| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is ilvE [H]
Identifier: 146342859
GI number: 146342859
Start: 6263418
End: 6264497
Strand: Reverse
Name: ilvE [H]
Synonym: BRADO6039
Alternate gene names: 146342859
Gene position: 6264497-6263418 (Counterclockwise)
Preceding gene: 146342863
Following gene: 146342858
Centisome position: 84.01
GC content: 67.59
Gene sequence:
>1080_bases ATGACTTTGACATTCGACATCAGGCCGACGGCGAACCCGACCTCCGACCAGGAGCGGGCGGCCAAGCTCGCCAATCCCGG CTTCGGCCGCGTGTTCACCGATCACATGGCCGTGGTCCAGTACAGCCAGGACAAGGGCTGGCACAGCGCGCGGGTCGAAT CCCGTGCCAACTTCCCGCTCGATCCGGCCGCGGCCGTGCTGCACTACGCGCAGGAGATCTTCGAGGGGCTGAAGGCCTAC AAGCGCGACGATGGCGGCGTGAACCTGTTCCGCCCCGACGCCAACGCCAAGCGCTTCTGGAATTCGGCCGAGCGCATGGC GATGGCGCAGCTGCCCGAGGCGGTCTTCATCGAGGCGGTCGAGCAGCTCGTCCGCATCGACCGCGCCTGGATCCCGGGCG GCGAGGGCAGCCTGTATCTGCGCCCGTTCATGATCGCCAACGAGGTGTTCCTCGGCGTGAAGCCGTCGGCGGAGTACATT TTCGCGGTCATCGCCTCGCCGGTCGGCTCCTATTTCAAGGGCGGCCCGGCCCCGGTCTCGATCTGGGTGTCGGAGAACTA CACCCGGGCCGCGGTCGGCGGCACCGGCGGCGTCAAATGCGGCGGCAACTATGCCGCGAGCCTGAAGGCGCAGGCCGAGG CGATGGCCCAGGGCTGCGATCAGGTCGTGTTCCTGGATGCGATCGAGCGGCGTTACGTCGAGGAGCTCGGCGGCATGAAC GTGTTCTTCGTGTTCGCCGACGGCTCACTGTCGACGCCGCCGCTCGGCACCATCCTGCCGGGCATCACGCGAGACTCCAT CATCAAGCTGGCGCGCGACGCCGGCCGCGAGGTGCGCGAGGAGGCCTATTCGATCGACCAGTGGCGCGCGGATGCCGCAA GCGGCAAGCTCAAGGAAGCCTTCGCCTGCGGCACCGCCGCCGTGATCTCGCCGATCGGCAAGGTCCGCTCGGTGAGCGGC GACGTCGTCATCAATGGCGGCGAGGCCGGCCCGGTGGCCATGGGCCTGCGCAAGCAGCTGGTCGACATCCAGTACGGCCG AACTGCGGATCCGCATAATTGGATCAGGGACGTGAAGTAG
Upstream 100 bases:
>100_bases CCGGTCACGGCAGGTCTGAAATTCAAAGGGCTGACCGACCCGGATCGACGGGGCGGCGCCAGAACTCGCGAACGGCGACC AGAGCGGGGGAAGCAAGGAC
Downstream 100 bases:
>100_bases GGGGCTGCTGCTGCTCCGTTCGCCGTCATGCCCGGGCTTGTCCCGGGCATCCGCGTCGTGCGGCATGAAAGTCGTGGATG GCCGGGTCAAGCCCGGCCAT
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MTLTFDIRPTANPTSDQERAAKLANPGFGRVFTDHMAVVQYSQDKGWHSARVESRANFPLDPAAAVLHYAQEIFEGLKAY KRDDGGVNLFRPDANAKRFWNSAERMAMAQLPEAVFIEAVEQLVRIDRAWIPGGEGSLYLRPFMIANEVFLGVKPSAEYI FAVIASPVGSYFKGGPAPVSIWVSENYTRAAVGGTGGVKCGGNYAASLKAQAEAMAQGCDQVVFLDAIERRYVEELGGMN VFFVFADGSLSTPPLGTILPGITRDSIIKLARDAGREVREEAYSIDQWRADAASGKLKEAFACGTAAVISPIGKVRSVSG DVVINGGEAGPVAMGLRKQLVDIQYGRTADPHNWIRDVK
Sequences:
>Translated_359_residues MTLTFDIRPTANPTSDQERAAKLANPGFGRVFTDHMAVVQYSQDKGWHSARVESRANFPLDPAAAVLHYAQEIFEGLKAY KRDDGGVNLFRPDANAKRFWNSAERMAMAQLPEAVFIEAVEQLVRIDRAWIPGGEGSLYLRPFMIANEVFLGVKPSAEYI FAVIASPVGSYFKGGPAPVSIWVSENYTRAAVGGTGGVKCGGNYAASLKAQAEAMAQGCDQVVFLDAIERRYVEELGGMN VFFVFADGSLSTPPLGTILPGITRDSIIKLARDAGREVREEAYSIDQWRADAASGKLKEAFACGTAAVISPIGKVRSVSG DVVINGGEAGPVAMGLRKQLVDIQYGRTADPHNWIRDVK >Mature_358_residues TLTFDIRPTANPTSDQERAAKLANPGFGRVFTDHMAVVQYSQDKGWHSARVESRANFPLDPAAAVLHYAQEIFEGLKAYK RDDGGVNLFRPDANAKRFWNSAERMAMAQLPEAVFIEAVEQLVRIDRAWIPGGEGSLYLRPFMIANEVFLGVKPSAEYIF AVIASPVGSYFKGGPAPVSIWVSENYTRAAVGGTGGVKCGGNYAASLKAQAEAMAQGCDQVVFLDAIERRYVEELGGMNV FFVFADGSLSTPPLGTILPGITRDSIIKLARDAGREVREEAYSIDQWRADAASGKLKEAFACGTAAVISPIGKVRSVSGD VVINGGEAGPVAMGLRKQLVDIQYGRTADPHNWIRDVK
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=332, Percent_Identity=40.6626506024096, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI38176287, Length=332, Percent_Identity=40.6626506024096, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI296010906, Length=332, Percent_Identity=40.6626506024096, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI50658084, Length=354, Percent_Identity=37.5706214689266, Blast_Score=233, Evalue=3e-61, Organism=Homo sapiens, GI296010902, Length=332, Percent_Identity=36.4457831325301, Blast_Score=199, Evalue=3e-51, Organism=Homo sapiens, GI296010900, Length=332, Percent_Identity=36.4457831325301, Blast_Score=198, Evalue=5e-51, Organism=Homo sapiens, GI258614015, Length=293, Percent_Identity=37.2013651877133, Blast_Score=187, Evalue=1e-47, Organism=Escherichia coli, GI48994963, Length=326, Percent_Identity=34.3558282208589, Blast_Score=125, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17568601, Length=363, Percent_Identity=34.435261707989, Blast_Score=219, Evalue=1e-57, Organism=Caenorhabditis elegans, GI17565728, Length=349, Percent_Identity=34.0974212034384, Blast_Score=183, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6322002, Length=366, Percent_Identity=37.9781420765027, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6322608, Length=345, Percent_Identity=37.3913043478261, Blast_Score=222, Evalue=9e-59, Organism=Drosophila melanogaster, GI24641779, Length=335, Percent_Identity=40.5970149253731, Blast_Score=236, Evalue=1e-62,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 38852; Mature: 38721
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTFDIRPTANPTSDQERAAKLANPGFGRVFTDHMAVVQYSQDKGWHSARVESRANFPL CEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHEEEEECCCCCCCHHHHCCCCCCCC DPAAAVLHYAQEIFEGLKAYKRDDGGVNLFRPDANAKRFWNSAERMAMAQLPEAVFIEAV CHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHH EQLVRIDRAWIPGGEGSLYLRPFMIANEVFLGVKPSAEYIFAVIASPVGSYFKGGPAPVS HHHHHHHHHCCCCCCCCEEEEEEEEECEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEE IWVSENYTRAAVGGTGGVKCGGNYAASLKAQAEAMAQGCDQVVFLDAIERRYVEELGGMN EEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCE VFFVFADGSLSTPPLGTILPGITRDSIIKLARDAGREVREEAYSIDQWRADAASGKLKEA EEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FACGTAAVISPIGKVRSVSGDVVINGGEAGPVAMGLRKQLVDIQYGRTADPHNWIRDVK HHCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCC >Mature Secondary Structure TLTFDIRPTANPTSDQERAAKLANPGFGRVFTDHMAVVQYSQDKGWHSARVESRANFPL EEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHHHHEEEEECCCCCCCHHHHCCCCCCCC DPAAAVLHYAQEIFEGLKAYKRDDGGVNLFRPDANAKRFWNSAERMAMAQLPEAVFIEAV CHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHH EQLVRIDRAWIPGGEGSLYLRPFMIANEVFLGVKPSAEYIFAVIASPVGSYFKGGPAPVS HHHHHHHHHCCCCCCCCEEEEEEEEECEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEE IWVSENYTRAAVGGTGGVKCGGNYAASLKAQAEAMAQGCDQVVFLDAIERRYVEELGGMN EEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCE VFFVFADGSLSTPPLGTILPGITRDSIIKLARDAGREVREEAYSIDQWRADAASGKLKEA EEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FACGTAAVISPIGKVRSVSGDVVINGGEAGPVAMGLRKQLVDIQYGRTADPHNWIRDVK HHCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]