| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342779
Identifier: 146342779
GI number: 146342779
Start: 6176535
End: 6177335
Strand: Reverse
Name: 146342779
Synonym: BRADO5954
Alternate gene names: NA
Gene position: 6177335-6176535 (Counterclockwise)
Preceding gene: 146342780
Following gene: 146342778
Centisome position: 82.84
GC content: 62.8
Gene sequence:
>801_bases GTGTGCGGCATGGTCTCGGTGGCCCAGGCCGCCGATTTGTCCGATCTGCCCATCCTGAGAGGCAGCATGACCGAAGGCCT CAACAGCTCACGAGTCAACTGGGACGGCTACTATGCCGGCGTCCAGGGCGGCTATGGATCGTCCGACGAGAACTTCAACG GCTCGACGAGCACGATGACGGCGGCCGTGCTGGCGAATACGTTGATCGAGAGCCAGATGCAGGTGTCCTCCTGGAACATG AATCTTGGCAAGCAATCCTCGCGTTCGTCGGGTTTTGGCGGCTTCGTCGGCTATAACAGCCAGTGGGATGACGTGGTGCT CGGCGTCGAGGCGAGCTATCTGCACGGCAAATTCGGCGGCATGACCTCGTCGACCCGCGCGCTCGTCAGCGGCACCGCGC TCACCGACGGCAACTACCACAGCGTGACGTCGACGCAGTCGTCGCAGATCTCGATCAAGGATATGGCAACCATTCGCGGC CGCGCCGGCTACGCGCTGGGATGCTTCCTGCCCTACGCGTTCTTCGGCCTCGCGCTCGGCAACGCCGACATCGGCCAGAC CGTGACGGTTCAGGACTCGGTGAGCGCGACGCAGCTCGGCGCCTATACGGCCCTGCAGCCACTCAGCGCCAACAATATCC AGCACAATCATCTGATCTATGGCTATAGCGCGGGCCTTGGCGTCGATGTCAATCTGGTCGGCGGCCTATTCGCCCGTGCG GAGTACGAGTACATCCGCTTCACGTCGACCGTCGACACCAGCGTGAACACGGTGCGGGCCGGCCTCGGCTACAAGTTCTA A
Upstream 100 bases:
>100_bases CGTGACAACGAATGATTAAGGTTAACGCGCGATGATCGCTTCCATGGAGTTCAGTACTGATTGGAGCGTGGCAATGCGTA GCCTGGTGGTGGTGGTTTCG
Downstream 100 bases:
>100_bases TCGGGCCACTCGGAACGATGGCCGACGCGATGCCGATCACCATCCGGCCGGCGCGGCGCGACGATGTCGGCAGCATCGTC GCCATGCTCGCCGACGATCA
Product: putative outer membrane protein (OMPA-like), hemin-binding protein
Products: NA
Alternate protein names: Outer-Membrane Immunogenic Protein
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MCGMVSVAQAADLSDLPILRGSMTEGLNSSRVNWDGYYAGVQGGYGSSDENFNGSTSTMTAAVLANTLIESQMQVSSWNM NLGKQSSRSSGFGGFVGYNSQWDDVVLGVEASYLHGKFGGMTSSTRALVSGTALTDGNYHSVTSTQSSQISIKDMATIRG RAGYALGCFLPYAFFGLALGNADIGQTVTVQDSVSATQLGAYTALQPLSANNIQHNHLIYGYSAGLGVDVNLVGGLFARA EYEYIRFTSTVDTSVNTVRAGLGYKF
Sequences:
>Translated_266_residues MCGMVSVAQAADLSDLPILRGSMTEGLNSSRVNWDGYYAGVQGGYGSSDENFNGSTSTMTAAVLANTLIESQMQVSSWNM NLGKQSSRSSGFGGFVGYNSQWDDVVLGVEASYLHGKFGGMTSSTRALVSGTALTDGNYHSVTSTQSSQISIKDMATIRG RAGYALGCFLPYAFFGLALGNADIGQTVTVQDSVSATQLGAYTALQPLSANNIQHNHLIYGYSAGLGVDVNLVGGLFARA EYEYIRFTSTVDTSVNTVRAGLGYKF >Mature_266_residues MCGMVSVAQAADLSDLPILRGSMTEGLNSSRVNWDGYYAGVQGGYGSSDENFNGSTSTMTAAVLANTLIESQMQVSSWNM NLGKQSSRSSGFGGFVGYNSQWDDVVLGVEASYLHGKFGGMTSSTRALVSGTALTDGNYHSVTSTQSSQISIKDMATIRG RAGYALGCFLPYAFFGLALGNADIGQTVTVQDSVSATQLGAYTALQPLSANNIQHNHLIYGYSAGLGVDVNLVGGLFARA EYEYIRFTSTVDTSVNTVRAGLGYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28037; Mature: 28037
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGMVSVAQAADLSDLPILRGSMTEGLNSSRVNWDGYYAGVQGGYGSSDENFNGSTSTMT CCCCCCHHHHCCCCCCCEECCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHH AAVLANTLIESQMQVSSWNMNLGKQSSRSSGFGGFVGYNSQWDDVVLGVEASYLHGKFGG HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEEECCCCC MTSSTRALVSGTALTDGNYHSVTSTQSSQISIKDMATIRGRAGYALGCFLPYAFFGLALG CCCCCCEEEECEEEECCCCEEEECCCCCEEEHHHHHHHCCCCCEEHHHHHHHHHHHHHCC NADIGQTVTVQDSVSATQLGAYTALQPLSANNIQHNHLIYGYSAGLGVDVNLVGGLFARA CCCCCCEEEEECCCCHHHHCHHHHCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHC EYEYIRFTSTVDTSVNTVRAGLGYKF CEEEEEEEEECCCCHHHHHCCCCCCC >Mature Secondary Structure MCGMVSVAQAADLSDLPILRGSMTEGLNSSRVNWDGYYAGVQGGYGSSDENFNGSTSTMT CCCCCCHHHHCCCCCCCEECCHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHH AAVLANTLIESQMQVSSWNMNLGKQSSRSSGFGGFVGYNSQWDDVVLGVEASYLHGKFGG HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHEEECCCCC MTSSTRALVSGTALTDGNYHSVTSTQSSQISIKDMATIRGRAGYALGCFLPYAFFGLALG CCCCCCEEEECEEEECCCCEEEECCCCCEEEHHHHHHHCCCCCEEHHHHHHHHHHHHHCC NADIGQTVTVQDSVSATQLGAYTALQPLSANNIQHNHLIYGYSAGLGVDVNLVGGLFARA CCCCCCEEEEECCCCHHHHCHHHHCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHC EYEYIRFTSTVDTSVNTVRAGLGYKF CEEEEEEEEECCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA