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The map label for this gene is yfdH [C]

Identifier: 146342927

GI number: 146342927

Start: 6335219

End: 6336259

Strand: Direct

Name: yfdH [C]

Synonym: BRADO6108

Alternate gene names: 146342927

Gene position: 6335219-6336259 (Clockwise)

Preceding gene: 146342926

Following gene: 146342928

Centisome position: 84.96

GC content: 66.28

Gene sequence:

>1041_bases
ATGCTGGGAACTGACGTGTCCGACCTGACCACGACCGCGGCGGATGCCGCGTCGCAGGGCCTGTCGATCGTTATCCCCGT
CTACAACGAAGGCGCGGGACTGACGGCGCTGCATGAGCGGCTGAACACGCTCGCCCGCACGCTGCGGCAGCGCTTCGGCT
TGGCTTGCGAGCTCGTCTATGTCGACGATGGCAGCCGCGACAACACGCTGGCGATCGCGCGCAACCTGCAGGCCGATGCG
CTCGACGTGCAGGTGGTGTCGCTGTCGCGCAATTTCGGCAAGGAGGCAGCGCTGATGGCCGGCCTCGATCATGCCCGCCG
TGGCGCCGTGCTGTTCATGGATGGCGATGGGCAGCATCCGCCGGCGCTGGTCGAGCAGCTCGTCACGCACTGGATCAAGG
ACGGCTATGACGTCGTCTATACGGCCAAGGCACATCGCGACAACGAGCCGTTCCTGCGCCGCGTCGCCGTGCATGGCTTC
TACGCGCTGATCAACTGGGGGGCGCGGCAGAAGATTCCGGAGGATGCCGGCGACTTCCGCCTGCTGTCGCCGCGCGCCGT
TGCAGCACTTCGCCAGCTGCCGGAGCGCAACCGCTTCTTCAAGGGCCTCGCCAGCTGGATCGGCTTCCGCCAGATCCGCG
TCGACTACGAGCCCGCCGCACGGGCACACGGCGTCACGACCTTCAACGTGACGAGCCTGCTCGGCCTGTCGATCGAAGGC
CTGACCTCGTTCTCGGTGGCGCCGCTGCGTTTCGCCAGCCTGCTCGGAATCCTGCTCGCCTCAGCCGCCTTCCTGTTCGG
CCTCTCGATCCTGTGGGAGACCTTCACCACCGGCAAGTCGGTGCCCGGCTATCCCTCGCTGATGGTCGGCCTGATGACGA
TCGGCGGCGTGCAGCTGATCATGATCGGTATCATGGGCGAATATATTGGCAAGATCCTCTCCGAGCTGAAGGCGCGGCCG
ATCTACTTCGTCGCCGAGCACAGCGAGAAGCGCGCCACCTTGGACGCGCGCAGCGACGGCGAGAGGAACGCCGCCGAATG
A

Upstream 100 bases:

>100_bases
GCCCGCCTCGAAGCCTTCCTGCGATCATAAATCGCCGTTCATCGTAGCGACAGGCAGCGGCAGCTACCATATGTTGGTGG
GCGAACGAGGATGCTGAGCA

Downstream 100 bases:

>100_bases
GCGAGGCGCCGCACCGGCGCATCTGGCTGTGCGCGGATGACTATGGCATCAGCCCCGGCGTCAACAAGGCGATCCGCGAC
CTGATCGCCCGCGGCCGCCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MLGTDVSDLTTTAADAASQGLSIVIPVYNEGAGLTALHERLNTLARTLRQRFGLACELVYVDDGSRDNTLAIARNLQADA
LDVQVVSLSRNFGKEAALMAGLDHARRGAVLFMDGDGQHPPALVEQLVTHWIKDGYDVVYTAKAHRDNEPFLRRVAVHGF
YALINWGARQKIPEDAGDFRLLSPRAVAALRQLPERNRFFKGLASWIGFRQIRVDYEPAARAHGVTTFNVTSLLGLSIEG
LTSFSVAPLRFASLLGILLASAAFLFGLSILWETFTTGKSVPGYPSLMVGLMTIGGVQLIMIGIMGEYIGKILSELKARP
IYFVAEHSEKRATLDARSDGERNAAE

Sequences:

>Translated_346_residues
MLGTDVSDLTTTAADAASQGLSIVIPVYNEGAGLTALHERLNTLARTLRQRFGLACELVYVDDGSRDNTLAIARNLQADA
LDVQVVSLSRNFGKEAALMAGLDHARRGAVLFMDGDGQHPPALVEQLVTHWIKDGYDVVYTAKAHRDNEPFLRRVAVHGF
YALINWGARQKIPEDAGDFRLLSPRAVAALRQLPERNRFFKGLASWIGFRQIRVDYEPAARAHGVTTFNVTSLLGLSIEG
LTSFSVAPLRFASLLGILLASAAFLFGLSILWETFTTGKSVPGYPSLMVGLMTIGGVQLIMIGIMGEYIGKILSELKARP
IYFVAEHSEKRATLDARSDGERNAAE
>Mature_346_residues
MLGTDVSDLTTTAADAASQGLSIVIPVYNEGAGLTALHERLNTLARTLRQRFGLACELVYVDDGSRDNTLAIARNLQADA
LDVQVVSLSRNFGKEAALMAGLDHARRGAVLFMDGDGQHPPALVEQLVTHWIKDGYDVVYTAKAHRDNEPFLRRVAVHGF
YALINWGARQKIPEDAGDFRLLSPRAVAALRQLPERNRFFKGLASWIGFRQIRVDYEPAARAHGVTTFNVTSLLGLSIEG
LTSFSVAPLRFASLLGILLASAAFLFGLSILWETFTTGKSVPGYPSLMVGLMTIGGVQLIMIGIMGEYIGKILSELKARP
IYFVAEHSEKRATLDARSDGERNAAE

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=304, Percent_Identity=39.1447368421053, Blast_Score=225, Evalue=3e-60,
Organism=Escherichia coli, GI1788588, Length=311, Percent_Identity=32.1543408360129, Blast_Score=145, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24582769, Length=184, Percent_Identity=30.4347826086957, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 37701; Mature: 37701

Theoretical pI: Translated: 7.30; Mature: 7.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTDVSDLTTTAADAASQGLSIVIPVYNEGAGLTALHERLNTLARTLRQRFGLACELVY
CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
VDDGSRDNTLAIARNLQADALDVQVVSLSRNFGKEAALMAGLDHARRGAVLFMDGDGQHP
ECCCCCCCEEEEECCCCCCCEEEEEEEEHHCCCHHHHHHHCCHHHHCCEEEEECCCCCCC
PALVEQLVTHWIKDGYDVVYTAKAHRDNEPFLRRVAVHGFYALINWGARQKIPEDAGDFR
HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEE
LLSPRAVAALRQLPERNRFFKGLASWIGFRQIRVDYEPAARAHGVTTFNVTSLLGLSIEG
EECHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCEEEEHHHHHHCCCCC
LTSFSVAPLRFASLLGILLASAAFLFGLSILWETFTTGKSVPGYPSLMVGLMTIGGVQLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHH
MIGIMGEYIGKILSELKARPIYFVAEHSEKRATLDARSDGERNAAE
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLGTDVSDLTTTAADAASQGLSIVIPVYNEGAGLTALHERLNTLARTLRQRFGLACELVY
CCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEE
VDDGSRDNTLAIARNLQADALDVQVVSLSRNFGKEAALMAGLDHARRGAVLFMDGDGQHP
ECCCCCCCEEEEECCCCCCCEEEEEEEEHHCCCHHHHHHHCCHHHHCCEEEEECCCCCCC
PALVEQLVTHWIKDGYDVVYTAKAHRDNEPFLRRVAVHGFYALINWGARQKIPEDAGDFR
HHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCCCEE
LLSPRAVAALRQLPERNRFFKGLASWIGFRQIRVDYEPAARAHGVTTFNVTSLLGLSIEG
EECHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEECCCCCHHHCCCEEEEHHHHHHCCCCC
LTSFSVAPLRFASLLGILLASAAFLFGLSILWETFTTGKSVPGYPSLMVGLMTIGGVQLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCHHHHH
MIGIMGEYIGKILSELKARPIYFVAEHSEKRATLDARSDGERNAAE
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]