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The map label for this gene is coxF [H]

Identifier: 146342846

GI number: 146342846

Start: 6248487

End: 6249302

Strand: Reverse

Name: coxF [H]

Synonym: BRADO6026

Alternate gene names: 146342846

Gene position: 6249302-6248487 (Counterclockwise)

Preceding gene: 146342847

Following gene: 146342838

Centisome position: 83.81

GC content: 69.73

Gene sequence:

>816_bases
ATGACAATGTCCACGGAGATGCTCGACCTCGCCGCGCAGTTGAAAGCCGCCGATGAAAGCTTCGTGCTGGCCACCGTCGT
GCGCACGGTGTCGGTGACGGCCGCCAAAGCGGGGGCCAAGGCGATCATCCGGCCTGACGGGACGATCGTCGCCGGCTGGA
TCGGCGGCGGCTGCGCCCGCGGCGCCGTGCTGAAGGCGGCGCGCGATGCGTTGTCCGACGGCGTGCCGCGGATGGTATCG
GTGCAGCCGGAAAATATTCTCGCCGAGCTTGGCGTCCAGCCCGGGGAGACGAAGGAGGGCGTGCGTTTCGCCGCCAACAT
GTGCCCGAGCAAGGGCACGATGGATATTTTCGTCGAGCCGGTTCTGCCGCATCCCGCGCTGCTGATCCTCGGCGCCAGCC
CGGTGGCGCTGGCACTGGCTGCGCAGGCGCGGCCACTCGGCTATCACGTCACCCTCGCCGCTCCAGCCGCCGATCTCGTC
GCCACGCCGGAGGCGGATCGCCTGATCGACGGCTTCACGCTGGACGGTCTCGCCGGCGGGCGCCGGTTTGTTGTCGTGTC
GACGCAGGGCCGGGGTGACGAGGCCGCATTGCGCGCGGCACTCGGCTGCGAGGCCGCCTACCACGCTTTCGTCGGCAGCC
GCCGCAAGATGGACAGCCTGCGCGACAAGCTCCTCAGGGATGGTATCGATGTCGCGCGGCTCGATCGGGTGAAGGCGCCG
GCAGGGCTCGACCTTGGCGCCATCACGCCGGAAGAGATCGCGATGTCGATCCTCGCCGAGATCACCCTGACGCGGCGGCG
CGGCCAGCGCGGCTGA

Upstream 100 bases:

>100_bases
CGTCGATCTCTACGCGCCCGCGCACACGCTGAATTCGCTCGCGGCGCTGGAGCCGTATCTGGCGAAGTTGTGAGGCCATG
CCGAAAAGAGGAGCTCATCC

Downstream 100 bases:

>100_bases
TCGATGTCACGGTGTCAGCGGCAGATCGAAGGTCACTTTCAGTCCGTCAGCGGCGAAGTCGCGCGTCACCTGGCCCTTCA
GCGCCGCACCGAGAATGCGC

Product: carbon monoxide dehydrogenase CoxF accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTMSTEMLDLAAQLKAADESFVLATVVRTVSVTAAKAGAKAIIRPDGTIVAGWIGGGCARGAVLKAARDALSDGVPRMVS
VQPENILAELGVQPGETKEGVRFAANMCPSKGTMDIFVEPVLPHPALLILGASPVALALAAQARPLGYHVTLAAPAADLV
ATPEADRLIDGFTLDGLAGGRRFVVVSTQGRGDEAALRAALGCEAAYHAFVGSRRKMDSLRDKLLRDGIDVARLDRVKAP
AGLDLGAITPEEIAMSILAEITLTRRRGQRG

Sequences:

>Translated_271_residues
MTMSTEMLDLAAQLKAADESFVLATVVRTVSVTAAKAGAKAIIRPDGTIVAGWIGGGCARGAVLKAARDALSDGVPRMVS
VQPENILAELGVQPGETKEGVRFAANMCPSKGTMDIFVEPVLPHPALLILGASPVALALAAQARPLGYHVTLAAPAADLV
ATPEADRLIDGFTLDGLAGGRRFVVVSTQGRGDEAALRAALGCEAAYHAFVGSRRKMDSLRDKLLRDGIDVARLDRVKAP
AGLDLGAITPEEIAMSILAEITLTRRRGQRG
>Mature_270_residues
TMSTEMLDLAAQLKAADESFVLATVVRTVSVTAAKAGAKAIIRPDGTIVAGWIGGGCARGAVLKAARDALSDGVPRMVSV
QPENILAELGVQPGETKEGVRFAANMCPSKGTMDIFVEPVLPHPALLILGASPVALALAAQARPLGYHVTLAAPAADLVA
TPEADRLIDGFTLDGLAGGRRFVVVSTQGRGDEAALRAALGCEAAYHAFVGSRRKMDSLRDKLLRDGIDVARLDRVKAPA
GLDLGAITPEEIAMSILAEITLTRRRGQRG

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=273, Percent_Identity=26.7399267399267, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 28196; Mature: 28065

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSTEMLDLAAQLKAADESFVLATVVRTVSVTAAKAGAKAIIRPDGTIVAGWIGGGCAR
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCHHH
GAVLKAARDALSDGVPRMVSVQPENILAELGVQPGETKEGVRFAANMCPSKGTMDIFVEP
HHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEC
VLPHPALLILGASPVALALAAQARPLGYHVTLAAPAADLVATPEADRLIDGFTLDGLAGG
CCCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCCHHHEECCCHHHHHCCEEECCCCCC
RRFVVVSTQGRGDEAALRAALGCEAAYHAFVGSRRKMDSLRDKLLRDGIDVARLDRVKAP
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
AGLDLGAITPEEIAMSILAEITLTRRRGQRG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TMSTEMLDLAAQLKAADESFVLATVVRTVSVTAAKAGAKAIIRPDGTIVAGWIGGGCAR
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCHHH
GAVLKAARDALSDGVPRMVSVQPENILAELGVQPGETKEGVRFAANMCPSKGTMDIFVEP
HHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEC
VLPHPALLILGASPVALALAAQARPLGYHVTLAAPAADLVATPEADRLIDGFTLDGLAGG
CCCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCCHHHEECCCHHHHHCCEEECCCCCC
RRFVVVSTQGRGDEAALRAALGCEAAYHAFVGSRRKMDSLRDKLLRDGIDVARLDRVKAP
CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
AGLDLGAITPEEIAMSILAEITLTRRRGQRG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]