| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hisZ [H]
Identifier: 146342925
GI number: 146342925
Start: 6333014
End: 6334174
Strand: Direct
Name: hisZ [H]
Synonym: BRADO6106
Alternate gene names: 146342925
Gene position: 6333014-6334174 (Clockwise)
Preceding gene: 146342924
Following gene: 146342926
Centisome position: 84.93
GC content: 70.03
Gene sequence:
>1161_bases ATGACCGGACCCGCTCCGACCGGACCCGCCGCGTGGGCGGACACGCTGCTGCAGTCCTTCGCCGAGGCCGGCTATGCCCG CGCCGAGCCGGCGATCCTGCAGCCGGCCGAGCCGTTCCTCGACCTCTCCGGCGAGGACATTCGCAAGAGCCTGTATCTGA CGACGGATGGCGGCGGCGAGGAGCTCTGCCTGCGCCCGGACCTGACCATTCCCGTCGCGCGCGACTATCTCGGCTCGGCT CGCGCCGGCCAGCCCGCCGGATTCAGCTATCTCGGCCCGGTGTTTCGTTACCGCGGCGGCCGCCCGAGCGAGTTCCTGCA GGGCGGCATCGAATCGTTCGGCCGCCAGGATCGTCCCGCCGCCGACGCCGAGATGCTGGCGCTCGCCATCGAGGCGACAG CCGCGGCCGGCCTTGCCGAGGTCGAGATTCGCACCGGCGACGTCGCGCTGTTCACGGCCTTGATCGATGCGCTCGATCTT TATCCGGTGTGGCGGCGCCGGCTGATCAAGGACTTCAACCGCCAGCGCACCTTGGCTCAGGATTTGGAGCGCCTGGCGAC GGCCGAAGTGGCACCGCGCAACGAATATGAGGGCGTGCTCGCCGCGCTGGCCGGCTCAGACCGCAAGGCAGCGTTGGCGC TGGTCACCGACCTGATGTCGATCGCCGGCGCCACCGCCGTGGGTGGCCGCACGGTCGCCGAGATCGCCGATCGATTCCTG GAGCAATCCACCCTGAAAAGCGGCGCACTGCCGCGCGACGCGCTCGACCGCATCAAAAGATTTCTCGCCATCAGCGGCAG CCCGGCTGACGCCGTCAAACAGCTCCGCGCGCTCGCCGCCGACGCCAAGCTCGACATCTCGGCTGCGATCGACGCCCTGG ACGCGCGCACGGCCTTCATGGCCCAGCGCGGCATCGACGTCGCCAGAGTGCGCTTCGCCACCGCATTCGGCCGCGGCCTC GACTACTACACCGGCTTCGAGTTCGAGCTGCACCACCCCGGCAATGGCGACGAGCCGCTGGTCGCCGGCGGCCGCTATGA CGGCCTGCTGAACCAGCTCGGCGCCGCGTCCTTCATTCCGGCCGTCGGCTTCTCGATCTGGATCGAGCGGCTGGCGCAGA GCAGCACGGCGGGCAAGGCCGCGCGCGGGAGAGCATCATGA
Upstream 100 bases:
>100_bases CAGGAGCGACCATTCGGTGTCGAAACCGCGCAATGAGCATGCTAAGGGGCTGCCGCTGCCCGCCGGGCGGCGCGCATCCC GATTTGGAACCAAGACCGAC
Downstream 100 bases:
>100_bases GCGGCCCCCTCGTCCTCGCCGTTCCTTCCAAGGGTCGCCTGCAGGAGAACGCGGAGGCGTTCTTCGGCCGCGCCGGGCTG AACCTGTCCAAGCCGGGCGG
Product: ATP phosphoribosyltransferase regulatory subunit
Products: AMP; diphosphate +L-histidyl-tRNAHis [C]
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTGPAPTGPAAWADTLLQSFAEAGYARAEPAILQPAEPFLDLSGEDIRKSLYLTTDGGGEELCLRPDLTIPVARDYLGSA RAGQPAGFSYLGPVFRYRGGRPSEFLQGGIESFGRQDRPAADAEMLALAIEATAAAGLAEVEIRTGDVALFTALIDALDL YPVWRRRLIKDFNRQRTLAQDLERLATAEVAPRNEYEGVLAALAGSDRKAALALVTDLMSIAGATAVGGRTVAEIADRFL EQSTLKSGALPRDALDRIKRFLAISGSPADAVKQLRALAADAKLDISAAIDALDARTAFMAQRGIDVARVRFATAFGRGL DYYTGFEFELHHPGNGDEPLVAGGRYDGLLNQLGAASFIPAVGFSIWIERLAQSSTAGKAARGRAS
Sequences:
>Translated_386_residues MTGPAPTGPAAWADTLLQSFAEAGYARAEPAILQPAEPFLDLSGEDIRKSLYLTTDGGGEELCLRPDLTIPVARDYLGSA RAGQPAGFSYLGPVFRYRGGRPSEFLQGGIESFGRQDRPAADAEMLALAIEATAAAGLAEVEIRTGDVALFTALIDALDL YPVWRRRLIKDFNRQRTLAQDLERLATAEVAPRNEYEGVLAALAGSDRKAALALVTDLMSIAGATAVGGRTVAEIADRFL EQSTLKSGALPRDALDRIKRFLAISGSPADAVKQLRALAADAKLDISAAIDALDARTAFMAQRGIDVARVRFATAFGRGL DYYTGFEFELHHPGNGDEPLVAGGRYDGLLNQLGAASFIPAVGFSIWIERLAQSSTAGKAARGRAS >Mature_385_residues TGPAPTGPAAWADTLLQSFAEAGYARAEPAILQPAEPFLDLSGEDIRKSLYLTTDGGGEELCLRPDLTIPVARDYLGSAR AGQPAGFSYLGPVFRYRGGRPSEFLQGGIESFGRQDRPAADAEMLALAIEATAAAGLAEVEIRTGDVALFTALIDALDLY PVWRRRLIKDFNRQRTLAQDLERLATAEVAPRNEYEGVLAALAGSDRKAALALVTDLMSIAGATAVGGRTVAEIADRFLE QSTLKSGALPRDALDRIKRFLAISGSPADAVKQLRALAADAKLDISAAIDALDARTAFMAQRGIDVARVRFATAFGRGLD YYTGFEFELHHPGNGDEPLVAGGRYDGLLNQLGAASFIPAVGFSIWIERLAQSSTAGKAARGRAS
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR004516 [H]
Pfam domain/function: PF00587 tRNA-synt_2b [H]
EC number: 6.1.1.21 [C]
Molecular weight: Translated: 41000; Mature: 40869
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS50862 AA_TRNA_LIGASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPAPTGPAAWADTLLQSFAEAGYARAEPAILQPAEPFLDLSGEDIRKSLYLTTDGGGE CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHCCEEEEEECCCCC ELCLRPDLTIPVARDYLGSARAGQPAGFSYLGPVFRYRGGRPSEFLQGGIESFGRQDRPA EEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC ADAEMLALAIEATAAAGLAEVEIRTGDVALFTALIDALDLYPVWRRRLIKDFNRQRTLAQ CCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLERLATAEVAPRNEYEGVLAALAGSDRKAALALVTDLMSIAGATAVGGRTVAEIADRFL HHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH EQSTLKSGALPRDALDRIKRFLAISGSPADAVKQLRALAADAKLDISAAIDALDARTAFM HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AQRGIDVARVRFATAFGRGLDYYTGFEFELHHPGNGDEPLVAGGRYDGLLNQLGAASFIP HHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHCHHHHHH AVGFSIWIERLAQSSTAGKAARGRAS HHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TGPAPTGPAAWADTLLQSFAEAGYARAEPAILQPAEPFLDLSGEDIRKSLYLTTDGGGE CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHCCEEEEEECCCCC ELCLRPDLTIPVARDYLGSARAGQPAGFSYLGPVFRYRGGRPSEFLQGGIESFGRQDRPA EEEECCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC ADAEMLALAIEATAAAGLAEVEIRTGDVALFTALIDALDLYPVWRRRLIKDFNRQRTLAQ CCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLERLATAEVAPRNEYEGVLAALAGSDRKAALALVTDLMSIAGATAVGGRTVAEIADRFL HHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH EQSTLKSGALPRDALDRIKRFLAISGSPADAVKQLRALAADAKLDISAAIDALDARTAFM HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AQRGIDVARVRFATAFGRGLDYYTGFEFELHHPGNGDEPLVAGGRYDGLLNQLGAASFIP HHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHCHHHHHH AVGFSIWIERLAQSSTAGKAARGRAS HHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): 8520 [C]
Specific activity: 121.8
Km value (mM): 0.06 {His}} 0.046 {His}} 0.03 {His}} 0.02 {His}} 0.017 {His}} 0.011 {His}} 0.008 {His}} 0.0014 {tRNAHis}} 0.00056 {tRNAHis}} 0.0016 {U73tRNAHisGUG}} 0.00031 {U73tRNAHisGUG}} 0.89 {ATP}} 0.74 {ATP}} 0.655 {ATP}} 0.5
Substrates: ATP; @HIST01.txt*L-histidine!; tRNAHis [C]
Specific reaction: ATP + @HIST01.txt*L-histidine! + tRNAHis = AMP + diphosphate +L-histidyl-tRNAHis [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: 1, 2, 4-Triazole-3-alanine; D-Histidine; Diphosphate; L-Histidinol; Mg2+; N-Acetyl histidine; NEM; p-Chloromercuribenzoate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA