Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342805
Identifier: 146342805
GI number: 146342805
Start: 6213636
End: 6215150
Strand: Reverse
Name: 146342805
Synonym: BRADO5982
Alternate gene names: NA
Gene position: 6215150-6213636 (Counterclockwise)
Preceding gene: 146342810
Following gene: 146342804
Centisome position: 83.35
GC content: 68.38
Gene sequence:
>1515_bases ATGGCGCGTGATCCGAAGGCCGCACTCGTCGCCTTGAACCGCTTCGGCTTCGGCGCGCGGGGCGGGGCATCTGGCGATCT CGTCAATGCGGCGGCGGATCCGCGCGGCTTCGTCAAGGCCGAGCTCGCGCGGCCCACGGGCGCGCTGCTCGAGGTGCCGG GCCTGCAGGGCACGCCTGCGCTCGCTGACGCGGTCTTCGCGTATCAAGACGAGGTGAAGAGGGCGCGCGAAGCCGCGGCG AAAGCCGAGCCGCCGCCGGAGCCGCCCGGCCAGACGCGCGGCCTATCGATGAACGGCGCCGATCCGCAGATGGCGGCGCC TCCGGCCAACGGCACAACGGCAGCCACCGAGCCGGCGATGCAGGCTGTACCCACGAAGCCGGCGCAGCCGCAGCAACCTC CCAACGTTGTCCAGAAGACGTTCCGCGCCGAGGCGCTGGCGCGAGTGCAGCGCGCGGTGCTTGCGGATTGCGGCGTCACC GAGCGTCTGGTGGCGTTCTGGTCGAACCATTTCTGCATCTCCGCCGGCAAGGGCGAGCTGGCGCGGATGTGGGCCGGCGC ATTCGAGCGCGAGGCGATCCGACCGCACGTGCTGGGGCGTTTCGCCGATATGCTCAAGGCGGTGGAGCAGCATCCGGCGA TGCTGTTCTTTCTCGACAATCAGGAATCGCTCGGCCCGGATTCGCGCGCCGGCCAGAGCCGCAAGCGCGGCCTCAACGAA AACCTCGCGCGCGAGATCATGGAGCTGCATACCCTCGGAGTCGGCGGCGGCTATACGCACGAGGACGTGACGTCGCTCGC CCGCATCATCACCGGCTGGAGCTTCGCCGGACGCAATGCGCGCAACGGCGCGCCGGGCAGCTTCGTGTTCAATGCCAATG CGCACCAGCCGGGGCCGCAGACCTTGCTCGGCAAGATCTATCAGGACGATGGTCTGGCGCAGGGCGAAGCCGCGCTCGCC GACATCGCGCGCCATCCCTCGACCGCCAAGTTCATCGCCACCAAGCTCACGCGCCATTTCGTCGCCGACGATCCGCCGCC GGCTCTGGTGGCGCGGCTCGAGGCCGTCTTCAAGAAGACCGACGGCGACCTGAAGGCGGTGACGTCGACGCTCGTCGAGT CCGACGAGGCTTGGTCGGCGCCACTGACCAAGATCCGCTCGCCCTATGAGTTCCTGATCGCCGGCGGCCGATTGCTGGCG CGTGTCCCCGACGATCCCGGCTTCTATCTCAATTCTCTCAACACGCTCGGCCAGCCCTTGTGGGCGCCCGCCGGACCGAA CGGATTCGGCGACAGCAATGCGATGTGGGCCGCGCCGGAAGGCATGAAGCTGCGGCTCGACATCTCCTCCCAGCTCGGCG CGCGCCTCGGTAACAATCTCGATCCGCGCGAGCTGCTCGAACTCGTCGCGGGCGATGCCAGCTCGACCGAGACACGTCGC ACCATCGAGCGCGCGGAATCACGCCAGCAGGCGCTGGCACTGCTGATGATGTCACCTGAATTCCAGAGGAGATGA
Upstream 100 bases:
>100_bases ACGAAGAAGTATAGTGCGCAGCAGGAGCCTGCGCCAGCGCAGCGGTATCGAGCTGCTCGTGAACCTGGCGCACCGACCCG GGACCTGATGAGGATTTGGC
Downstream 100 bases:
>100_bases TGATGGATCCGATGAGGACGCGGCTACTGACCTCGCGACGTCATCTGCTGCTGGCCGGCGCATCCTTCGCCGCATGGGGC TACGTGCCGAAATTCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MARDPKAALVALNRFGFGARGGASGDLVNAAADPRGFVKAELARPTGALLEVPGLQGTPALADAVFAYQDEVKRAREAAA KAEPPPEPPGQTRGLSMNGADPQMAAPPANGTTAATEPAMQAVPTKPAQPQQPPNVVQKTFRAEALARVQRAVLADCGVT ERLVAFWSNHFCISAGKGELARMWAGAFEREAIRPHVLGRFADMLKAVEQHPAMLFFLDNQESLGPDSRAGQSRKRGLNE NLAREIMELHTLGVGGGYTHEDVTSLARIITGWSFAGRNARNGAPGSFVFNANAHQPGPQTLLGKIYQDDGLAQGEAALA DIARHPSTAKFIATKLTRHFVADDPPPALVARLEAVFKKTDGDLKAVTSTLVESDEAWSAPLTKIRSPYEFLIAGGRLLA RVPDDPGFYLNSLNTLGQPLWAPAGPNGFGDSNAMWAAPEGMKLRLDISSQLGARLGNNLDPRELLELVAGDASSTETRR TIERAESRQQALALLMMSPEFQRR
Sequences:
>Translated_504_residues MARDPKAALVALNRFGFGARGGASGDLVNAAADPRGFVKAELARPTGALLEVPGLQGTPALADAVFAYQDEVKRAREAAA KAEPPPEPPGQTRGLSMNGADPQMAAPPANGTTAATEPAMQAVPTKPAQPQQPPNVVQKTFRAEALARVQRAVLADCGVT ERLVAFWSNHFCISAGKGELARMWAGAFEREAIRPHVLGRFADMLKAVEQHPAMLFFLDNQESLGPDSRAGQSRKRGLNE NLAREIMELHTLGVGGGYTHEDVTSLARIITGWSFAGRNARNGAPGSFVFNANAHQPGPQTLLGKIYQDDGLAQGEAALA DIARHPSTAKFIATKLTRHFVADDPPPALVARLEAVFKKTDGDLKAVTSTLVESDEAWSAPLTKIRSPYEFLIAGGRLLA RVPDDPGFYLNSLNTLGQPLWAPAGPNGFGDSNAMWAAPEGMKLRLDISSQLGARLGNNLDPRELLELVAGDASSTETRR TIERAESRQQALALLMMSPEFQRR >Mature_503_residues ARDPKAALVALNRFGFGARGGASGDLVNAAADPRGFVKAELARPTGALLEVPGLQGTPALADAVFAYQDEVKRAREAAAK AEPPPEPPGQTRGLSMNGADPQMAAPPANGTTAATEPAMQAVPTKPAQPQQPPNVVQKTFRAEALARVQRAVLADCGVTE RLVAFWSNHFCISAGKGELARMWAGAFEREAIRPHVLGRFADMLKAVEQHPAMLFFLDNQESLGPDSRAGQSRKRGLNEN LAREIMELHTLGVGGGYTHEDVTSLARIITGWSFAGRNARNGAPGSFVFNANAHQPGPQTLLGKIYQDDGLAQGEAALAD IARHPSTAKFIATKLTRHFVADDPPPALVARLEAVFKKTDGDLKAVTSTLVESDEAWSAPLTKIRSPYEFLIAGGRLLAR VPDDPGFYLNSLNTLGQPLWAPAGPNGFGDSNAMWAAPEGMKLRLDISSQLGARLGNNLDPRELLELVAGDASSTETRRT IERAESRQQALALLMMSPEFQRR
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53880; Mature: 53748
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARDPKAALVALNRFGFGARGGASGDLVNAAADPRGFVKAELARPTGALLEVPGLQGTPA CCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHCCCCCCEEECCCCCCCHH LADAVFAYQDEVKRAREAAAKAEPPPEPPGQTRGLSMNGADPQMAAPPANGTTAATEPAM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH QAVPTKPAQPQQPPNVVQKTFRAEALARVQRAVLADCGVTERLVAFWSNHFCISAGKGEL HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCHH ARMWAGAFEREAIRPHVLGRFADMLKAVEQHPAMLFFLDNQESLGPDSRAGQSRKRGLNE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHCCCCH NLAREIMELHTLGVGGGYTHEDVTSLARIITGWSFAGRNARNGAPGSFVFNANAHQPGPQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHH TLLGKIYQDDGLAQGEAALADIARHPSTAKFIATKLTRHFVADDPPPALVARLEAVFKKT HHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC DGDLKAVTSTLVESDEAWSAPLTKIRSPYEFLIAGGRLLARVPDDPGFYLNSLNTLGQPL CCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCC WAPAGPNGFGDSNAMWAAPEGMKLRLDISSQLGARLGNNLDPRELLELVAGDASSTETRR CCCCCCCCCCCCCCEEECCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHH TIERAESRQQALALLMMSPEFQRR HHHHHHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure ARDPKAALVALNRFGFGARGGASGDLVNAAADPRGFVKAELARPTGALLEVPGLQGTPA CCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHHHHHCCCCCCEEECCCCCCCHH LADAVFAYQDEVKRAREAAAKAEPPPEPPGQTRGLSMNGADPQMAAPPANGTTAATEPAM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH QAVPTKPAQPQQPPNVVQKTFRAEALARVQRAVLADCGVTERLVAFWSNHFCISAGKGEL HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCHH ARMWAGAFEREAIRPHVLGRFADMLKAVEQHPAMLFFLDNQESLGPDSRAGQSRKRGLNE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHCCCCH NLAREIMELHTLGVGGGYTHEDVTSLARIITGWSFAGRNARNGAPGSFVFNANAHQPGPQ HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHH TLLGKIYQDDGLAQGEAALADIARHPSTAKFIATKLTRHFVADDPPPALVARLEAVFKKT HHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC DGDLKAVTSTLVESDEAWSAPLTKIRSPYEFLIAGGRLLARVPDDPGFYLNSLNTLGQPL CCHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCC WAPAGPNGFGDSNAMWAAPEGMKLRLDISSQLGARLGNNLDPRELLELVAGDASSTETRR CCCCCCCCCCCCCCEEECCCCCEEEEECHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHH TIERAESRQQALALLMMSPEFQRR HHHHHHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA