Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342804
Identifier: 146342804
GI number: 146342804
Start: 6212416
End: 6213639
Strand: Reverse
Name: 146342804
Synonym: BRADO5981
Alternate gene names: NA
Gene position: 6213639-6212416 (Counterclockwise)
Preceding gene: 146342805
Following gene: 146342803
Centisome position: 83.33
GC content: 71.0
Gene sequence:
>1224_bases ATGATGATGGATCCGATGAGGACGCGGCTACTGACCTCGCGACGTCATCTGCTGCTGGCCGGCGCATCCTTCGCCGCATG GGGCTACGTGCCGAAATTCGCGCGCGCGGCCGACCAGCGCGATCCGCGGCTGATCGTCGTCATCCTGCGCGGCGCGCTCG ACGGGCTCGCCACTGTCGCGCCGGTCGGCGATCCGGATTACGCCGGGCTGCACGGCGCCATCGCGCTCACCACGGCTGGG CCGAATGCGGCGCTGCCGCTCGATTCGTTCTTCGCGCTGCATCCGGCGATGCCGGAATTCGCGCGGATGGTTCGCGACAA GCAGGCGGCTGTCCTCCATGCGGTCGCGACGCCGTATCGCGAGCGCTCGCATTTCGACGGGCAGGACGTGCTGGAAAGCG GATTTGCCGGGCCGGGGCGCGTGCAATCCGGCTGGCTCAACCGTGCGCTCGAAGTGCTGCCGCGCGGGCCGCGCGTCGCC GGCGCGCTCGCGGTCGGTCCGACCGCGCCGCTGGTGCTGCGTGGCGCGGCGCCCACCGTGGGCTGGGCGCCAGTGACCTT GCCGCAGGCCGACGACGAGACGGCAATGCGGCTGGTCGATCTCTACACGCATCGCGATCCCGCGCTCGCCGCGGCGCTGT CGCAAGGGTTGAAGCTGGAGAAGGTCGCATTCGGCGACGACATGAAGCCGAAGCCCGGCGGCAACCAGATCGCGGCGATG CGCCAGGTGGCGCGCGGCGCGGCCAAGCTGATGGCAGCCGATGACGGTCCGCGGATCGCGGCGCTGGCGTTCGATGGCTG GGACACGCATGCCAATGAAGGCGGCGCGGTCGGCCGGCTGGCGCAGCCGCTGTCGGGCCTCGACGGCGCGCTGGCCGAAT TCGAGAGCGGGCTCGGTCCGCGCTGGCGCGACACCGTGATCGTGGTCGCCACCGAGTTCGGACGCACCGCCAGGATCAAC GGCACGCAGGGCACCGATCACGGCACCGGAACGATCGCGCTGCTCGCGGGCGGCGCGGTGAAGGGCGGACGCGTGATCGC CGATTGGCCCTCGCTCAGGACGGCGAGCCTCTATCAGGGCCGCGATCTCGCGCCGACCACCGATCTGCGCGCGGTCTTCA AGGGCGTGCTCGCCGATCATCTCGGCCTGAGCGAACGCGCCCTCGGCGAGACGGTGTTTCCCGAGAGCGCAGCCGTGAAG CCGATGAAGGGGCTGATAGCCTAG
Upstream 100 bases:
>100_bases GCGATGCCAGCTCGACCGAGACACGTCGCACCATCGAGCGCGCGGAATCACGCCAGCAGGCGCTGGCACTGCTGATGATG TCACCTGAATTCCAGAGGAG
Downstream 100 bases:
>100_bases CCGCCTTTGCTCTGCATTCGGCTGCCGCCAAAGGCTCGTGACATCGCCGCACCCGCGACGATGTCTTGAAGCGCATCGCG GCCCGAAGTCTGCTATTCCT
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MMMDPMRTRLLTSRRHLLLAGASFAAWGYVPKFARAADQRDPRLIVVILRGALDGLATVAPVGDPDYAGLHGAIALTTAG PNAALPLDSFFALHPAMPEFARMVRDKQAAVLHAVATPYRERSHFDGQDVLESGFAGPGRVQSGWLNRALEVLPRGPRVA GALAVGPTAPLVLRGAAPTVGWAPVTLPQADDETAMRLVDLYTHRDPALAAALSQGLKLEKVAFGDDMKPKPGGNQIAAM RQVARGAAKLMAADDGPRIAALAFDGWDTHANEGGAVGRLAQPLSGLDGALAEFESGLGPRWRDTVIVVATEFGRTARIN GTQGTDHGTGTIALLAGGAVKGGRVIADWPSLRTASLYQGRDLAPTTDLRAVFKGVLADHLGLSERALGETVFPESAAVK PMKGLIA
Sequences:
>Translated_407_residues MMMDPMRTRLLTSRRHLLLAGASFAAWGYVPKFARAADQRDPRLIVVILRGALDGLATVAPVGDPDYAGLHGAIALTTAG PNAALPLDSFFALHPAMPEFARMVRDKQAAVLHAVATPYRERSHFDGQDVLESGFAGPGRVQSGWLNRALEVLPRGPRVA GALAVGPTAPLVLRGAAPTVGWAPVTLPQADDETAMRLVDLYTHRDPALAAALSQGLKLEKVAFGDDMKPKPGGNQIAAM RQVARGAAKLMAADDGPRIAALAFDGWDTHANEGGAVGRLAQPLSGLDGALAEFESGLGPRWRDTVIVVATEFGRTARIN GTQGTDHGTGTIALLAGGAVKGGRVIADWPSLRTASLYQGRDLAPTTDLRAVFKGVLADHLGLSERALGETVFPESAAVK PMKGLIA >Mature_407_residues MMMDPMRTRLLTSRRHLLLAGASFAAWGYVPKFARAADQRDPRLIVVILRGALDGLATVAPVGDPDYAGLHGAIALTTAG PNAALPLDSFFALHPAMPEFARMVRDKQAAVLHAVATPYRERSHFDGQDVLESGFAGPGRVQSGWLNRALEVLPRGPRVA GALAVGPTAPLVLRGAAPTVGWAPVTLPQADDETAMRLVDLYTHRDPALAAALSQGLKLEKVAFGDDMKPKPGGNQIAAM RQVARGAAKLMAADDGPRIAALAFDGWDTHANEGGAVGRLAQPLSGLDGALAEFESGLGPRWRDTVIVVATEFGRTARIN GTQGTDHGTGTIALLAGGAVKGGRVIADWPSLRTASLYQGRDLAPTTDLRAVFKGVLADHLGLSERALGETVFPESAAVK PMKGLIA
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42675; Mature: 42675
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMDPMRTRLLTSRRHLLLAGASFAAWGYVPKFARAADQRDPRLIVVILRGALDGLATVA CCCCHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHCC PVGDPDYAGLHGAIALTTAGPNAALPLDSFFALHPAMPEFARMVRDKQAAVLHAVATPYR CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH ERSHFDGQDVLESGFAGPGRVQSGWLNRALEVLPRGPRVAGALAVGPTAPLVLRGAAPTV HHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCC GWAPVTLPQADDETAMRLVDLYTHRDPALAAALSQGLKLEKVAFGDDMKPKPGGNQIAAM CCCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHH RQVARGAAKLMAADDGPRIAALAFDGWDTHANEGGAVGRLAQPLSGLDGALAEFESGLGP HHHHHHHHHEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCC RWRDTVIVVATEFGRTARINGTQGTDHGTGTIALLAGGAVKGGRVIADWPSLRTASLYQG CCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHCCC RDLAPTTDLRAVFKGVLADHLGLSERALGETVFPESAAVKPMKGLIA CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MMMDPMRTRLLTSRRHLLLAGASFAAWGYVPKFARAADQRDPRLIVVILRGALDGLATVA CCCCHHHHHHHHCCCEEEEECCCHHHHCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHCC PVGDPDYAGLHGAIALTTAGPNAALPLDSFFALHPAMPEFARMVRDKQAAVLHAVATPYR CCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH ERSHFDGQDVLESGFAGPGRVQSGWLNRALEVLPRGPRVAGALAVGPTAPLVLRGAAPTV HHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCCCC GWAPVTLPQADDETAMRLVDLYTHRDPALAAALSQGLKLEKVAFGDDMKPKPGGNQIAAM CCCEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHH RQVARGAAKLMAADDGPRIAALAFDGWDTHANEGGAVGRLAQPLSGLDGALAEFESGLGP HHHHHHHHHEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCC RWRDTVIVVATEFGRTARINGTQGTDHGTGTIALLAGGAVKGGRVIADWPSLRTASLYQG CCCCEEEEEEECCCCEEEECCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHCCC RDLAPTTDLRAVFKGVLADHLGLSERALGETVFPESAAVKPMKGLIA CCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA