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The map label for this gene is 146342780

Identifier: 146342780

GI number: 146342780

Start: 6177556

End: 6178326

Strand: Reverse

Name: 146342780

Synonym: BRADO5955

Alternate gene names: NA

Gene position: 6178326-6177556 (Counterclockwise)

Preceding gene: 146342781

Following gene: 146342779

Centisome position: 82.86

GC content: 63.68

Gene sequence:

>771_bases
ATGCCCATCGCGCCCCCGCCCGTCTACGCGCCGCCGCCGGCGGCTGATTTCGGCGGCTGGTACCTGCGCGGGGACATCGG
GTTCAGCAATCAGAAGGTCAAAGACGTTCACTATACGCGCGAGTCGGCCTATACGCCGATGACCTCGTTTCAGCAGACCT
CCGACTTCGACGCAGCCGGCATCTACGGCGTCGGCGTCGGCTATCGTTTCAACAGCTGGTTCCGCGCCGACATCACCGGG
CAGTATCGCGGCAATTCGAACTTCAAGGCCACCGACCGCTTCAATGCGACCGCGGGTGGCGTGCCCTACAGCGGCATCGA
CAACTACACGGCTAGCAAGTCCGAATGGCTCGTGCTGGCCAATGCCTATGTCGACCTCGGCACATGGTGGTGCGTGACCC
CGTTCATCGGCGCCGGCGTCGGCGGCTCGCGCGTGACGATCTCCAACTTCACCGACACCGGCATCAACAACCTGCCGTTC
ACGACCGCGAGCTTCGCGACCGCGCCGACGTCCTCGAAGTGGAATTTCGCCTGGGCGGCGCATGCGGGTCTCGCCTACAA
CGTCAACCCGAACCTCGTGCTCGAGCTGGCCTACAGCTATGTCGATCTCGGGCAGGGACAGACCGGCGTGCTGTCGACCT
ACACCGGAACGACAACCGGCAACTTCTTCAAGTTCAAGGACATCACCTCGCACGACCTGAAGCTCGGCGTGCGCTGGAAT
TTCGACAATCCTCCGCCGCCTCCGATGCCGCCGCTGATCCGCAAGGGCTGA

Upstream 100 bases:

>100_bases
CGCCTCACCGGCCAAAGGGACGAAGCCAATGCGTAGCGTTAAGTCTTTGATCGCCGCCGGAGCGGCCTCTATGTTTTCAA
CCTTGGCCTTTGCGGCCGAC

Downstream 100 bases:

>100_bases
AGCTTCTGGCGATACTGATCGCATCAACAAGGCAAAACGGCGCGGACGTCCGCGCCGTTTTTGCGTTTGGTCCGCGAGAG
GACTCGCGCGCTTTGGCAAA

Product: putative outer surface protein (OMPA-like) heat-resistant agglutinin 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPIAPPPVYAPPPAADFGGWYLRGDIGFSNQKVKDVHYTRESAYTPMTSFQQTSDFDAAGIYGVGVGYRFNSWFRADITG
QYRGNSNFKATDRFNATAGGVPYSGIDNYTASKSEWLVLANAYVDLGTWWCVTPFIGAGVGGSRVTISNFTDTGINNLPF
TTASFATAPTSSKWNFAWAAHAGLAYNVNPNLVLELAYSYVDLGQGQTGVLSTYTGTTTGNFFKFKDITSHDLKLGVRWN
FDNPPPPPMPPLIRKG

Sequences:

>Translated_256_residues
MPIAPPPVYAPPPAADFGGWYLRGDIGFSNQKVKDVHYTRESAYTPMTSFQQTSDFDAAGIYGVGVGYRFNSWFRADITG
QYRGNSNFKATDRFNATAGGVPYSGIDNYTASKSEWLVLANAYVDLGTWWCVTPFIGAGVGGSRVTISNFTDTGINNLPF
TTASFATAPTSSKWNFAWAAHAGLAYNVNPNLVLELAYSYVDLGQGQTGVLSTYTGTTTGNFFKFKDITSHDLKLGVRWN
FDNPPPPPMPPLIRKG
>Mature_255_residues
PIAPPPVYAPPPAADFGGWYLRGDIGFSNQKVKDVHYTRESAYTPMTSFQQTSDFDAAGIYGVGVGYRFNSWFRADITGQ
YRGNSNFKATDRFNATAGGVPYSGIDNYTASKSEWLVLANAYVDLGTWWCVTPFIGAGVGGSRVTISNFTDTGINNLPFT
TASFATAPTSSKWNFAWAAHAGLAYNVNPNLVLELAYSYVDLGQGQTGVLSTYTGTTTGNFFKFKDITSHDLKLGVRWNF
DNPPPPPMPPLIRKG

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen msp4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR002566 [H]

Pfam domain/function: PF01617 Surface_Ag_2 [H]

EC number: NA

Molecular weight: Translated: 27866; Mature: 27735

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAPPPVYAPPPAADFGGWYLRGDIGFSNQKVKDVHYTRESAYTPMTSFQQTSDFDAAG
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECHHHCCCCCCCCCCCCCCCCCC
IYGVGVGYRFNSWFRADITGQYRGNSNFKATDRFNATAGGVPYSGIDNYTASKSEWLVLA
EEEEEECEEECCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
NAYVDLGTWWCVTPFIGAGVGGSRVTISNFTDTGINNLPFTTASFATAPTSSKWNFAWAA
EEEEECCCCEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEE
HAGLAYNVNPNLVLELAYSYVDLGQGQTGVLSTYTGTTTGNFFKFKDITSHDLKLGVRWN
CCCEEEECCCCEEEEEEEHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEEC
FDNPPPPPMPPLIRKG
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIAPPPVYAPPPAADFGGWYLRGDIGFSNQKVKDVHYTRESAYTPMTSFQQTSDFDAAG
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECHHHCCCCCCCCCCCCCCCCCC
IYGVGVGYRFNSWFRADITGQYRGNSNFKATDRFNATAGGVPYSGIDNYTASKSEWLVLA
EEEEEECEEECCEEEEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
NAYVDLGTWWCVTPFIGAGVGGSRVTISNFTDTGINNLPFTTASFATAPTSSKWNFAWAA
EEEEECCCCEEEHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEE
HAGLAYNVNPNLVLELAYSYVDLGQGQTGVLSTYTGTTTGNFFKFKDITSHDLKLGVRWN
CCCEEEECCCCEEEEEEEHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCCCEEEEEEEC
FDNPPPPPMPPLIRKG
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA