Click here to switch to the map view.

The map label for this gene is coxM [H]

Identifier: 146342851

GI number: 146342851

Start: 6254808

End: 6255671

Strand: Reverse

Name: coxM [H]

Synonym: BRADO6031

Alternate gene names: 146342851

Gene position: 6255671-6254808 (Counterclockwise)

Preceding gene: 146342852

Following gene: 146342850

Centisome position: 83.89

GC content: 69.56

Gene sequence:

>864_bases
ATGATTCCTGGCCCGTTCGACTATCACCGGCCTGCCAGCGTCGGCGATGCGATCAAGCTGCTCGCCGATCTCGGCGACGA
GGCCCGCCCGCTCGCCGGCGGCCATAGCCTGCTGCCGATGATGAAGCTGCGGCTGGCGACCCCGGCGCATCTGGTCGATC
TGCACGGCATCGCCGGCCTCAAGGGCATCTGCCGCGATGGCGACCGCATCGTGATCGGCGCCATGACGACCCAGGCCGAG
CTGCTGGCGTCCGCCGAGATCGGCACCACCCTGCCGATTCTGCACGAGACGGCGCTTTTGATCGCCGATCCGCAGGTGCG
CTACCGCGGCACGCTCGGCGGCAACGTCGCCAATGGCGATCCCGGCAACGACATGCCGGCGCTGATGCTGGCGCTGGACG
CGAGCTATCGGCTGGAAGGCCCGAACGGCGCCCGCGAAGTTGCCGCGCGCGACTTCTACCAGGGCGCGTACTTCACCGCG
CTCGAGCCTGGCGAGATCCTGACCAGGGTCAGCATTCCAGTTCCGCCGGCGGGGCACGGGCATGCCTATGAGAAGCTGAA
GCGCAAGGTCGGCGACTATGCGACCGCTGCGGCCGGCGTCGTGCTGACCATGGCCGGCGGCAAGGTCGCGACTTGCGTGA
TCGCGCTGACCAACCTGCACGAGACGCCGCTGCTGGCGACCGACGCGGCGAACGCGGTGATCGGGACCACGTTGGATGAT
GCGGCGCTGAAGGCGGCCGCGACCGCCGCACGCGCGATCATGCAGCCGGCGTCAGACGCGCGCGGCCCGGCCGAATATCG
CATCCATGTCGGTGGCATCATGGTGATGCGCGCGCTGCAGCGCGCGGCGAGCCGGGCGAAGTAG

Upstream 100 bases:

>100_bases
CTTTCGCTGCTGCAGCACGAACGTCCGTCGCAGCAAGCACCGGTCGCAGCAAGCAAACGGCCAAGCCGCAAAAGGCAGGC
CAGCACAGGAGGGAACCAGC

Downstream 100 bases:

>100_bases
GGAATCGATCCGGAGGCTGCGCACGCGGGTGAGGCGGGACAAGTCTCACCGCGTCCACCACTCGTCTGGCTGACCCTCTC
CCCGTGAACAACGCGGAGAG

Product: carbon monoxide dehydrogenase medium chain

Products: NA

Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIPGPFDYHRPASVGDAIKLLADLGDEARPLAGGHSLLPMMKLRLATPAHLVDLHGIAGLKGICRDGDRIVIGAMTTQAE
LLASAEIGTTLPILHETALLIADPQVRYRGTLGGNVANGDPGNDMPALMLALDASYRLEGPNGAREVAARDFYQGAYFTA
LEPGEILTRVSIPVPPAGHGHAYEKLKRKVGDYATAAAGVVLTMAGGKVATCVIALTNLHETPLLATDAANAVIGTTLDD
AALKAAATAARAIMQPASDARGPAEYRIHVGGIMVMRALQRAASRAK

Sequences:

>Translated_287_residues
MIPGPFDYHRPASVGDAIKLLADLGDEARPLAGGHSLLPMMKLRLATPAHLVDLHGIAGLKGICRDGDRIVIGAMTTQAE
LLASAEIGTTLPILHETALLIADPQVRYRGTLGGNVANGDPGNDMPALMLALDASYRLEGPNGAREVAARDFYQGAYFTA
LEPGEILTRVSIPVPPAGHGHAYEKLKRKVGDYATAAAGVVLTMAGGKVATCVIALTNLHETPLLATDAANAVIGTTLDD
AALKAAATAARAIMQPASDARGPAEYRIHVGGIMVMRALQRAASRAK
>Mature_287_residues
MIPGPFDYHRPASVGDAIKLLADLGDEARPLAGGHSLLPMMKLRLATPAHLVDLHGIAGLKGICRDGDRIVIGAMTTQAE
LLASAEIGTTLPILHETALLIADPQVRYRGTLGGNVANGDPGNDMPALMLALDASYRLEGPNGAREVAARDFYQGAYFTA
LEPGEILTRVSIPVPPAGHGHAYEKLKRKVGDYATAAAGVVLTMAGGKVATCVIALTNLHETPLLATDAANAVIGTTLDD
AALKAAATAARAIMQPASDARGPAEYRIHVGGIMVMRALQRAASRAK

Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789231, Length=283, Percent_Identity=31.095406360424, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 29830; Mature: 29830

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGPFDYHRPASVGDAIKLLADLGDEARPLAGGHSLLPMMKLRLATPAHLVDLHGIAGL
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
KGICRDGDRIVIGAMTTQAELLASAEIGTTLPILHETALLIADPQVRYRGTLGGNVANGD
HHHCCCCCEEEEEEECHHHHHHHHHCCCCCCHHHHHCEEEEECCCEEEEECCCCCCCCCC
PGNDMPALMLALDASYRLEGPNGAREVAARDFYQGAYFTALEPGEILTRVSIPVPPAGHG
CCCCCCCEEEEECCCEEECCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCC
HAYEKLKRKVGDYATAAAGVVLTMAGGKVATCVIALTNLHETPLLATDAANAVIGTTLDD
HHHHHHHHHHHHHHHHHHCEEEEECCCCCEEHHHHHHCCCCCCEEEECCCCCEEECCCHH
AALKAAATAARAIMQPASDARGPAEYRIHVGGIMVMRALQRAASRAK
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPGPFDYHRPASVGDAIKLLADLGDEARPLAGGHSLLPMMKLRLATPAHLVDLHGIAGL
CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCC
KGICRDGDRIVIGAMTTQAELLASAEIGTTLPILHETALLIADPQVRYRGTLGGNVANGD
HHHCCCCCEEEEEEECHHHHHHHHHCCCCCCHHHHHCEEEEECCCEEEEECCCCCCCCCC
PGNDMPALMLALDASYRLEGPNGAREVAARDFYQGAYFTALEPGEILTRVSIPVPPAGHG
CCCCCCCEEEEECCCEEECCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCC
HAYEKLKRKVGDYATAAAGVVLTMAGGKVATCVIALTNLHETPLLATDAANAVIGTTLDD
HHHHHHHHHHHHHHHHHHCEEEEECCCCCEEHHHHHHCCCCCCEEEECCCCCEEECCCHH
AALKAAATAARAIMQPASDARGPAEYRIHVGGIMVMRALQRAASRAK
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721710; 1510563; 2818128; 10430865; 12475995 [H]