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The map label for this gene is pqqE [H]

Identifier: 146342632

GI number: 146342632

Start: 5997201

End: 5998394

Strand: Direct

Name: pqqE [H]

Synonym: BRADO5797

Alternate gene names: 146342632

Gene position: 5997201-5998394 (Clockwise)

Preceding gene: 146342631

Following gene: 146342633

Centisome position: 80.43

GC content: 65.91

Gene sequence:

>1194_bases
ATGACCGAGCTGACAGACACCACTGCGCAGATCGATAGCAATGACGGCCTCGCCGTGCTGGAGCGCCGCGGCTCCGTCGC
CGAGACCTTCGGCATTCCGCTCGCCGTGCTGCTCGAGCTCACGCATCGCTGCCCGCTGCAATGCCCCTATTGCTCCAACC
CGCTGGAGCTCGACCGCGCCGGCCAGGAGCTGACCACGGCCGAGTGGAAGAAGGTGCTGTCGGAGCTCGCCGAGATCGGC
GTGCTGCAGGTGCATTTCTCCGGCGGCGAGCCGACCGCGCGCAAGGACATCGTCGAGCTGGTCGCTCACGCCAATGATGT
CGGGCTCTACACCAATCTCATCACCTCGGCCGTGCTGCTGACGCGCGAGCGGCTGAAGGAGCTCGCCGATGCCGGCCTCT
GCCACGTGCAGATCAGCTTCCAGGGCAACGAGCCCGTCGTCGCCGACCGCGTCGGCGGCTACAAGGGCGGCCACGCCAAG
AAGCTCGAGGTCGCTAAGTGGACTCGCGAACTCGATCTGCCGCTGACGGTGAACGCCGTGATGCACCGGCAGAACCTGCA
CCAGCTGCCCGACATCATCCAGATGGCGGTCGATCTCGACGCGGACCGGCTGGAGGTCGCCAACGTGCAATATTACGGCT
GGGCCTTGAAGAACCGCGCCAGCCTGATGCCGACCTATCAGCAGCTCGAGGAGACCGACCGCCTCGTCGAGGAGGCCCGC
GAGCGGCTGAGGGGCACGCTGACGATCGACTATGTCGTGCCGGATTATTATGCGCTGCGGCCGAAGAAGTGCATGGGCGG
CTGGGGCCGGCAGTTCTTCAACATCTCGCCGTCCGGCAAGGTGCTGCCGTGCCACGCGGCCGAGAGCATCACCGGGCTCG
ACTTCATGTCGGTGCGCTCGAACAACTCGATCGCCTGGATCTGGCAGAATTCCGAAGCCTTCAACCGCTATCGCGGCACC
GGCTGGATGAGGGAACCGTGCAAGAGTTGCGAGTTCCGCGAGATCGATTTCGGCGGCTGCCGCTGCCAGGCCTTCGCGCT
GACCGGCGACGCCGCCAATACCGATCCCGCCTGCACCCTGTCGCCGCTGCACGAGAGCATCTTCAAGCAGGCCGAGCGCG
ATGCCGCCTCCGGTCAGGACCGCTTCCTGTATCGCAATTTTGCCGGCGGCACGCCCGAGAGCCACGATGCCTGA

Upstream 100 bases:

>100_bases
AGTATGCCGCGCCGCGCGACGTCATTGCCACCGATGTCGTCGCCATGCTGCAGGATCTCGCCGACAAGGGCTTTCTCACC
GAGGTTCGGGAGACGACATC

Downstream 100 bases:

>100_bases
CGCCGAAGCCGGCCGCGCCGCCGCGCGCCGCAACGATCCGTTCGCGCCGCTGACGTCGGAATGGCTCGACGTCTCCGGCG
GCCACCAGATCTATGTCGAG

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTELTDTTAQIDSNDGLAVLERRGSVAETFGIPLAVLLELTHRCPLQCPYCSNPLELDRAGQELTTAEWKKVLSELAEIG
VLQVHFSGGEPTARKDIVELVAHANDVGLYTNLITSAVLLTRERLKELADAGLCHVQISFQGNEPVVADRVGGYKGGHAK
KLEVAKWTRELDLPLTVNAVMHRQNLHQLPDIIQMAVDLDADRLEVANVQYYGWALKNRASLMPTYQQLEETDRLVEEAR
ERLRGTLTIDYVVPDYYALRPKKCMGGWGRQFFNISPSGKVLPCHAAESITGLDFMSVRSNNSIAWIWQNSEAFNRYRGT
GWMREPCKSCEFREIDFGGCRCQAFALTGDAANTDPACTLSPLHESIFKQAERDAASGQDRFLYRNFAGGTPESHDA

Sequences:

>Translated_397_residues
MTELTDTTAQIDSNDGLAVLERRGSVAETFGIPLAVLLELTHRCPLQCPYCSNPLELDRAGQELTTAEWKKVLSELAEIG
VLQVHFSGGEPTARKDIVELVAHANDVGLYTNLITSAVLLTRERLKELADAGLCHVQISFQGNEPVVADRVGGYKGGHAK
KLEVAKWTRELDLPLTVNAVMHRQNLHQLPDIIQMAVDLDADRLEVANVQYYGWALKNRASLMPTYQQLEETDRLVEEAR
ERLRGTLTIDYVVPDYYALRPKKCMGGWGRQFFNISPSGKVLPCHAAESITGLDFMSVRSNNSIAWIWQNSEAFNRYRGT
GWMREPCKSCEFREIDFGGCRCQAFALTGDAANTDPACTLSPLHESIFKQAERDAASGQDRFLYRNFAGGTPESHDA
>Mature_396_residues
TELTDTTAQIDSNDGLAVLERRGSVAETFGIPLAVLLELTHRCPLQCPYCSNPLELDRAGQELTTAEWKKVLSELAEIGV
LQVHFSGGEPTARKDIVELVAHANDVGLYTNLITSAVLLTRERLKELADAGLCHVQISFQGNEPVVADRVGGYKGGHAKK
LEVAKWTRELDLPLTVNAVMHRQNLHQLPDIIQMAVDLDADRLEVANVQYYGWALKNRASLMPTYQQLEETDRLVEEARE
RLRGTLTIDYVVPDYYALRPKKCMGGWGRQFFNISPSGKVLPCHAAESITGLDFMSVRSNNSIAWIWQNSEAFNRYRGTG
WMREPCKSCEFREIDFGGCRCQAFALTGDAANTDPACTLSPLHESIFKQAERDAASGQDRFLYRNFAGGTPESHDA

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 44206; Mature: 44075

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELTDTTAQIDSNDGLAVLERRGSVAETFGIPLAVLLELTHRCPLQCPYCSNPLELDRA
CCCCCCCHHEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHC
GQELTTAEWKKVLSELAEIGVLQVHFSGGEPTARKDIVELVAHANDVGLYTNLITSAVLL
CCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TRERLKELADAGLCHVQISFQGNEPVVADRVGGYKGGHAKKLEVAKWTRELDLPLTVNAV
HHHHHHHHHCCCEEEEEEEECCCCCEEECCCCCCCCCCCCEEHHHHHHHHCCCCEEHHHH
MHRQNLHQLPDIIQMAVDLDADRLEVANVQYYGWALKNRASLMPTYQQLEETDRLVEEAR
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECEECCCCCCCCCHHHHHHHHHHHHHHHH
ERLRGTLTIDYVVPDYYALRPKKCMGGWGRQFFNISPSGKVLPCHAAESITGLDFMSVRS
HHHCCEEEEEEECCCCHHCCCHHHHCCCCHHEEEECCCCCEEEECCCCCCCCCEEEEEEC
NNSIAWIWQNSEAFNRYRGTGWMREPCKSCEFREIDFGGCRCQAFALTGDAANTDPACTL
CCCEEEEECCCHHHHHHCCCCCHHHHHHCCCCEECCCCCCEEEEEEEECCCCCCCCCCCH
SPLHESIFKQAERDAASGQDRFLYRNFAGGTPESHDA
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TELTDTTAQIDSNDGLAVLERRGSVAETFGIPLAVLLELTHRCPLQCPYCSNPLELDRA
CCCCCCHHEECCCCCEEEEECCCCHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHC
GQELTTAEWKKVLSELAEIGVLQVHFSGGEPTARKDIVELVAHANDVGLYTNLITSAVLL
CCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
TRERLKELADAGLCHVQISFQGNEPVVADRVGGYKGGHAKKLEVAKWTRELDLPLTVNAV
HHHHHHHHHCCCEEEEEEEECCCCCEEECCCCCCCCCCCCEEHHHHHHHHCCCCEEHHHH
MHRQNLHQLPDIIQMAVDLDADRLEVANVQYYGWALKNRASLMPTYQQLEETDRLVEEAR
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECEECCCCCCCCCHHHHHHHHHHHHHHHH
ERLRGTLTIDYVVPDYYALRPKKCMGGWGRQFFNISPSGKVLPCHAAESITGLDFMSVRS
HHHCCEEEEEEECCCCHHCCCHHHHCCCCHHEEEECCCCCEEEECCCCCCCCCEEEEEEC
NNSIAWIWQNSEAFNRYRGTGWMREPCKSCEFREIDFGGCRCQAFALTGDAANTDPACTL
CCCEEEEECCCHHHHHHCCCCCHHHHHHCCCCEECCCCCCEEEEEEEECCCCCCCCCCCH
SPLHESIFKQAERDAASGQDRFLYRNFAGGTPESHDA
HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]