| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342935
Identifier: 146342935
GI number: 146342935
Start: 6343209
End: 6344399
Strand: Direct
Name: 146342935
Synonym: BRADO6116
Alternate gene names: NA
Gene position: 6343209-6344399 (Clockwise)
Preceding gene: 146342934
Following gene: 146342938
Centisome position: 85.07
GC content: 64.9
Gene sequence:
>1191_bases ATGCGCGCGATTTTGCTTGCGCTGGCCGTGATTGCAGCGGCCGCGCCGGAACTCGGTTGGGCCCAGAGCAAGAGCGGGAC CAAGGCCCCCGCCAACGAGACTCGCTACTTCACCGCCCTCGACGGCCTGATGGACGGCAATGCCGACGTGATCCTGAAGG AGACGCGCCAAGGCAAGACCGTCACCGCGGCCACGCTCGATGTCTGCTATCCCGTCGCGAAGAATTCCGATCGCAAGGAT CGCTTCGTCGTCAACCTCACCGTCAATGGCCAGACCCTGACCGGCGCGACCCAGAGCAACGGCGCCAAGGAGCCTGTCAC GGTGAAGCTGACGCGCAAGCCGACCGGTGACAATTTCGAGTTCCGCGGCCAGATCGTCATCGGCAAGACGGTGACCGAAG TGGCGTCGACCGACAACGCCGATGTCAGCGAGAAGGAGTTCCAGGAGAGCCAGTCGAACGACGACGGCATCACGGCGCAG CCGAAGGACTTCACGGATGTGTCGCCGGAGGCCGTTTCCGTTCGCCTGAAGCTGGATGCGGTGCCTGATTTCTTGAAGAG TCTGAAGGGCGAGCATGTGGAGGTCTCGCTGTCCAGCCTGATCGTGAGCTGCGACGCCTTGCGCGCGGGCGAGCAGACCA TCAGCATGACGGTGGATCCCGAGCGCGCCGGGGCCCTGATCGCGAAGGCGCGCGCGACGACCGGCGTTGTCACGGCCGGC TGGACCGCAGGCACGGTCGAGATGGACCGCACCATCCGCTTCGCCGCGGCCGACTGGCGCGACGGCGACAAGATCAACCG CGACAAGCTGGCAAACGCGATCTCAGACGTGCTTGCGAAAACCTATGCCGCCAAGCCGACCAGCGCCGCCTGGAACCCGG TGACCGGCAAGCTGAAGCTGACCTTGAAGCGACCGAGCCAGCTGATGCCCTCGCTCGACCTCACTGATGTCATCGAGCTC ACCGGCCTGGTCTCGCCCGACAAGCCCGGCGGAGCCGACGCGCTGATCCTGTGGATCAGCAGCCCGACGACGACCACCGT CGACGAAAGCTCCGCTGCCAAACTTATCCTGTCCGACGAATCGTCGGGCGATGAGGAAAGCGATGCGCGCGACGACAGCG GCACCATCGAGGAGCTCGCCAAGGCCTTCAAGGCCAAGCGCTGGGACGCGGACAACTCGGTGTGGAAGTAA
Upstream 100 bases:
>100_bases CCGGGCGGCCTTCTTTTTGGCCGAGTGTCCGAGTGGGGGTGCAGTGATTGCAAATCGGCGCTACAGCTAGCGCCGATTCC GCTCCCACAAGGATTTTCAG
Downstream 100 bases:
>100_bases GGCCTCCCCTTTCCTGAGCATGGTCCTTTGAAAGCTGGTTTATGTTTTCCGGACCATTCTTGACCGGGCCGTGTTTGAAA CGAGCGTTTGGCGGGAACGA
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MRAILLALAVIAAAAPELGWAQSKSGTKAPANETRYFTALDGLMDGNADVILKETRQGKTVTAATLDVCYPVAKNSDRKD RFVVNLTVNGQTLTGATQSNGAKEPVTVKLTRKPTGDNFEFRGQIVIGKTVTEVASTDNADVSEKEFQESQSNDDGITAQ PKDFTDVSPEAVSVRLKLDAVPDFLKSLKGEHVEVSLSSLIVSCDALRAGEQTISMTVDPERAGALIAKARATTGVVTAG WTAGTVEMDRTIRFAAADWRDGDKINRDKLANAISDVLAKTYAAKPTSAAWNPVTGKLKLTLKRPSQLMPSLDLTDVIEL TGLVSPDKPGGADALILWISSPTTTTVDESSAAKLILSDESSGDEESDARDDSGTIEELAKAFKAKRWDADNSVWK
Sequences:
>Translated_396_residues MRAILLALAVIAAAAPELGWAQSKSGTKAPANETRYFTALDGLMDGNADVILKETRQGKTVTAATLDVCYPVAKNSDRKD RFVVNLTVNGQTLTGATQSNGAKEPVTVKLTRKPTGDNFEFRGQIVIGKTVTEVASTDNADVSEKEFQESQSNDDGITAQ PKDFTDVSPEAVSVRLKLDAVPDFLKSLKGEHVEVSLSSLIVSCDALRAGEQTISMTVDPERAGALIAKARATTGVVTAG WTAGTVEMDRTIRFAAADWRDGDKINRDKLANAISDVLAKTYAAKPTSAAWNPVTGKLKLTLKRPSQLMPSLDLTDVIEL TGLVSPDKPGGADALILWISSPTTTTVDESSAAKLILSDESSGDEESDARDDSGTIEELAKAFKAKRWDADNSVWK >Mature_396_residues MRAILLALAVIAAAAPELGWAQSKSGTKAPANETRYFTALDGLMDGNADVILKETRQGKTVTAATLDVCYPVAKNSDRKD RFVVNLTVNGQTLTGATQSNGAKEPVTVKLTRKPTGDNFEFRGQIVIGKTVTEVASTDNADVSEKEFQESQSNDDGITAQ PKDFTDVSPEAVSVRLKLDAVPDFLKSLKGEHVEVSLSSLIVSCDALRAGEQTISMTVDPERAGALIAKARATTGVVTAG WTAGTVEMDRTIRFAAADWRDGDKINRDKLANAISDVLAKTYAAKPTSAAWNPVTGKLKLTLKRPSQLMPSLDLTDVIEL TGLVSPDKPGGADALILWISSPTTTTVDESSAAKLILSDESSGDEESDARDDSGTIEELAKAFKAKRWDADNSVWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42217; Mature: 42217
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAILLALAVIAAAAPELGWAQSKSGTKAPANETRYFTALDGLMDGNADVILKETRQGKT CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCEEEEECCCCCE VTAATLDVCYPVAKNSDRKDRFVVNLTVNGQTLTGATQSNGAKEPVTVKLTRKPTGDNFE EEEEEHHHHHHHCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEEEEECCCCCCEE FRGQIVIGKTVTEVASTDNADVSEKEFQESQSNDDGITAQPKDFTDVSPEAVSVRLKLDA EEEEEEECCHHHHHHCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEEEEECC VPDFLKSLKGEHVEVSLSSLIVSCDALRAGEQTISMTVDPERAGALIAKARATTGVVTAG HHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCEEEEEEECHHHHCCEEEECCCCCCEEEEC WTAGTVEMDRTIRFAAADWRDGDKINRDKLANAISDVLAKTYAAKPTSAAWNPVTGKLKL CCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE TLKRPSQLMPSLDLTDVIELTGLVSPDKPGGADALILWISSPTTTTVDESSAAKLILSDE EEECCHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEECCCCCEEEEEECC SSGDEESDARDDSGTIEELAKAFKAKRWDADNSVWK CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRAILLALAVIAAAAPELGWAQSKSGTKAPANETRYFTALDGLMDGNADVILKETRQGKT CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCCCCCEEEEECCCCCE VTAATLDVCYPVAKNSDRKDRFVVNLTVNGQTLTGATQSNGAKEPVTVKLTRKPTGDNFE EEEEEHHHHHHHCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEEEEECCCCCCEE FRGQIVIGKTVTEVASTDNADVSEKEFQESQSNDDGITAQPKDFTDVSPEAVSVRLKLDA EEEEEEECCHHHHHHCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCEEEEEEEECC VPDFLKSLKGEHVEVSLSSLIVSCDALRAGEQTISMTVDPERAGALIAKARATTGVVTAG HHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCEEEEEEECHHHHCCEEEECCCCCCEEEEC WTAGTVEMDRTIRFAAADWRDGDKINRDKLANAISDVLAKTYAAKPTSAAWNPVTGKLKL CCCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEE TLKRPSQLMPSLDLTDVIELTGLVSPDKPGGADALILWISSPTTTTVDESSAAKLILSDE EEECCHHHCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCEEECCCCCEEEEEECC SSGDEESDARDDSGTIEELAKAFKAKRWDADNSVWK CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA