Click here to switch to the map view.

The map label for this gene is 146342747

Identifier: 146342747

GI number: 146342747

Start: 6137903

End: 6139012

Strand: Direct

Name: 146342747

Synonym: BRADO5919

Alternate gene names: NA

Gene position: 6137903-6139012 (Clockwise)

Preceding gene: 146342746

Following gene: 146342748

Centisome position: 82.32

GC content: 65.95

Gene sequence:

>1110_bases
ATGACCACCTTCTCCCCGCATCAGGATTCCGCCCTCAAGGCCGTCGGTGACTGGCTGAAAGAAAAGCCCGGCCGGAACGG
CACGCCGCAGGTGTTCCGGCTGTTCGGCTATGCCGGCACCGGCAAGACCACGCTCGCCCGCCACATCGCCGAGGGCGTCG
ACGGCGAGGTCAAGTTCGCCGCGTTCACCGGCAAGGCGGCGCTGGTGATGCGTAGCAAGGGCTGCGACAACGCCTCCACC
ATCCACTCGCTGATCTATCGCGCCCAGGAGAGCGGCGAGGAGCAGCCGAATTTCGAATTGTGGGACGATGCGCCGGCCTC
CAAGGCCAAGCTGATCATCATCGACGAATGCTCGATGGTCGACGCCGATCTCGGCCGTGACCTGCTCTCCTTCGATTGCC
CGCTGCTGGTGCTCGGCGATCCCGCGCAGCTGCCGCCGGTCAAGGGCGGCGGCTTCTTCACCGACAGCGAGCCCGACGTG
ATGTTGACCGAGGTGCATCGCCAGGCGCAGGACGATCCGATCGTGCGGATGTCGATGGACGTGCGCGAGGGCAACACGCT
GGACATCGGCCGCTACGGCGAGAGCGAGGTGGTCGAGCGCCGCGAGCTCGATCCGTCGCGTGTGATGGAGGCCGACCAGG
TGCTGGTCGGCCGCAACGCCACCCGCCGCGCCTACAACAACCGCTTCCGCCAGCGCCTCGACATCGAGGAGCCGCTGCCG
GTCGCCGGCGACAAGCTGGTCTGCCTGCGCAACAACCGCAAGAAGGGCCTGTTCAATGGCGGCCTGTGGCGGGTGAAGTC
GCGCGCGACCTCGAAGTCGAAGATCGTGACGATGCGGGTGGCACCCGAAGAGGATTTCGGCCGCAAGGTCACCAAGGTCT
CGGTGCGCGGCGAATGCTTCGCCGGCGGCATCGAGGACATCCCCTGGGAGCAGCGCAAGCCGTATGACGAGTTCGACTAC
GGCTATGTGCTGACCGTGCACAAGTCGCAGGGCTCGCAATGGGACGACGTCGTGCTGTTCGACGAAAGCTTTGCCTTCCA
GGAAGCCCGCGCCCGCTGGCTCTACACCGGCATCACGCGCGCTGCGAAGCGGTTGTCCATCGTCGTTTAA

Upstream 100 bases:

>100_bases
TCAGAATCGCCTCTGCACCCATTCCAGCTTGATCTCGCCGAAACAGCCCTTAGGTTCACGGAATGTCCCGAGTCGCCCCG
CGGCTCCTTTTCCGTGAGCC

Downstream 100 bases:

>100_bases
CCTTGGCGGTATCGCCCTGCCCGCCCTGTTCCCGCAAAGCCTGCGACCCGTTGATCCAGGTCAAGCTGCCGCACTGCGCT
TGGCGGATAAAAAACGATTC

Product: putative deoxyribonuclease

Products: NA

Alternate protein names: Exodeoxyribonuclease V; ATPase; Deoxyribonuclease; Helicase; RecD/TraA Family Helicase; Exonuclease V Subunit Alpha; RecD-Like Exodeoxyribonuclease; Exodeoxyribonuclease V Subunit Alpha; ATP-Dependent Exodeoxyribonuclease; AAA ATPase; ATP-Dependent ExoDNAse; Helicase RecD/TraA Family Protein; AAA Family ATPase; Exodeoxyribosylnuclease; Bacteriophage-Type DNA Helicase; Exodeoxyribonuclease; Exonuclease With DNA/RNA Helicase Motif; Helicase ATP-Dependent; ATP-Dependent RecD/TraA Family DNA Helicase; ATP-Dependent ExoDNAse Alpha Subunit; Exodeoxyribonuclease V Alpha Chain

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MTTFSPHQDSALKAVGDWLKEKPGRNGTPQVFRLFGYAGTGKTTLARHIAEGVDGEVKFAAFTGKAALVMRSKGCDNAST
IHSLIYRAQESGEEQPNFELWDDAPASKAKLIIIDECSMVDADLGRDLLSFDCPLLVLGDPAQLPPVKGGGFFTDSEPDV
MLTEVHRQAQDDPIVRMSMDVREGNTLDIGRYGESEVVERRELDPSRVMEADQVLVGRNATRRAYNNRFRQRLDIEEPLP
VAGDKLVCLRNNRKKGLFNGGLWRVKSRATSKSKIVTMRVAPEEDFGRKVTKVSVRGECFAGGIEDIPWEQRKPYDEFDY
GYVLTVHKSQGSQWDDVVLFDESFAFQEARARWLYTGITRAAKRLSIVV

Sequences:

>Translated_369_residues
MTTFSPHQDSALKAVGDWLKEKPGRNGTPQVFRLFGYAGTGKTTLARHIAEGVDGEVKFAAFTGKAALVMRSKGCDNAST
IHSLIYRAQESGEEQPNFELWDDAPASKAKLIIIDECSMVDADLGRDLLSFDCPLLVLGDPAQLPPVKGGGFFTDSEPDV
MLTEVHRQAQDDPIVRMSMDVREGNTLDIGRYGESEVVERRELDPSRVMEADQVLVGRNATRRAYNNRFRQRLDIEEPLP
VAGDKLVCLRNNRKKGLFNGGLWRVKSRATSKSKIVTMRVAPEEDFGRKVTKVSVRGECFAGGIEDIPWEQRKPYDEFDY
GYVLTVHKSQGSQWDDVVLFDESFAFQEARARWLYTGITRAAKRLSIVV
>Mature_368_residues
TTFSPHQDSALKAVGDWLKEKPGRNGTPQVFRLFGYAGTGKTTLARHIAEGVDGEVKFAAFTGKAALVMRSKGCDNASTI
HSLIYRAQESGEEQPNFELWDDAPASKAKLIIIDECSMVDADLGRDLLSFDCPLLVLGDPAQLPPVKGGGFFTDSEPDVM
LTEVHRQAQDDPIVRMSMDVREGNTLDIGRYGESEVVERRELDPSRVMEADQVLVGRNATRRAYNNRFRQRLDIEEPLPV
AGDKLVCLRNNRKKGLFNGGLWRVKSRATSKSKIVTMRVAPEEDFGRKVTKVSVRGECFAGGIEDIPWEQRKPYDEFDYG
YVLTVHKSQGSQWDDVVLFDESFAFQEARARWLYTGITRAAKRLSIVV

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 41297; Mature: 41166

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFSPHQDSALKAVGDWLKEKPGRNGTPQVFRLFGYAGTGKTTLARHIAEGVDGEVKFA
CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCHHHHHHHHHHCCCCCEEEE
AFTGKAALVMRSKGCDNASTIHSLIYRAQESGEEQPNFELWDDAPASKAKLIIIDECSMV
EECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCHH
DADLGRDLLSFDCPLLVLGDPAQLPPVKGGGFFTDSEPDVMLTEVHRQAQDDPIVRMSMD
HHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEE
VREGNTLDIGRYGESEVVERRELDPSRVMEADQVLVGRNATRRAYNNRFRQRLDIEEPLP
ECCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCC
VAGDKLVCLRNNRKKGLFNGGLWRVKSRATSKSKIVTMRVAPEEDFGRKVTKVSVRGECF
CCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHCCEEEEEEECCCEE
AGGIEDIPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQEARARWLYTGITR
ECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
AAKRLSIVV
HHHHHEECC
>Mature Secondary Structure 
TTFSPHQDSALKAVGDWLKEKPGRNGTPQVFRLFGYAGTGKTTLARHIAEGVDGEVKFA
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCHHHHHHHHHHCCCCCEEEE
AFTGKAALVMRSKGCDNASTIHSLIYRAQESGEEQPNFELWDDAPASKAKLIIIDECSMV
EECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCEEEEEEECCCHH
DADLGRDLLSFDCPLLVLGDPAQLPPVKGGGFFTDSEPDVMLTEVHRQAQDDPIVRMSMD
HHHHCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEE
VREGNTLDIGRYGESEVVERRELDPSRVMEADQVLVGRNATRRAYNNRFRQRLDIEEPLP
ECCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCCCCC
VAGDKLVCLRNNRKKGLFNGGLWRVKSRATSKSKIVTMRVAPEEDFGRKVTKVSVRGECF
CCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHCCEEEEEEECCCEE
AGGIEDIPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQEARARWLYTGITR
ECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH
AAKRLSIVV
HHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA