Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is fabI [H]
Identifier: 146343165
GI number: 146343165
Start: 6624363
End: 6625184
Strand: Direct
Name: fabI [H]
Synonym: BRADO6363
Alternate gene names: 146343165
Gene position: 6624363-6625184 (Clockwise)
Preceding gene: 146343164
Following gene: 146343166
Centisome position: 88.84
GC content: 67.76
Gene sequence:
>822_bases ATGTCCGAGAGCGCTCACGATCCGCTGCCGACCGTCTGGAATCCGGACGACCGCATCGGCGACATGCTGAAGGGCCTGCG CGGCCTCGTGGTCGGCGTCGCCAATGAGAGCTCGATCGCCTTCGGCTGCGCGGCCAAGCTGCGCGCCTTCGGCGCCGAGG TGGCGCTCACCTATGCCGATGAGCGCACCCGCGATTTCGTCGCGCCGCTCGCCGCGCAGATCGGCGCCAGCCTGCTGCTG CCGCTCAATGTCGAGCAGCCGGGCGAGCTCGATGCCGTGTTCGCGCGCCTCAGACAGGACTGGGGCCGGCTCGATTTCGT CGTCCACTCCATCGCCTTCGCGCCGAAGGACGACTTGCACGGCCGCGTCATCGACTGCTCGGCCGACGGCTTTACCCGCG CGATGCGCATCTCGGTCTATTCCTTCCTGGAGCTCTCGCGCGCCGCGGAGCAGCTGATGACCCAGGGCGGCACGCTGCTG ACGATGAGCTATTACGGCGCCGACAAGGTCGTGAACAACTACAATATCATGGGCCTCGCAAAGGCGTCGCTCGAAGCGTC CGTGCGCTATCTCGCGGCGGAGCTCGGCGGCAAGAACATCCGCGTCTATGCCGTGTCGCCCGGGCCGCTGAAGACCCGCG CCGCCAGCGGCATCGCGCATTTCGACGAACTGGTCGAAGCCGCCGTCAACCGCAGTCCGGGACGACGCCTGGTCGACATC GCCGAGATCGGCCGTGTCGTCGCGTTCCTGGTCGGCGGCGGCGCCTCCGGCATGACCGGCGACACGATCTATGTCGATGC CGGGCTGCACAACATGGCGTGA
Upstream 100 bases:
>100_bases CGAGGCGCTCGGCTTGCCGCCGCTGGCGTTGGCCGCGGTGTCGGCCGATCCGCTCAAGGAGAACGGCGCGATCCGCGACG TCGCCTGACGGAAGAGGACG
Downstream 100 bases:
>100_bases GAAAGTCGCTCGGACGGAACGCCGCGCGACCGTCTCCAACCGATCTCTCCGGTCCGGCTGCCGGTCATTCGATCGGCTTG CGATTTCAGGTCTCCCGAAC
Product: enoyl-[acyl-carrier-protein] reductase (NADH)
Products: NA
Alternate protein names: NADH-dependent enoyl-ACP reductase 1 [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSESAHDPLPTVWNPDDRIGDMLKGLRGLVVGVANESSIAFGCAAKLRAFGAEVALTYADERTRDFVAPLAAQIGASLLL PLNVEQPGELDAVFARLRQDWGRLDFVVHSIAFAPKDDLHGRVIDCSADGFTRAMRISVYSFLELSRAAEQLMTQGGTLL TMSYYGADKVVNNYNIMGLAKASLEASVRYLAAELGGKNIRVYAVSPGPLKTRAASGIAHFDELVEAAVNRSPGRRLVDI AEIGRVVAFLVGGGASGMTGDTIYVDAGLHNMA
Sequences:
>Translated_273_residues MSESAHDPLPTVWNPDDRIGDMLKGLRGLVVGVANESSIAFGCAAKLRAFGAEVALTYADERTRDFVAPLAAQIGASLLL PLNVEQPGELDAVFARLRQDWGRLDFVVHSIAFAPKDDLHGRVIDCSADGFTRAMRISVYSFLELSRAAEQLMTQGGTLL TMSYYGADKVVNNYNIMGLAKASLEASVRYLAAELGGKNIRVYAVSPGPLKTRAASGIAHFDELVEAAVNRSPGRRLVDI AEIGRVVAFLVGGGASGMTGDTIYVDAGLHNMA >Mature_272_residues SESAHDPLPTVWNPDDRIGDMLKGLRGLVVGVANESSIAFGCAAKLRAFGAEVALTYADERTRDFVAPLAAQIGASLLLP LNVEQPGELDAVFARLRQDWGRLDFVVHSIAFAPKDDLHGRVIDCSADGFTRAMRISVYSFLELSRAAEQLMTQGGTLLT MSYYGADKVVNNYNIMGLAKASLEASVRYLAAELGGKNIRVYAVSPGPLKTRAASGIAHFDELVEAAVNRSPGRRLVDIA EIGRVVAFLVGGGASGMTGDTIYVDAGLHNMA
Specific function: Fatty acid biosynthesis pathway; second reduction step. [C]
COG id: COG0623
COG function: function code I; Enoyl-[acyl-carrier-protein] reductase (NADH)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. FabI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787545, Length=249, Percent_Identity=41.7670682730924, Blast_Score=201, Evalue=6e-53, Organism=Escherichia coli, GI1787905, Length=262, Percent_Identity=26.3358778625954, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=27.3858921161826, Blast_Score=62, Evalue=5e-11, Organism=Drosophila melanogaster, GI23397609, Length=187, Percent_Identity=26.2032085561497, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR014358 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.3.1.9 [H]
Molecular weight: Translated: 29115; Mature: 28983
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESAHDPLPTVWNPDDRIGDMLKGLRGLVVGVANESSIAFGCAAKLRAFGAEVALTYAD CCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHCCCEEEEEECC ERTRDFVAPLAAQIGASLLLPLNVEQPGELDAVFARLRQDWGRLDFVVHSIAFAPKDDLH HHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GRVIDCSADGFTRAMRISVYSFLELSRAAEQLMTQGGTLLTMSYYGADKVVNNYNIMGLA CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCEEEEE KASLEASVRYLAAELGGKNIRVYAVSPGPLKTRAASGIAHFDELVEAAVNRSPGRRLVDI HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHH AEIGRVVAFLVGGGASGMTGDTIYVDAGLHNMA HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC >Mature Secondary Structure SESAHDPLPTVWNPDDRIGDMLKGLRGLVVGVANESSIAFGCAAKLRAFGAEVALTYAD CCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHCCCEEEEEECC ERTRDFVAPLAAQIGASLLLPLNVEQPGELDAVFARLRQDWGRLDFVVHSIAFAPKDDLH HHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GRVIDCSADGFTRAMRISVYSFLELSRAAEQLMTQGGTLLTMSYYGADKVVNNYNIMGLA CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCEEEEE KASLEASVRYLAAELGGKNIRVYAVSPGPLKTRAASGIAHFDELVEAAVNRSPGRRLVDI HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHH AEIGRVVAFLVGGGASGMTGDTIYVDAGLHNMA HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]