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The map label for this gene is ydjC [C]

Identifier: 146342928

GI number: 146342928

Start: 6336256

End: 6337098

Strand: Direct

Name: ydjC [C]

Synonym: BRADO6109

Alternate gene names: 146342928

Gene position: 6336256-6337098 (Clockwise)

Preceding gene: 146342927

Following gene: 146342929

Centisome position: 84.98

GC content: 69.75

Gene sequence:

>843_bases
ATGAGCGAGGCGCCGCACCGGCGCATCTGGCTGTGCGCGGATGACTATGGCATCAGCCCCGGCGTCAACAAGGCGATCCG
CGACCTGATCGCCCGCGGCCGCCTGAACGCGACCTCGGTCATGACCGTCGGCGCGGCGATCGGACGCGACGAGGTGGCCG
AGCTGACCAAGGTCGCCGCCGACAGCCCGCGTTGCGCCATCGGCCTGCACGTCACGCTGACCGCGCCCTTCCGGCCGCTG
ACGATGCATTTCCGTCCCGCCGAGGGCGGCATGTTCCTGCCGTTTCCCAGGCTGCTGCGCGCAGGGCTGCTGCGCCGCCT
CGATCCGGAGATGATCCGCGCCGAGGTGGCGGTTCAGCTCACCGCCTTCGGCGAGCTGTTCGGCCGGGCGCCGGATTTCG
TTGACGGGCATCAGCATGCCCAGCTGTACCCGCAGGTGCGCGAGGGTTTTCTGGCCGCCGTCAAGGAGGCGGCGCCGTCG
GCCTGGGTCCGCCAGGGCGGCCGCAACCTGCCGCTGATGCAGCGGCTCGCGGCGCCAAAGGCGCTGCTGCTCGACGTACT
GAGCGCGCAATTCCGCCGCCACGCCGCGCGCGCCAGAATCCCCTTCAACCCCGCTTTCGCTGGCGCCTACGATTTCACGA
AAGCCTCCGACTTCGGGGCGCTGATGGACGGCTTCCTGAACGACCTGCCGGAGGATGGACTGGTGATGTGCCATCCCGGC
TTCGTCGACGACGTCCTGATCGAGCTCGATCCGCTGACCGTGCAGCGCGAGCACGAGCATGCCTATCTCGCCGGCGAGCA
CTTCCCGGACCTGCTCGCGCGCCGCCAGATGACGCTGGCCTGA

Upstream 100 bases:

>100_bases
TCTCCGAGCTGAAGGCGCGGCCGATCTACTTCGTCGCCGAGCACAGCGAGAAGCGCGCCACCTTGGACGCGCGCAGCGAC
GGCGAGAGGAACGCCGCCGA

Downstream 100 bases:

>100_bases
ACCTTTCGCGCCAGCGGCGAACAAAATGCCGGCTGGCCGCGTTTGCGTCGCAAGCCCGGCAGACGCTTTGTCGCATACGG
AAATTTAATCCGCAGCCCAA

Product: putative YdjC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSEAPHRRIWLCADDYGISPGVNKAIRDLIARGRLNATSVMTVGAAIGRDEVAELTKVAADSPRCAIGLHVTLTAPFRPL
TMHFRPAEGGMFLPFPRLLRAGLLRRLDPEMIRAEVAVQLTAFGELFGRAPDFVDGHQHAQLYPQVREGFLAAVKEAAPS
AWVRQGGRNLPLMQRLAAPKALLLDVLSAQFRRHAARARIPFNPAFAGAYDFTKASDFGALMDGFLNDLPEDGLVMCHPG
FVDDVLIELDPLTVQREHEHAYLAGEHFPDLLARRQMTLA

Sequences:

>Translated_280_residues
MSEAPHRRIWLCADDYGISPGVNKAIRDLIARGRLNATSVMTVGAAIGRDEVAELTKVAADSPRCAIGLHVTLTAPFRPL
TMHFRPAEGGMFLPFPRLLRAGLLRRLDPEMIRAEVAVQLTAFGELFGRAPDFVDGHQHAQLYPQVREGFLAAVKEAAPS
AWVRQGGRNLPLMQRLAAPKALLLDVLSAQFRRHAARARIPFNPAFAGAYDFTKASDFGALMDGFLNDLPEDGLVMCHPG
FVDDVLIELDPLTVQREHEHAYLAGEHFPDLLARRQMTLA
>Mature_279_residues
SEAPHRRIWLCADDYGISPGVNKAIRDLIARGRLNATSVMTVGAAIGRDEVAELTKVAADSPRCAIGLHVTLTAPFRPLT
MHFRPAEGGMFLPFPRLLRAGLLRRLDPEMIRAEVAVQLTAFGELFGRAPDFVDGHQHAQLYPQVREGFLAAVKEAAPSA
WVRQGGRNLPLMQRLAAPKALLLDVLSAQFRRHAARARIPFNPAFAGAYDFTKASDFGALMDGFLNDLPEDGLVMCHPGF
VDDVLIELDPLTVQREHEHAYLAGEHFPDLLARRQMTLA

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family [H]

Homologues:

Organism=Escherichia coli, GI1788028, Length=269, Percent_Identity=28.6245353159851, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948 [H]

Pfam domain/function: PF04794 YdjC [H]

EC number: NA

Molecular weight: Translated: 30833; Mature: 30702

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAPHRRIWLCADDYGISPGVNKAIRDLIARGRLNATSVMTVGAAIGRDEVAELTKVAA
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHC
DSPRCAIGLHVTLTAPFRPLTMHFRPAEGGMFLPFPRLLRAGLLRRLDPEMIRAEVAVQL
CCCCEEEEEEEEEECCCCEEEEEEEECCCCEECCHHHHHHHHHHHHCCHHHHHHHHHHHH
TAFGELFGRAPDFVDGHQHAQLYPQVREGFLAAVKEAAPSAWVRQGGRNLPLMQRLAAPK
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHCCCH
ALLLDVLSAQFRRHAARARIPFNPAFAGAYDFTKASDFGALMDGFLNDLPEDGLVMCHPG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCC
FVDDVLIELDPLTVQREHEHAYLAGEHFPDLLARRQMTLA
CHHHHHEECCCCEEEECCCCEEECCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SEAPHRRIWLCADDYGISPGVNKAIRDLIARGRLNATSVMTVGAAIGRDEVAELTKVAA
CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHC
DSPRCAIGLHVTLTAPFRPLTMHFRPAEGGMFLPFPRLLRAGLLRRLDPEMIRAEVAVQL
CCCCEEEEEEEEEECCCCEEEEEEEECCCCEECCHHHHHHHHHHHHCCHHHHHHHHHHHH
TAFGELFGRAPDFVDGHQHAQLYPQVREGFLAAVKEAAPSAWVRQGGRNLPLMQRLAAPK
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHCCCH
ALLLDVLSAQFRRHAARARIPFNPAFAGAYDFTKASDFGALMDGFLNDLPEDGLVMCHPG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCC
FVDDVLIELDPLTVQREHEHAYLAGEHFPDLLARRQMTLA
CHHHHHEECCCCEEEECCCCEEECCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA