| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342768
Identifier: 146342768
GI number: 146342768
Start: 6161437
End: 6162792
Strand: Direct
Name: 146342768
Synonym: BRADO5942
Alternate gene names: NA
Gene position: 6161437-6162792 (Clockwise)
Preceding gene: 146342767
Following gene: 146342776
Centisome position: 82.63
GC content: 62.24
Gene sequence:
>1356_bases ATGCACCGATATCTGCTTACCACCGTCGCGGTCCTCGCGCTCGGCGCCGGCGCGGCGCTCGCGCAAGGCGAGGGCGAATT CCCGGCGACGCTGGCGGGTCACGCCGTGTTGCCCGCCGAATCCTTCATCGACGCCCCGGCGGATGCGCCGGATGATCTCA AGACGTCCGGCAAGTACACAACCGGCAAGCGTGTCGATACGATCGGCAGCGTGATGGGCAAGTCCTTCGAGCGCCCGACC GGCGTCTCGCTGCCGTTCAAGGGACAGCCGCTGCAAGGTCACTCCGGCATCAAGAAGATGGCCGACGGCACCTTCTGGGT CCTCACCGACAACGGCATGGGCGCGCGTTCCAATTCCCCCGACTCCATGCTTTATCTGAACCATTACAAGATCGACTGGA CCAGCGGCAAGGTCGAGCGCCTCGAGACCATCTTCCTGCATGATCCCGACAAGAAGGTGCCGTTCCGCATCGTGCACGAG GACACCGCCAAGCGCTATCTGACCGGATCGGATTTCGACACCGAAGGTTTCCAATTGATCGGTGACAACATCTGGATCGG CGACGAGTTCGGACCCTACATCATCAAGGCCGACAAGACCGGCAAGGTGCTCGCGGTGTTCGAGACGGTGGCCGACGGCA AGCCGGTGCGCTCGCCCGACCATTGGGCCGTGCAGTCGCCGGGCGCGCCCGGAGCGACCTACACGAACGTCAACCTGCGC CGCTCGAAGGGCTTCGAGGGCTTCGCCTCGTCCTCCGACGGCAAGTTCATCTACGGCCTGCTCGAAGGGCCGCTGTGGGA CGCCGACAAGAAGGATTGGGAGCGGGTCGACGGCAAGGAAGCCTCGCGCATCCTCGAATTCGACGTCACCGCCGAGAAGT TCACCGGCCGCTACTGGCAGTATGTGTTCGAGCAGAACGGCAACGCCATCGGCGACTTCAACATGATCGATCCGGCCCGG GGCCTGATCATCGAGCGCGACAATGGCGAAGGCACCAGCGACAAGGCCTGTCCGCAGGGCACCCGAGGCGACAATTGTTT TCCGGATGTCGCCAAGTTCAAGCGCGTCTACAAGATCGAGCTGTCCGAGGCCAATGTCGGCAAGCCGGTCCGCAAGATCG CCTATATCGATCTGATGAAGATCAGGGATCCGGACAAGAAGGCGCGCAAGCCGCTCAATGACGGCGTGCTCACCTTCCCG TTCTTCACGATCGAGAACGTCGACCGCGTCGACGATACCCACATCATCGTAGGCAACGACAACAACCTGCCGTTCTCGTC GAGCCGCGATCCCAACAAGGCCGACGACAACGAGTTCGTGCTGCTCGAAGTGGGTGACTTCCTCAAAGCCAAGTAA
Upstream 100 bases:
>100_bases TTTCTGAGCAGTTCGCCATCATCCGACTGTCATCGAAGTGTCAGCGTCGCGTCAGACGCCCTGTCCACAACGCGCGTGGT TCAAGCTCAGGAGGCTTCCC
Downstream 100 bases:
>100_bases CGGAAGGCAAGTACAGAAGGCAAGTAACCCGCCGCCCTCCGGACCAACGGCGCTGGCGCTGCGACGCCAGCGCCGGTTTT GATCAGGCCGCGCGCACCTT
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Peptide Protein; Signal Peptide; Periplasmic Protein; Glycerophosphoryl Diester Phosphodiesterase Family; PEP-CTERM Exosortase Interaction Domain Protein
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MHRYLLTTVAVLALGAGAALAQGEGEFPATLAGHAVLPAESFIDAPADAPDDLKTSGKYTTGKRVDTIGSVMGKSFERPT GVSLPFKGQPLQGHSGIKKMADGTFWVLTDNGMGARSNSPDSMLYLNHYKIDWTSGKVERLETIFLHDPDKKVPFRIVHE DTAKRYLTGSDFDTEGFQLIGDNIWIGDEFGPYIIKADKTGKVLAVFETVADGKPVRSPDHWAVQSPGAPGATYTNVNLR RSKGFEGFASSSDGKFIYGLLEGPLWDADKKDWERVDGKEASRILEFDVTAEKFTGRYWQYVFEQNGNAIGDFNMIDPAR GLIIERDNGEGTSDKACPQGTRGDNCFPDVAKFKRVYKIELSEANVGKPVRKIAYIDLMKIRDPDKKARKPLNDGVLTFP FFTIENVDRVDDTHIIVGNDNNLPFSSSRDPNKADDNEFVLLEVGDFLKAK
Sequences:
>Translated_451_residues MHRYLLTTVAVLALGAGAALAQGEGEFPATLAGHAVLPAESFIDAPADAPDDLKTSGKYTTGKRVDTIGSVMGKSFERPT GVSLPFKGQPLQGHSGIKKMADGTFWVLTDNGMGARSNSPDSMLYLNHYKIDWTSGKVERLETIFLHDPDKKVPFRIVHE DTAKRYLTGSDFDTEGFQLIGDNIWIGDEFGPYIIKADKTGKVLAVFETVADGKPVRSPDHWAVQSPGAPGATYTNVNLR RSKGFEGFASSSDGKFIYGLLEGPLWDADKKDWERVDGKEASRILEFDVTAEKFTGRYWQYVFEQNGNAIGDFNMIDPAR GLIIERDNGEGTSDKACPQGTRGDNCFPDVAKFKRVYKIELSEANVGKPVRKIAYIDLMKIRDPDKKARKPLNDGVLTFP FFTIENVDRVDDTHIIVGNDNNLPFSSSRDPNKADDNEFVLLEVGDFLKAK >Mature_451_residues MHRYLLTTVAVLALGAGAALAQGEGEFPATLAGHAVLPAESFIDAPADAPDDLKTSGKYTTGKRVDTIGSVMGKSFERPT GVSLPFKGQPLQGHSGIKKMADGTFWVLTDNGMGARSNSPDSMLYLNHYKIDWTSGKVERLETIFLHDPDKKVPFRIVHE DTAKRYLTGSDFDTEGFQLIGDNIWIGDEFGPYIIKADKTGKVLAVFETVADGKPVRSPDHWAVQSPGAPGATYTNVNLR RSKGFEGFASSSDGKFIYGLLEGPLWDADKKDWERVDGKEASRILEFDVTAEKFTGRYWQYVFEQNGNAIGDFNMIDPAR GLIIERDNGEGTSDKACPQGTRGDNCFPDVAKFKRVYKIELSEANVGKPVRKIAYIDLMKIRDPDKKARKPLNDGVLTFP FFTIENVDRVDDTHIIVGNDNNLPFSSSRDPNKADDNEFVLLEVGDFLKAK
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49760; Mature: 49760
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRYLLTTVAVLALGAGAALAQGEGEFPATLAGHAVLPAESFIDAPADAPDDLKTSGKYT CCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEECCHHHHHCCCCCCCCCHHCCCCCC TGKRVDTIGSVMGKSFERPTGVSLPFKGQPLQGHSGIKKMADGTFWVLTDNGMGARSNSP CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCC DSMLYLNHYKIDWTSGKVERLETIFLHDPDKKVPFRIVHEDTAKRYLTGSDFDTEGFQLI CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCHHHEECCCCCCCCCEEEE GDNIWIGDEFGPYIIKADKTGKVLAVFETVADGKPVRSPDHWAVQSPGAPGATYTNVNLR CCEEEECCCCCCEEEEECCCCCEEEEEEHHCCCCCCCCCCCCEEECCCCCCCEEEEEEEE RSKGFEGFASSSDGKFIYGLLEGPLWDADKKDWERVDGKEASRILEFDVTAEKFTGRYWQ CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHCEEEEEECCHHHHCCHHHE YVFEQNGNAIGDFNMIDPARGLIIERDNGEGTSDKACPQGTRGDNCFPDVAKFKRVYKIE EHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE LSEANVGKPVRKIAYIDLMKIRDPDKKARKPLNDGVLTFPFFTIENVDRVDDTHIIVGND ECCCCCCCHHHHHHEEEEEECCCCCHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEECC NNLPFSSSRDPNKADDNEFVLLEVGDFLKAK CCCCCCCCCCCCCCCCCCEEEEEECHHHCCC >Mature Secondary Structure MHRYLLTTVAVLALGAGAALAQGEGEFPATLAGHAVLPAESFIDAPADAPDDLKTSGKYT CCHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCEECCHHHHHCCCCCCCCCHHCCCCCC TGKRVDTIGSVMGKSFERPTGVSLPFKGQPLQGHSGIKKMADGTFWVLTDNGMGARSNSP CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEECCCCCCCCCCC DSMLYLNHYKIDWTSGKVERLETIFLHDPDKKVPFRIVHEDTAKRYLTGSDFDTEGFQLI CCEEEEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEECCCHHHEECCCCCCCCCEEEE GDNIWIGDEFGPYIIKADKTGKVLAVFETVADGKPVRSPDHWAVQSPGAPGATYTNVNLR CCEEEECCCCCCEEEEECCCCCEEEEEEHHCCCCCCCCCCCCEEECCCCCCCEEEEEEEE RSKGFEGFASSSDGKFIYGLLEGPLWDADKKDWERVDGKEASRILEFDVTAEKFTGRYWQ CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHCEEEEEECCHHHHCCHHHE YVFEQNGNAIGDFNMIDPARGLIIERDNGEGTSDKACPQGTRGDNCFPDVAKFKRVYKIE EHHHCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEE LSEANVGKPVRKIAYIDLMKIRDPDKKARKPLNDGVLTFPFFTIENVDRVDDTHIIVGND ECCCCCCCHHHHHHEEEEEECCCCCHHHHCCCCCCEEEEEEEEECCCCCCCCCEEEEECC NNLPFSSSRDPNKADDNEFVLLEVGDFLKAK CCCCCCCCCCCCCCCCCCEEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA