCTGATCCTTTCGGCGGCCGGCGACCGAGACGTCG GTCCGGACGCCAGCATCGCGCGCGCCGATGGGGCACGACCAGATGTTTCCGGGCTGAAGACGGCGATGTCCGGCAAGAGC CTGCGTACAGGCTCATCCTTGAAAGATGGCGCTTATGCCTGGGAGCTCCATGCCGACGGCACATTGTCCATGGTCACCGG CGCCGACCGTCATGAGCGCTGGCATGGCAATTGGAGAGTCGACGATGGGGCCCGGTTCTGTCGTTCCCTCGATGATGGCG ACGCGCAACTCGCCCGCGAGCGTTGTTACGACGTCGTGCTCAAGGATGCCGCAGTCCAGTTGTTCGGCCCCGATGGGCTG ATGGAATTCGATATGCGGGTGGAGTAG
Upstream 100 bases:
>100_bases CCGGTCCGGCTGCCGGTCATTCGATCGGCTTGCGATTTCAGGTCTCCCGAACAAGCCGCGATTGCGGTAATGAGGTAGCA TCACTGTCAGGGGGGATTCG
Downstream 100 bases:
>100_bases ATCGCCGCGTCACCAACCAAACCAGAACGCGCAGGCATTCCGGTTTGGATCTCCGGAGCGATCGGCCGGTGAGTCGTAAC CCCGATACCGACATTGTCTG
Product: putative beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Class C; Amide Hydrolase; Beta-Lactamase Family Protein; Hydrolase Transmembrane Protein; Beta-Lactamase Class C Family Protein; Beta-Lactamase Class C Protein; Membrane Or Secreted Beta-Lactamase Family Protein; Secreted Beta-Lactamase Family Protein; Beta-Lactamase Class C-Like Protein; Hydrolase; Beta-Lactamase-Like Hydrolase
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MWRWVKTAPWLFVAIAMAAPATSRAEGPGAIVARFPAAHFETTTPEDAGWSVDQLTAAKAWSLKIAPTAAVMIIQHGRIV AEWGDIATKSNLHSARKSLLSALIGIAVSDHRIDLNATLATLGIDDNSPGLSEEEKSATVADLIKARSGVYHAALYETPG MARRRPPRFSHAPGTFWYYNNWDFNALGTIYEKATAQSIFDAFNLQIARPIGMQDYQPSDGSYVRGAASNHAAYPIRMSA RDLARFALLYLHDGRWGDRQVIPAAWVRESTRAYSDAYTEFARGLGYGYLWWVGFPHHLSGAPAVQVPAGTYAAMGAEGQ YAFVIPSLDLVIVHRINSDPALEPVGPRKREPTFRQIARLLWLILSAAGDRDVGPDASIARADGARPDVSGLKTAMSGKS LRTGSSLKDGAYAWELHADGTLSMVTGADRHERWHGNWRVDDGARFCRSLDDGDAQLARERCYDVVLKDAAVQLFGPDGL MEFDMRVE
Sequences:
>Translated_488_residues MWRWVKTAPWLFVAIAMAAPATSRAEGPGAIVARFPAAHFETTTPEDAGWSVDQLTAAKAWSLKIAPTAAVMIIQHGRIV AEWGDIATKSNLHSARKSLLSALIGIAVSDHRIDLNATLATLGIDDNSPGLSEEEKSATVADLIKARSGVYHAALYETPG MARRRPPRFSHAPGTFWYYNNWDFNALGTIYEKATAQSIFDAFNLQIARPIGMQDYQPSDGSYVRGAASNHAAYPIRMSA RDLARFALLYLHDGRWGDRQVIPAAWVRESTRAYSDAYTEFARGLGYGYLWWVGFPHHLSGAPAVQVPAGTYAAMGAEGQ YAFVIPSLDLVIVHRINSDPALEPVGPRKREPTFRQIARLLWLILSAAGDRDVGPDASIARADGARPDVSGLKTAMSGKS LRTGSSLKDGAYAWELHADGTLSMVTGADRHERWHGNWRVDDGARFCRSLDDGDAQLARERCYDVVLKDAAVQLFGPDGL MEFDMRVE >Mature_488_residues MWRWVKTAPWLFVAIAMAAPATSRAEGPGAIVARFPAAHFETTTPEDAGWSVDQLTAAKAWSLKIAPTAAVMIIQHGRIV AEWGDIATKSNLHSARKSLLSALIGIAVSDHRIDLNATLATLGIDDNSPGLSEEEKSATVADLIKARSGVYHAALYETPG MARRRPPRFSHAPGTFWYYNNWDFNALGTIYEKATAQSIFDAFNLQIARPIGMQDYQPSDGSYVRGAASNHAAYPIRMSA RDLARFALLYLHDGRWGDRQVIPAAWVRESTRAYSDAYTEFARGLGYGYLWWVGFPHHLSGAPAVQVPAGTYAAMGAEGQ YAFVIPSLDLVIVHRINSDPALEPVGPRKREPTFRQIARLLWLILSAAGDRDVGPDASIARADGARPDVSGLKTAMSGKS LRTGSSLKDGAYAWELHADGTLSMVTGADRHERWHGNWRVDDGARFCRSLDDGDAQLARERCYDVVLKDAAVQLFGPDGL MEFDMRVE
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53442; Mature: 53442
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRWVKTAPWLFVAIAMAAPATSRAEGPGAIVARFPAAHFETTTPEDAGWSVDQLTAAKA CCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCE WSLKIAPTAAVMIIQHGRIVAEWGDIATKSNLHSARKSLLSALIGIAVSDHRIDLNATLA EEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEE TLGIDDNSPGLSEEEKSATVADLIKARSGVYHAALYETPGMARRRPPRFSHAPGTFWYYN EEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEC NWDFNALGTIYEKATAQSIFDAFNLQIARPIGMQDYQPSDGSYVRGAASNHAAYPIRMSA CCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECH RDLARFALLYLHDGRWGDRQVIPAAWVRESTRAYSDAYTEFARGLGYGYLWWVGFPHHLS HHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCC GAPAVQVPAGTYAAMGAEGQYAFVIPSLDLVIVHRINSDPALEPVGPRKREPTFRQIARL CCCEEEECCCCCEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH LWLILSAAGDRDVGPDASIARADGARPDVSGLKTAMSGKSLRTGSSLKDGAYAWELHADG HHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC TLSMVTGADRHERWHGNWRVDDGARFCRSLDDGDAQLARERCYDVVLKDAAVQLFGPDGL EEEEEECCCHHHCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCC MEFDMRVE EECCEECC >Mature Secondary Structure MWRWVKTAPWLFVAIAMAAPATSRAEGPGAIVARFPAAHFETTTPEDAGWSVDQLTAAKA CCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHCCE WSLKIAPTAAVMIIQHGRIVAEWGDIATKSNLHSARKSLLSALIGIAVSDHRIDLNATLA EEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEE TLGIDDNSPGLSEEEKSATVADLIKARSGVYHAALYETPGMARRRPPRFSHAPGTFWYYN EEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEC NWDFNALGTIYEKATAQSIFDAFNLQIARPIGMQDYQPSDGSYVRGAASNHAAYPIRMSA CCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECH RDLARFALLYLHDGRWGDRQVIPAAWVRESTRAYSDAYTEFARGLGYGYLWWVGFPHHLS HHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHCC GAPAVQVPAGTYAAMGAEGQYAFVIPSLDLVIVHRINSDPALEPVGPRKREPTFRQIARL CCCEEEECCCCCEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH LWLILSAAGDRDVGPDASIARADGARPDVSGLKTAMSGKSLRTGSSLKDGAYAWELHADG HHHHHHCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC TLSMVTGADRHERWHGNWRVDDGARFCRSLDDGDAQLARERCYDVVLKDAAVQLFGPDGL EEEEEECCCHHHCCCCCEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCC MEFDMRVE EECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA