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The map label for this gene is ytfH [H]

Identifier: 146342993

GI number: 146342993

Start: 6407248

End: 6407682

Strand: Direct

Name: ytfH [H]

Synonym: BRADO6176

Alternate gene names: 146342993

Gene position: 6407248-6407682 (Clockwise)

Preceding gene: 146342991

Following gene: 146342994

Centisome position: 85.93

GC content: 66.67

Gene sequence:

>435_bases
ATGAAGGGAACTGCCCCGGCCAAGGCGTTCGCTGACGCATCGGCGCCTGCGGAGGGGCCGCGCGCCTGGAAGGAGAAGTT
CGTTTCGATCGACGACTGCCCGATCCGCACGGTGATCAATCAGATCGGCGATAAATGGAGCGTGCTGATCCTCGCCGTGC
TCGGCACCCGTCCGCATCGTTTCGGCGAGCTCAGGCGCGAGATCGATGACATCTCGCAACGCATGCTGACGCAGACCCTG
CGCGACCTGCAGCGCGACGGGCTGATTGCGCGGCGCGTCATCCCCACCGTGCCGCCGAGTGTCGAGTACAGCGTCACGGC
GCTCGGGCAGAGCCTGCTCGAGCCGATGTCGCGCCTGATCGGCTGGGCCGAGCAGCACCAGGCCGAGATCAAATCGGCGC
GGCAGAGATTCGACGAGAGCGTCGCGCCGGAGTGA

Upstream 100 bases:

>100_bases
ACGCTGCGCGCAGCGGGCTAAGGTCTCTTTCTGAGACCTGCACTACATTAGGAACGGGCATCGTTTGTCGAAAGAAGGCA
GTTTTCTGGGAGATAGGCAC

Downstream 100 bases:

>100_bases
GCGATCGCAACGCAGACGCGTCTTGTTCGCACGCAGCTATGGCTTAAGGGTCTTGCAGCAGCGCTCCACCTGCTAAGCAG
CCATCGCATCTGCCCACTCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKGTAPAKAFADASAPAEGPRAWKEKFVSIDDCPIRTVINQIGDKWSVLILAVLGTRPHRFGELRREIDDISQRMLTQTL
RDLQRDGLIARRVIPTVPPSVEYSVTALGQSLLEPMSRLIGWAEQHQAEIKSARQRFDESVAPE

Sequences:

>Translated_144_residues
MKGTAPAKAFADASAPAEGPRAWKEKFVSIDDCPIRTVINQIGDKWSVLILAVLGTRPHRFGELRREIDDISQRMLTQTL
RDLQRDGLIARRVIPTVPPSVEYSVTALGQSLLEPMSRLIGWAEQHQAEIKSARQRFDESVAPE
>Mature_144_residues
MKGTAPAKAFADASAPAEGPRAWKEKFVSIDDCPIRTVINQIGDKWSVLILAVLGTRPHRFGELRREIDDISQRMLTQTL
RDLQRDGLIARRVIPTVPPSVEYSVTALGQSLLEPMSRLIGWAEQHQAEIKSARQRFDESVAPE

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=111, Percent_Identity=40.5405405405405, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 16089; Mature: 16089

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTAPAKAFADASAPAEGPRAWKEKFVSIDDCPIRTVINQIGDKWSVLILAVLGTRPHR
CCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHH
FGELRREIDDISQRMLTQTLRDLQRDGLIARRVIPTVPPSVEYSVTALGQSLLEPMSRLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GWAEQHQAEIKSARQRFDESVAPE
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKGTAPAKAFADASAPAEGPRAWKEKFVSIDDCPIRTVINQIGDKWSVLILAVLGTRPHR
CCCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHH
FGELRREIDDISQRMLTQTLRDLQRDGLIARRVIPTVPPSVEYSVTALGQSLLEPMSRLI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
GWAEQHQAEIKSARQRFDESVAPE
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]