The gene/protein map for NC_009445 is currently unavailable.
Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is yyaM [H]

Identifier: 146342766

GI number: 146342766

Start: 6159338

End: 6160267

Strand: Direct

Name: yyaM [H]

Synonym: BRADO5940

Alternate gene names: 146342766

Gene position: 6159338-6160267 (Clockwise)

Preceding gene: 146342765

Following gene: 146342767

Centisome position: 82.6

GC content: 65.16

Gene sequence:

>930_bases
ATGTCTGCCGCCGATCCCACGGTGTCCCCAGCGCCCGCGCGCGCCTGGGTCGCCAACCAACCCTACGTGCTGCTCAGCAT
CACCGCGCTGTGCTGGGCCGGCAACGCGATCGTCGGCCGCCTTGCCGCCGGACACATTCCCCCGGTGACGCTGTCGTTCC
TGCGCTGGTCGCTGGCGTTCCTGATCATTCTGCCGCTAGCCTGGAAGCAGCTTCGCCAGGACTGGCCGGCGATCCGCTCC
AAGCTCGGCATCATGGTCGCGCTGTCGGTCACCGGCATCGGCGCCTTCAACACGCTGCAATACTGGTCGCTGGAATACAC
CCAGGCGCTCAACACGCTGCTGCTACAATCCGGCGGCCCGCTGATCGTCGCGCTCTGGTCGATGCTGCTGCTGCGCGTGC
ATCTGACGTTCGCGCAGGCGGTCGGCATCGTGCTGTCGATGATCGGCGTGTTGCTGATCCTCACCCGCGGTCACCCGGCA
GCGATCGCCGACATCAGCTTCAACAAGGGCGACCTGATTTTCCTGCTGGCTATGGCGGTGTTCGGCTTCTACTCGGTGCT
GACGATCAAGCGGCCGCAGATCCACGGCCTATCGATGGTCGCATTCACCTTCGGCTGTGGTGCCGCAAGCCTGATCCCGC
TGTTGATCTGGGAGCTCAACACGCGCCCGGTGATGGCGTTCGACACCCAGAACCTGCTGTCGCTGCTCTACGTCGCGATC
TTCCCCTCGACCATCGCCTATCTCTGCTTCAATCGCGGCGTGCTGCTGATCGGCGCCAACCGCGCCGCGCCGTTCTTTCA
TGTGGTGCCGGTGTTCGGCTCGATCATGGCGTTCGTCTTCCTCGGCGAGCAGCCGCAACTCTTCCACGTGATCGGCTTCG
CCCTGGTGCTGGCCGGCGTCTACGCCGCCTCGCGCAAGCAGGCGACGTGA

Upstream 100 bases:

>100_bases
GCAGCCGCAATTAGTGTCTCTCCGAATGGCCGGGGAGGACCAGCGGCCGGGATGACCGGGCCGGATACCGCGGCGCAAGA
ACCGGGACCAACACCGTCGC

Downstream 100 bases:

>100_bases
GGGGGATGCCGCGAAACAGCGGCGCTGCATGGCTCCAATTCGTCGCTATTCATTGTACCGCGAGGCGATTTGTCTCACCA
TGGATGGCCTGACGCCCGAG

Product: DMT family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSAADPTVSPAPARAWVANQPYVLLSITALCWAGNAIVGRLAAGHIPPVTLSFLRWSLAFLIILPLAWKQLRQDWPAIRS
KLGIMVALSVTGIGAFNTLQYWSLEYTQALNTLLLQSGGPLIVALWSMLLLRVHLTFAQAVGIVLSMIGVLLILTRGHPA
AIADISFNKGDLIFLLAMAVFGFYSVLTIKRPQIHGLSMVAFTFGCGAASLIPLLIWELNTRPVMAFDTQNLLSLLYVAI
FPSTIAYLCFNRGVLLIGANRAAPFFHVVPVFGSIMAFVFLGEQPQLFHVIGFALVLAGVYAASRKQAT

Sequences:

>Translated_309_residues
MSAADPTVSPAPARAWVANQPYVLLSITALCWAGNAIVGRLAAGHIPPVTLSFLRWSLAFLIILPLAWKQLRQDWPAIRS
KLGIMVALSVTGIGAFNTLQYWSLEYTQALNTLLLQSGGPLIVALWSMLLLRVHLTFAQAVGIVLSMIGVLLILTRGHPA
AIADISFNKGDLIFLLAMAVFGFYSVLTIKRPQIHGLSMVAFTFGCGAASLIPLLIWELNTRPVMAFDTQNLLSLLYVAI
FPSTIAYLCFNRGVLLIGANRAAPFFHVVPVFGSIMAFVFLGEQPQLFHVIGFALVLAGVYAASRKQAT
>Mature_308_residues
SAADPTVSPAPARAWVANQPYVLLSITALCWAGNAIVGRLAAGHIPPVTLSFLRWSLAFLIILPLAWKQLRQDWPAIRSK
LGIMVALSVTGIGAFNTLQYWSLEYTQALNTLLLQSGGPLIVALWSMLLLRVHLTFAQAVGIVLSMIGVLLILTRGHPAA
IADISFNKGDLIFLLAMAVFGFYSVLTIKRPQIHGLSMVAFTFGCGAASLIPLLIWELNTRPVMAFDTQNLLSLLYVAIF
PSTIAYLCFNRGVLLIGANRAAPFFHVVPVFGSIMAFVFLGEQPQLFHVIGFALVLAGVYAASRKQAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33477; Mature: 33346

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADPTVSPAPARAWVANQPYVLLSITALCWAGNAIVGRLAAGHIPPVTLSFLRWSLAF
CCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHH
LIILPLAWKQLRQDWPAIRSKLGIMVALSVTGIGAFNTLQYWSLEYTQALNTLLLQSGGP
HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
LIVALWSMLLLRVHLTFAQAVGIVLSMIGVLLILTRGHPAAIADISFNKGDLIFLLAMAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH
FGFYSVLTIKRPQIHGLSMVAFTFGCGAASLIPLLIWELNTRPVMAFDTQNLLSLLYVAI
HHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH
FPSTIAYLCFNRGVLLIGANRAAPFFHVVPVFGSIMAFVFLGEQPQLFHVIGFALVLAGV
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YAASRKQAT
HHHHCCCCC
>Mature Secondary Structure 
SAADPTVSPAPARAWVANQPYVLLSITALCWAGNAIVGRLAAGHIPPVTLSFLRWSLAF
CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHH
LIILPLAWKQLRQDWPAIRSKLGIMVALSVTGIGAFNTLQYWSLEYTQALNTLLLQSGGP
HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
LIVALWSMLLLRVHLTFAQAVGIVLSMIGVLLILTRGHPAAIADISFNKGDLIFLLAMAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHH
FGFYSVLTIKRPQIHGLSMVAFTFGCGAASLIPLLIWELNTRPVMAFDTQNLLSLLYVAI
HHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH
FPSTIAYLCFNRGVLLIGANRAAPFFHVVPVFGSIMAFVFLGEQPQLFHVIGFALVLAGV
HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YAASRKQAT
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]