| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is norD [H]
Identifier: 146342693
GI number: 146342693
Start: 6078060
End: 6080342
Strand: Direct
Name: norD [H]
Synonym: BRADO5860
Alternate gene names: 146342693
Gene position: 6078060-6080342 (Clockwise)
Preceding gene: 146342692
Following gene: 146342711
Centisome position: 81.51
GC content: 71.35
Gene sequence:
>2283_bases GTGAGCGGCGCGGAAGGGCACACCCGCACGCTGCATCTGTGGATGCGCCAGCGCGAGACGTTGCGGCCGTTGTTCATTGC CGCGTGGGACACGCTGTCGCGCCGCTTCGATCCGCCCGTGATGGAGGCATGGGCCGGCGCGGTGCTCACTCTCGCCAACG TCAATGCAGGCGCGGCCTGCCTGATCGCCTATTGGGATGCGAGCACCAGCGACGCCGCGGACGAGATCGCGCCGCTGCTC GGCGCCGCGCAGGCCGCCGCCGAGATCTGCCGCCATGCCGGCGCGCCGGCGGCGACCAGCGCCTTGAAGGCGCTGCCCGC CGCGCGCCGCATCCTCGGGCGCGGCGCGGCGCTATCGCGCTGGTGGCGGACGATGACGGCGCTGGCAACCCAGGCGCCGG AGTCGCTCGCGGCCGCGGCGGGCCACATGCCCGAGATCCTGCGGCCGGGCACGATCGAGGCGTTCGAAAGCTTTGTCGCC TCCGGCCTGCGCGCTGCCGCCGGCGACCGCCGCAAGCGGCTCGCGTTTTTTTCGCTGCAGGACGAGCTGGCGCTGCGGCT GATCGCGCGCGATCCCGGCGCGGTGACGTTCGCCGACGTCGAGACCGAGCTGAAGGCTTTTCTCACGGCGTTGTTCGGCG AGGTGCCGCTGCTGCGAAGCATGGCGGTGGACGGCGGCCAGACGCCGCAACGCCGCGTGGCGATCGCTGGGCCGCTGATC CGCCTGCCCGAGATCTATCGCGGCACGCAAGGCGCGGCGGCGCGCGCGTTGTTTCGCGCGGCCGCGGCCCATGCGCAGGC GCATCTCGTGCTCGGACGCGCGCGCTTTGCTGTCGGGCAGCTCAAGCCGCTGCAGCTCGCACTGGTCAACCTGATCGAGG ACGCCCGCGTCGAAACGCTTGCGATGCGCGACTTTTCGGGCCTGCGGCGGCTGTGGGCGCCATACCATGTCGCCGTCCCG ACCAGCGTCGCGACGGCGCCGATGCTGCTGGCACGGCTGGCGCGCGCCTTGTTCGATCCGTCCTATCGCGATGAGGACGG CTTCGTCAGCAAGGGCCGCGCGCTGTTCACCGCGGCGCTGCCGCGCCTCGACGATCACGCCATCAGCCGCGAGATCGGCA TGCTGCTCGGCAACGATCTCGGCCAGATGCGCGTGCAGTTCAACGCCAAGACCTATGTCGTCGAGCCGCTCTATCGCGAC GATGGTCTCGGCCTGTGGGAGTTCGACGGCGATGCGGCTCCGTCGGCCGAGGTGCTCGAGCTGTTCATCGATGCGGTCAG ACCGGAGCAGCAGGAGAGCGAGAGCGGCGAACGGCGCGAGCAGGATGAGGACAACGCGGCGGCCGAGCCCGGACGCGCCC GCCCCGTCGCGCCGGACGCGCGCGGCGTCATGCTGGCGCGCTATCCGGAATGGGATCGCGTCGATGCGATCGAGCGGCCG GACTGGACCACTGTGCGCGAGGTCGCGGCCGGAAGCGGCGGCTCGCATGCCATCGAGGACGCACTGGAGCAGGCCAGCAG CTTGCGCAGCCGTGTCGCGCGGCTGGTCCGCGCCGTCCGCATCGGCCGCACCGTTCGGCTGAAGCGCCAGCAGGACGGCC ACGACCTCGACCTCGACGCCGTGCTCGACGCCGGGATCGCGCTCCGCGGCGGCGAGATGCCGGATCCGCGCGTCTTCCGG TCGGCCAAGGCGCTGCATCGCGACCTCTCGGCGCTGCTGCTGATCGACGTGTCGGAATCGACACGCGACCGTCTGGCGTC GGGCGCGACGGTCCTCGATCTCGAACGCCTGGCCGTCGCTCTGCTGGCCGAGGCGATGGACCAGCTCGGCGACACGTTCG GGCTGCTCGCATTCGCCTCCGACGGCCGCGACGACATCCGGATGACGAGCATCAAGAACTTCGGCGAAGCCTATGACCGC GATTGCCGCGCAAGGCTCGCGGGCCTCGTGTCCGGACTGTCCACACGTCTGGGCGCGGCATTGCGCCATGCCGGCGCCGT GCTCGGCGTAGCAACAAGCAGCCGCAAGCTGCTGATCGTGCTCACCGACGGCGAGCCGTCCGACATCGACGTCTCCGATC CGCTCGACCTGATCGAGGACGCCCGTCGCGCCGCGCTCGGGCTGCACGCGCAGGGCATCGATGCCTATGGCGTCGTGCTT GGCCGGGCCGGCGCGGAGGCCGCGACGCGCGTCTTCGGCCGCGGCAACACCATGCTGGTGCACCGGGTCGAGGATCTGCC GGCGCGGCTGTCCGAACTCTATTTCAGGCTGGCGCGGCGATGA
Upstream 100 bases:
>100_bases CCGGCATCGTGCTGCCGATCACCGACAATCCGGATATCCGCGTCGCGCTCTCCGACGCGATCGCGGCGTGCCTGCCGTGA GCGCGGCGCCGCTGCAGCTG
Downstream 100 bases:
>100_bases GGCTATTTGCGCCGGCGCGACAACGTCACGCCCAGCGCGGCCGCCGCTGCGACGTGGAACGCCGCATCCGTTGCGCGCGA CAAGGTGCCGCCATCGGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 760; Mature: 759
Protein sequence:
>760_residues MSGAEGHTRTLHLWMRQRETLRPLFIAAWDTLSRRFDPPVMEAWAGAVLTLANVNAGAACLIAYWDASTSDAADEIAPLL GAAQAAAEICRHAGAPAATSALKALPAARRILGRGAALSRWWRTMTALATQAPESLAAAAGHMPEILRPGTIEAFESFVA SGLRAAAGDRRKRLAFFSLQDELALRLIARDPGAVTFADVETELKAFLTALFGEVPLLRSMAVDGGQTPQRRVAIAGPLI RLPEIYRGTQGAAARALFRAAAAHAQAHLVLGRARFAVGQLKPLQLALVNLIEDARVETLAMRDFSGLRRLWAPYHVAVP TSVATAPMLLARLARALFDPSYRDEDGFVSKGRALFTAALPRLDDHAISREIGMLLGNDLGQMRVQFNAKTYVVEPLYRD DGLGLWEFDGDAAPSAEVLELFIDAVRPEQQESESGERREQDEDNAAAEPGRARPVAPDARGVMLARYPEWDRVDAIERP DWTTVREVAAGSGGSHAIEDALEQASSLRSRVARLVRAVRIGRTVRLKRQQDGHDLDLDAVLDAGIALRGGEMPDPRVFR SAKALHRDLSALLLIDVSESTRDRLASGATVLDLERLAVALLAEAMDQLGDTFGLLAFASDGRDDIRMTSIKNFGEAYDR DCRARLAGLVSGLSTRLGAALRHAGAVLGVATSSRKLLIVLTDGEPSDIDVSDPLDLIEDARRAALGLHAQGIDAYGVVL GRAGAEAATRVFGRGNTMLVHRVEDLPARLSELYFRLARR
Sequences:
>Translated_760_residues MSGAEGHTRTLHLWMRQRETLRPLFIAAWDTLSRRFDPPVMEAWAGAVLTLANVNAGAACLIAYWDASTSDAADEIAPLL GAAQAAAEICRHAGAPAATSALKALPAARRILGRGAALSRWWRTMTALATQAPESLAAAAGHMPEILRPGTIEAFESFVA SGLRAAAGDRRKRLAFFSLQDELALRLIARDPGAVTFADVETELKAFLTALFGEVPLLRSMAVDGGQTPQRRVAIAGPLI RLPEIYRGTQGAAARALFRAAAAHAQAHLVLGRARFAVGQLKPLQLALVNLIEDARVETLAMRDFSGLRRLWAPYHVAVP TSVATAPMLLARLARALFDPSYRDEDGFVSKGRALFTAALPRLDDHAISREIGMLLGNDLGQMRVQFNAKTYVVEPLYRD DGLGLWEFDGDAAPSAEVLELFIDAVRPEQQESESGERREQDEDNAAAEPGRARPVAPDARGVMLARYPEWDRVDAIERP DWTTVREVAAGSGGSHAIEDALEQASSLRSRVARLVRAVRIGRTVRLKRQQDGHDLDLDAVLDAGIALRGGEMPDPRVFR SAKALHRDLSALLLIDVSESTRDRLASGATVLDLERLAVALLAEAMDQLGDTFGLLAFASDGRDDIRMTSIKNFGEAYDR DCRARLAGLVSGLSTRLGAALRHAGAVLGVATSSRKLLIVLTDGEPSDIDVSDPLDLIEDARRAALGLHAQGIDAYGVVL GRAGAEAATRVFGRGNTMLVHRVEDLPARLSELYFRLARR >Mature_759_residues SGAEGHTRTLHLWMRQRETLRPLFIAAWDTLSRRFDPPVMEAWAGAVLTLANVNAGAACLIAYWDASTSDAADEIAPLLG AAQAAAEICRHAGAPAATSALKALPAARRILGRGAALSRWWRTMTALATQAPESLAAAAGHMPEILRPGTIEAFESFVAS GLRAAAGDRRKRLAFFSLQDELALRLIARDPGAVTFADVETELKAFLTALFGEVPLLRSMAVDGGQTPQRRVAIAGPLIR LPEIYRGTQGAAARALFRAAAAHAQAHLVLGRARFAVGQLKPLQLALVNLIEDARVETLAMRDFSGLRRLWAPYHVAVPT SVATAPMLLARLARALFDPSYRDEDGFVSKGRALFTAALPRLDDHAISREIGMLLGNDLGQMRVQFNAKTYVVEPLYRDD GLGLWEFDGDAAPSAEVLELFIDAVRPEQQESESGERREQDEDNAAAEPGRARPVAPDARGVMLARYPEWDRVDAIERPD WTTVREVAAGSGGSHAIEDALEQASSLRSRVARLVRAVRIGRTVRLKRQQDGHDLDLDAVLDAGIALRGGEMPDPRVFRS AKALHRDLSALLLIDVSESTRDRLASGATVLDLERLAVALLAEAMDQLGDTFGLLAFASDGRDDIRMTSIKNFGEAYDRD CRARLAGLVSGLSTRLGAALRHAGAVLGVATSSRKLLIVLTDGEPSDIDVSDPLDLIEDARRAALGLHAQGIDAYGVVLG RAGAEAATRVFGRGNTMLVHRVEDLPARLSELYFRLARR
Specific function: Part of the operon norEFCBQD encoding nitric oxide reductase. Essential virulence factor, probably involved in the detoxification of nitric oxide (NO) produced in the macrophages during the innate response against infection [H]
COG id: COG4548
COG function: function code P; Nitric oxide reductase activation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 82094; Mature: 81962
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAEGHTRTLHLWMRQRETLRPLFIAAWDTLSRRFDPPVMEAWAGAVLTLANVNAGAAC CCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCEE LIAYWDASTSDAADEIAPLLGAAQAAAEICRHAGAPAATSALKALPAARRILGRGAALSR EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH WWRTMTALATQAPESLAAAAGHMPEILRPGTIEAFESFVASGLRAAAGDRRKRLAFFSLQ HHHHHHHHHHHCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHEEEEEHH DELALRLIARDPGAVTFADVETELKAFLTALFGEVPLLRSMAVDGGQTPQRRVAIAGPLI HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHEEEECCCCH RLPEIYRGTQGAAARALFRAAAAHAQAHLVLGRARFAVGQLKPLQLALVNLIEDARVETL HCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AMRDFSGLRRLWAPYHVAVPTSVATAPMLLARLARALFDPSYRDEDGFVSKGRALFTAAL HHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHH PRLDDHAISREIGMLLGNDLGQMRVQFNAKTYVVEPLYRDDGLGLWEFDGDAAPSAEVLE CCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCEECCCCCEEEECCCCCCCHHHHHH LFIDAVRPEQQESESGERREQDEDNAAAEPGRARPVAPDARGVMLARYPEWDRVDAIERP HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC DWTTVREVAAGSGGSHAIEDALEQASSLRSRVARLVRAVRIGRTVRLKRQQDGHDLDLDA CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH VLDAGIALRGGEMPDPRVFRSAKALHRDLSALLLIDVSESTRDRLASGATVLDLERLAVA HHHCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHH LLAEAMDQLGDTFGLLAFASDGRDDIRMTSIKNFGEAYDRDCRARLAGLVSGLSTRLGAA HHHHHHHHHCCHHEEEEEECCCCCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LRHAGAVLGVATSSRKLLIVLTDGEPSDIDVSDPLDLIEDARRAALGLHAQGIDAYGVVL HHHHCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH GRAGAEAATRVFGRGNTMLVHRVEDLPARLSELYFRLARR CCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGAEGHTRTLHLWMRQRETLRPLFIAAWDTLSRRFDPPVMEAWAGAVLTLANVNAGAAC CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHCCCEEEEECCCCCCEE LIAYWDASTSDAADEIAPLLGAAQAAAEICRHAGAPAATSALKALPAARRILGRGAALSR EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH WWRTMTALATQAPESLAAAAGHMPEILRPGTIEAFESFVASGLRAAAGDRRKRLAFFSLQ HHHHHHHHHHHCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHEEEEEHH DELALRLIARDPGAVTFADVETELKAFLTALFGEVPLLRSMAVDGGQTPQRRVAIAGPLI HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHEEEECCCCH RLPEIYRGTQGAAARALFRAAAAHAQAHLVLGRARFAVGQLKPLQLALVNLIEDARVETL HCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH AMRDFSGLRRLWAPYHVAVPTSVATAPMLLARLARALFDPSYRDEDGFVSKGRALFTAAL HHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHH PRLDDHAISREIGMLLGNDLGQMRVQFNAKTYVVEPLYRDDGLGLWEFDGDAAPSAEVLE CCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCEECCCCCEEEECCCCCCCHHHHHH LFIDAVRPEQQESESGERREQDEDNAAAEPGRARPVAPDARGVMLARYPEWDRVDAIERP HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC DWTTVREVAAGSGGSHAIEDALEQASSLRSRVARLVRAVRIGRTVRLKRQQDGHDLDLDA CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHH VLDAGIALRGGEMPDPRVFRSAKALHRDLSALLLIDVSESTRDRLASGATVLDLERLAVA HHHCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHH LLAEAMDQLGDTFGLLAFASDGRDDIRMTSIKNFGEAYDRDCRARLAGLVSGLSTRLGAA HHHHHHHHHCCHHEEEEEECCCCCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH LRHAGAVLGVATSSRKLLIVLTDGEPSDIDVSDPLDLIEDARRAALGLHAQGIDAYGVVL HHHHCCEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH GRAGAEAATRVFGRGNTMLVHRVEDLPARLSELYFRLARR CCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA