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The map label for this gene is phnN [C]

Identifier: 146342197

GI number: 146342197

Start: 5557940

End: 5558581

Strand: Reverse

Name: phnN [C]

Synonym: BRADO5349

Alternate gene names: 146342197

Gene position: 5558581-5557940 (Counterclockwise)

Preceding gene: 146342198

Following gene: 146342196

Centisome position: 74.55

GC content: 65.89

Gene sequence:

>642_bases
ATGAGCGCGGCGTCGACTGGCTCGGATCACAACGCCCGCCTTGGTCCGGGCCGGCTGGTGCTCGTCGTCGGACCGAGCGG
CGCGGGCAAGGACACGTTGATCAATCTGGCGCGGGCTGCGTGCGACGACGACGACCGCATCGTGTTTCCGCAGCGGGTCG
TGACCCGTGAAGCGTCCACTTTCGAAGACAATCGTGAAATGAGCGAGGCCGCGTTCCGCGAGGCTCTCGCGTCCGGCGCG
TTCGCGCTGCATTGGACCGCGCACGGTCATTGCTACGGCGTGCCGCGCGCGATCAAGGACGATCTCGCCGCCGGTCGCAC
CGTCGTGGTGAACGTGTCGCGCACGGTCATCCCCGCGGCACGCCGCGACTATGCCGATGTCGTCGTCGTGAACATCACCG
CGCCGGCGGACGTGCTTGCGGAGCGGCTGGGCAAGCGGCATCGTCCGAGCGACACCGACATCGGTGAGCGGCTGCATCGG
ACCGTGGGCAACGAGTCGGTGATCGCTGACCTCACGATCAACAATGTCGGCGATCCCGCCACTCACGGACTCAGGCTGAT
CGAGGTGATCAAGGGATCCGATGCGAGTGCTTCGGCCGAGTTGATGGGAGCTGTGAACGATGTCGATCATCACCACCGTT
GA

Upstream 100 bases:

>100_bases
GCGAGATCGCTCCTGGCAAGCGCGCGGATCTGATCCGCGTTCACGTCGCCGGCGACCATGCCGTCGTACGCAGCGTCTGG
CGGGAAGGGCTGCGTGTGGC

Downstream 100 bases:

>100_bases
GCAACTCGAGGCGATCTACGGCGAGACCGGACTGGCGTCGACGGCCAAGGTCGCCGATCGGGTGACGCCGCAGTATCGGG
TGATGATCGAGAAATCGCCG

Product: putative ATP-binding component, PhnN protein

Products: NA

Alternate protein names: TdRPase [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSAASTGSDHNARLGPGRLVLVVGPSGAGKDTLINLARAACDDDDRIVFPQRVVTREASTFEDNREMSEAAFREALASGA
FALHWTAHGHCYGVPRAIKDDLAAGRTVVVNVSRTVIPAARRDYADVVVVNITAPADVLAERLGKRHRPSDTDIGERLHR
TVGNESVIADLTINNVGDPATHGLRLIEVIKGSDASASAELMGAVNDVDHHHR

Sequences:

>Translated_213_residues
MSAASTGSDHNARLGPGRLVLVVGPSGAGKDTLINLARAACDDDDRIVFPQRVVTREASTFEDNREMSEAAFREALASGA
FALHWTAHGHCYGVPRAIKDDLAAGRTVVVNVSRTVIPAARRDYADVVVVNITAPADVLAERLGKRHRPSDTDIGERLHR
TVGNESVIADLTINNVGDPATHGLRLIEVIKGSDASASAELMGAVNDVDHHHR
>Mature_212_residues
SAASTGSDHNARLGPGRLVLVVGPSGAGKDTLINLARAACDDDDRIVFPQRVVTREASTFEDNREMSEAAFREALASGAF
ALHWTAHGHCYGVPRAIKDDLAAGRTVVVNVSRTVIPAARRDYADVVVVNITAPADVLAERLGKRHRPSDTDIGERLHRT
VGNESVIADLTINNVGDPATHGLRLIEVIKGSDASASAELMGAVNDVDHHHR

Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]

COG id: COG3709

COG function: function code P; Uncharacterized component of phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790532, Length=146, Percent_Identity=35.6164383561644, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR020072
- InterPro:   IPR008145
- InterPro:   IPR012699
- InterPro:   IPR013102
- InterPro:   IPR000053
- InterPro:   IPR017872
- InterPro:   IPR013466 [H]

Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3; PF07831 PYNP_C [H]

EC number: =2.4.2.4 [H]

Molecular weight: Translated: 22694; Mature: 22562

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAASTGSDHNARLGPGRLVLVVGPSGAGKDTLINLARAACDDDDRIVFPQRVVTREAST
CCCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHCCHH
FEDNREMSEAAFREALASGAFALHWTAHGHCYGVPRAIKDDLAAGRTVVVNVSRTVIPAA
HHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHHHCCCEEEEEECCCCCCCC
RRDYADVVVVNITAPADVLAERLGKRHRPSDTDIGERLHRTVGNESVIADLTINNVGDPA
CCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCH
THGLRLIEVIKGSDASASAELMGAVNDVDHHHR
HHHHEEEEEECCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAASTGSDHNARLGPGRLVLVVGPSGAGKDTLINLARAACDDDDRIVFPQRVVTREAST
CCCCCCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHCCHH
FEDNREMSEAAFREALASGAFALHWTAHGHCYGVPRAIKDDLAAGRTVVVNVSRTVIPAA
HHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHHHCCCEEEEEECCCCCCCC
RRDYADVVVVNITAPADVLAERLGKRHRPSDTDIGERLHRTVGNESVIADLTINNVGDPA
CCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCH
THGLRLIEVIKGSDASASAELMGAVNDVDHHHR
HHHHEEEEEECCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA