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The map label for this gene is ydeM [H]

Identifier: 146342831

GI number: 146342831

Start: 6236592

End: 6237098

Strand: Direct

Name: ydeM [H]

Synonym: BRADO6010

Alternate gene names: 146342831

Gene position: 6236592-6237098 (Clockwise)

Preceding gene: 146342829

Following gene: 146342832

Centisome position: 83.64

GC content: 64.69

Gene sequence:

>507_bases
GTGATTGCTGCAAAGTGCGGCCACAATCAGGCTTCTTTCAGCCATTCCGATCCCATGACCCTCACCTTCGAAGATTTTCC
CCCCGGCCCTTTCGGCAGCTTCGGCCCGCGCCACGTCACCCGCGACGAGATCATCGCATTCGCGTCCGAGTTCGATCCGC
AGCCCATGCATGTCGATGAAGACGCCGCCAAACAGTCGATGCTCCGGGGCCTCTCAGGCTCCGGCTGGCACCTCTGCTCG
GTGATGATGCGAATGATGTTCGATGGCTTCATCGGCCGCACCGCTTCGCTCGGCTCGCCCGGTGTCAACGAGGTGCGCTG
GCTGTCGCCGCTGCGGCCCGATGACGCGCTGATGCTCGATGTCGAGGTGGTGGAGGCGCGCGTGTCGCGGAGCCGGCCGG
CGACGGGGATCGTTACGTTCAAATGCAGCGTGCGCAATGCGGCTGGCGAGAAGCTCTGCGAGATGGTGTCGCCGATCATC
GTCGAGCGGCGTGGGGAGGCGGGCTGA

Upstream 100 bases:

>100_bases
CAGACGACATCACCGGCGGCAGCCATCGATCGCGGTATGCGGCGCCTTCTGGCGCTCTCGTGCGACCGGATCGGACGTCA
GCCATGCGAGCGGTCTGGTT

Downstream 100 bases:

>100_bases
TGCGCTTCTTCGAGGATCTTCAGGTCGGCCAGCGCCGCGAGCTCGGCGCCTACACGTTCACGGCTGAGGAGATCAAACGC
TTCGCCGCGCAGTTCGATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MIAAKCGHNQASFSHSDPMTLTFEDFPPGPFGSFGPRHVTRDEIIAFASEFDPQPMHVDEDAAKQSMLRGLSGSGWHLCS
VMMRMMFDGFIGRTASLGSPGVNEVRWLSPLRPDDALMLDVEVVEARVSRSRPATGIVTFKCSVRNAAGEKLCEMVSPII
VERRGEAG

Sequences:

>Translated_168_residues
MIAAKCGHNQASFSHSDPMTLTFEDFPPGPFGSFGPRHVTRDEIIAFASEFDPQPMHVDEDAAKQSMLRGLSGSGWHLCS
VMMRMMFDGFIGRTASLGSPGVNEVRWLSPLRPDDALMLDVEVVEARVSRSRPATGIVTFKCSVRNAAGEKLCEMVSPII
VERRGEAG
>Mature_168_residues
MIAAKCGHNQASFSHSDPMTLTFEDFPPGPFGSFGPRHVTRDEIIAFASEFDPQPMHVDEDAAKQSMLRGLSGSGWHLCS
VMMRMMFDGFIGRTASLGSPGVNEVRWLSPLRPDDALMLDVEVVEARVSRSRPATGIVTFKCSVRNAAGEKLCEMVSPII
VERRGEAG

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 18342; Mature: 18342

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAAKCGHNQASFSHSDPMTLTFEDFPPGPFGSFGPRHVTRDEIIAFASEFDPQPMHVDE
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCH
DAAKQSMLRGLSGSGWHLCSVMMRMMFDGFIGRTASLGSPGVNEVRWLSPLRPDDALMLD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEH
VEVVEARVSRSRPATGIVTFKCSVRNAAGEKLCEMVSPIIVERRGEAG
HHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIAAKCGHNQASFSHSDPMTLTFEDFPPGPFGSFGPRHVTRDEIIAFASEFDPQPMHVDE
CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCH
DAAKQSMLRGLSGSGWHLCSVMMRMMFDGFIGRTASLGSPGVNEVRWLSPLRPDDALMLD
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEH
VEVVEARVSRSRPATGIVTFKCSVRNAAGEKLCEMVSPIIVERRGEAG
HHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]