Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yyaM [H]

Identifier: 146342767

GI number: 146342767

Start: 6160374

End: 6161318

Strand: Direct

Name: yyaM [H]

Synonym: BRADO5941

Alternate gene names: 146342767

Gene position: 6160374-6161318 (Clockwise)

Preceding gene: 146342766

Following gene: 146342768

Centisome position: 82.62

GC content: 66.56

Gene sequence:

>945_bases
GTGCCCACCGTATCACATTCCACCACGCCGCTGGCCTGGCTCAACAACCAGCCTTATCTGCTGCTGACGCTGGCCTCGCT
GTTCTGGGCCGGCAACATCGTGCTGGCGCGCTATGTCGCCGGCCACGTGCCGCCGCTGACCTTGTCCTGCATCCGCTGGA
TCGGAACCTTTCTGATGCTATGGCCGTTCGCGCGGGCACATCTCGTGCGCGACTGGCGCACTTTGCTCGCGAGCTGGCCG
CTGCTGCTCGTCCTGGCGCTGACCGGCTTCGCCATCAACAACGCGCTGTCCTATTGGGCGATGCAGTATACCCAGGCCCT
CAACGGCCTGCTGATCCAATCGTCGGCTCCGCTCTTCGTGGCGTTGTGGTCGCTCGTGCTGTTCGGCGTACGGCTGACGG
CGGCGCAGTTCGCCGGCATCGCGATGTCCCTGACCGGCGTGCTGGTGATCCTGCTGCGCGGCGACCTCGGCGCGTTGGCC
GCGATCCAGTTCAACCGCGGCGACCTGATGTTCGCCGGCGCGCTGCTGGTGTTCGGCATCTACTCCGCTGTCATGACACG
GCGGCCAGCCGTGCATCAGCTGTCGCTGATCTCGTCCTGCACCGCCCTGGGCGCCCTGCTGCTGCTGCCGCTGGCGGCCT
GGGAATACACGTCCGGCTTTGTGCTGCAGCTCGATCTCTTGTCGATCCTGACGCTCGGCTACGTCGTGGTGTTCGCCTCG
ACGCTGGCTTATCTGTCCTTCAACCGCGGCATCAGCCTGATCGGACCGAACCGGGCCGCTCCCTTCCTGCACCTGGTGCC
GTTGTTCGGCTCGGTGCTGGCGATCCTCCTGCTCGGCGAGGAGCTCAAGCCGTTCCACCTCGCGGGCTACGCGCTTGTGA
TCGCCGGCGTGATCATCGCGTCGCGCGTCCCGCTCCGGCAGCCGCATCCGACGCCGAAGCCGTGA

Upstream 100 bases:

>100_bases
TGCCGCGAAACAGCGGCGCTGCATGGCTCCAATTCGTCGCTATTCATTGTACCGCGAGGCGATTTGTCTCACCATGGATG
GCCTGACGCCCGAGCCTCCC

Downstream 100 bases:

>100_bases
GCCTGCGGCAAGACGCCCTTTCTGAGCAGTTCGCCATCATCCGACTGTCATCGAAGTGTCAGCGTCGCGTCAGACGCCCT
GTCCACAACGCGCGTGGTTC

Product: DMT family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MPTVSHSTTPLAWLNNQPYLLLTLASLFWAGNIVLARYVAGHVPPLTLSCIRWIGTFLMLWPFARAHLVRDWRTLLASWP
LLLVLALTGFAINNALSYWAMQYTQALNGLLIQSSAPLFVALWSLVLFGVRLTAAQFAGIAMSLTGVLVILLRGDLGALA
AIQFNRGDLMFAGALLVFGIYSAVMTRRPAVHQLSLISSCTALGALLLLPLAAWEYTSGFVLQLDLLSILTLGYVVVFAS
TLAYLSFNRGISLIGPNRAAPFLHLVPLFGSVLAILLLGEELKPFHLAGYALVIAGVIIASRVPLRQPHPTPKP

Sequences:

>Translated_314_residues
MPTVSHSTTPLAWLNNQPYLLLTLASLFWAGNIVLARYVAGHVPPLTLSCIRWIGTFLMLWPFARAHLVRDWRTLLASWP
LLLVLALTGFAINNALSYWAMQYTQALNGLLIQSSAPLFVALWSLVLFGVRLTAAQFAGIAMSLTGVLVILLRGDLGALA
AIQFNRGDLMFAGALLVFGIYSAVMTRRPAVHQLSLISSCTALGALLLLPLAAWEYTSGFVLQLDLLSILTLGYVVVFAS
TLAYLSFNRGISLIGPNRAAPFLHLVPLFGSVLAILLLGEELKPFHLAGYALVIAGVIIASRVPLRQPHPTPKP
>Mature_313_residues
PTVSHSTTPLAWLNNQPYLLLTLASLFWAGNIVLARYVAGHVPPLTLSCIRWIGTFLMLWPFARAHLVRDWRTLLASWPL
LLVLALTGFAINNALSYWAMQYTQALNGLLIQSSAPLFVALWSLVLFGVRLTAAQFAGIAMSLTGVLVILLRGDLGALAA
IQFNRGDLMFAGALLVFGIYSAVMTRRPAVHQLSLISSCTALGALLLLPLAAWEYTSGFVLQLDLLSILTLGYVVVFAST
LAYLSFNRGISLIGPNRAAPFLHLVPLFGSVLAILLLGEELKPFHLAGYALVIAGVIIASRVPLRQPHPTPKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34034; Mature: 33903

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVSHSTTPLAWLNNQPYLLLTLASLFWAGNIVLARYVAGHVPPLTLSCIRWIGTFLML
CCCCCCCCCCEEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
WPFARAHLVRDWRTLLASWPLLLVLALTGFAINNALSYWAMQYTQALNGLLIQSSAPLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHH
ALWSLVLFGVRLTAAQFAGIAMSLTGVLVILLRGDLGALAAIQFNRGDLMFAGALLVFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
YSAVMTRRPAVHQLSLISSCTALGALLLLPLAAWEYTSGFVLQLDLLSILTLGYVVVFAS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH
TLAYLSFNRGISLIGPNRAAPFLHLVPLFGSVLAILLLGEELKPFHLAGYALVIAGVIIA
HHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SRVPLRQPHPTPKP
CCCCCCCCCCCCCC
>Mature Secondary Structure 
PTVSHSTTPLAWLNNQPYLLLTLASLFWAGNIVLARYVAGHVPPLTLSCIRWIGTFLML
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
WPFARAHLVRDWRTLLASWPLLLVLALTGFAINNALSYWAMQYTQALNGLLIQSSAPLFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHH
ALWSLVLFGVRLTAAQFAGIAMSLTGVLVILLRGDLGALAAIQFNRGDLMFAGALLVFGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
YSAVMTRRPAVHQLSLISSCTALGALLLLPLAAWEYTSGFVLQLDLLSILTLGYVVVFAS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH
TLAYLSFNRGISLIGPNRAAPFLHLVPLFGSVLAILLLGEELKPFHLAGYALVIAGVIIA
HHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
SRVPLRQPHPTPKP
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]